RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP1	YNL189W	COQ4	O13525	335 aa		4.69	□□□□□ -1.66
SRP1	YNL189W	CYC7	P00045	113 aa		4.69	□□□□□ -1.66
SRP1	YNL189W	BI4	P03879	638 aa		4.69	□□□□□ -1.66
SRP1	YNL189W	CAN1	P04817	590 aa		4.69	□□□□□ -1.66
SRP1	YNL189W	TOP3	P13099	656 aa		4.69	□□□□□ -1.66
SRP1	YNL189W	PRO1	P32264	428 aa		4.69	□□□□□ -1.66
SRP1	YNL189W	BET3	P36149	193 aa		4.69	□□□□□ -1.66
SRP1	YNL189W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
SRP1	YNL189W	TAF8	Q03750	510 aa		4.69	□□□□□ -1.66
SRP1	YNL189W	FPR4	Q06205	392 aa	Predicted RBP	4.69	□□□□□ -1.66
SRP1	YNL189W	RSC58	Q07979	502 aa		4.69	□□□□□ -1.66
SRP1	YNL189W	YOR059C	Q08448	450 aa	Known RBP	4.69	□□□□□ -1.66
SRP1	YNL189W	HBN1	Q96VH4	193 aa		4.69	□□□□□ -1.66
SRP1	YNL189W	MDL2	P33311	773 aa		4.68	□□□□□ -1.66
SRP1	YNL189W	GEM1	P39722	662 aa		4.68	□□□□□ -1.66
SRP1	YNL189W	NUP82	P40368	713 aa		4.68	□□□□□ -1.66
SRP1	YNL189W	AAR2	P32357	355 aa	Predicted RBP	4.68	□□□□□ -1.66
SRP1	YNL189W	AIM26	P32858	118 aa		4.68	□□□□□ -1.66
SRP1	YNL189W	ABZ1	P37254	787 aa	Predicted RBP	4.68	□□□□□ -1.66
SRP1	YNL189W	CCC2	P38995	1004 aa		4.68	□□□□□ -1.66
SRP1	YNL189W	PIK1	P39104	1066 aa		4.68	□□□□□ -1.66
SRP1	YNL189W	MTC3	P53077	123 aa		4.68	□□□□□ -1.66
SRP1	YNL189W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
SRP1	YNL189W	GLT1	Q12680	2145 aa	Known RBP	4.67	□□□□□ -1.66
SRP1	YNL189W	PRP9	P19736	530 aa	Known RBP	4.67	□□□□□ -1.66
SRP1	YNL189W	NPP1	P25353	742 aa		4.67	□□□□□ -1.66
SRP1	YNL189W	SRO9	P25567	434 aa	Known RBP	4.67	□□□□□ -1.66
SRP1	YNL189W	CDC12	P32468	407 aa	Known RBP	4.67	□□□□□ -1.66
SRP1	YNL189W	AFR1	P33304	620 aa		4.67	□□□□□ -1.66
SRP1	YNL189W	SNF7	P39929	240 aa	Known RBP	4.67	□□□□□ -1.66
SRP1	YNL189W	SAH1	P39954	449 aa	Known RBP	4.67	□□□□□ -1.66
SRP1	YNL189W	NPP2	P39997	493 aa		4.67	□□□□□ -1.66
SRP1	YNL189W	ALO1	P54783	526 aa	Known RBP	4.67	□□□□□ -1.66
SRP1	YNL189W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
SRP1	YNL189W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
SRP1	YNL189W	YPR071W	Q12346	211 aa		4.67	□□□□□ -1.66
SRP1	YNL189W	CCZ1	P38273	704 aa		4.66	□□□□□ -1.66
SRP1	YNL189W	PPH3	P32345	308 aa		4.65	□□□□□ -1.66
SRP1	YNL189W	PPG1	P32838	368 aa		4.65	□□□□□ -1.66
SRP1	YNL189W	TOS1	P38288	455 aa		4.65	□□□□□ -1.66
SRP1	YNL189W	CTH1	P47976	325 aa		4.65	□□□□□ -1.66
SRP1	YNL189W	MED7	Q08278	222 aa		4.65	□□□□□ -1.66
SRP1	YNL189W	RSB1	Q08417	382 aa		4.65	□□□□□ -1.66
SRP1	YNL189W	LPX1	Q12405	387 aa	Known RBP	4.65	□□□□□ -1.66
SRP1	YNL189W	MSD1	P15179	658 aa	Known RBP	4.64	□□□□□ -1.67
SRP1	YNL189W	GAL11	P19659	1081 aa		4.64	□□□□□ -1.67
SRP1	YNL189W	YRO2	P38079	344 aa		4.64	□□□□□ -1.67
SRP1	YNL189W	GIC1	P38785	314 aa		4.64	□□□□□ -1.67
SRP1	YNL189W	HFM1	P51979	1187 aa		4.64	□□□□□ -1.67
SRP1	YNL189W	ALG12	P53730	551 aa		4.64	□□□□□ -1.67
SRP1	YNL189W	XYL2	Q07993	356 aa		4.64	□□□□□ -1.67
SRP1	YNL189W	MDM38	Q08179	573 aa		4.64	□□□□□ -1.67
SRP1	YNL189W	ADP1	P25371	1049 aa		4.64	□□□□□ -1.67
SRP1	YNL189W	CHZ1	P40019	153 aa	Predicted RBP	4.64	□□□□□ -1.67
SRP1	YNL189W	HUL4	P40985	892 aa		4.64	□□□□□ -1.67
SRP1	YNL189W	SFB2	P53953	876 aa		4.64	□□□□□ -1.67
SRP1	YNL189W	SVS1	Q12254	260 aa		4.64	□□□□□ -1.67
SRP1	YNL189W	PHO8	P11491	566 aa		4.63	□□□□□ -1.67
SRP1	YNL189W	ACE2	P21192	770 aa		4.63	□□□□□ -1.67
SRP1	YNL189W	GGA2	P38817	585 aa	Known RBP	4.63	□□□□□ -1.67
SRP1	YNL189W	SRP1	Q02821	542 aa	Known RBP	4.63	□□□□□ -1.67
SRP1	YNL189W	BUL2	Q03758	920 aa	Known RBP	4.63	□□□□□ -1.67
SRP1	YNL189W	YDL124W	Q07551	312 aa	Known RBP	4.63	□□□□□ -1.67
SRP1	YNL189W	RIB2	Q12362	591 aa	Known RBP	4.63	□□□□□ -1.67
SRP1	YNL189W	NSI1	Q12457	570 aa		4.63	□□□□□ -1.67
SRP1	YNL189W	SIT1	P39980	628 aa		4.62	□□□□□ -1.67
SRP1	YNL189W	TOK1	P40310	691 aa		4.62	□□□□□ -1.67
SRP1	YNL189W	NBA1	Q08229	501 aa	Known RBP	4.62	□□□□□ -1.67
SRP1	YNL189W	SPS1	P08458	490 aa		4.61	□□□□□ -1.67
SRP1	YNL189W	HSP78	P33416	811 aa		4.61	□□□□□ -1.67
SRP1	YNL189W	PET10	P36139	283 aa		4.61	□□□□□ -1.67
SRP1	YNL189W	TSL1	P38427	1098 aa	Known RBP	4.61	□□□□□ -1.67
SRP1	YNL189W	NMD2	P38798	1089 aa	Known RBP	4.61	□□□□□ -1.67
SRP1	YNL189W	OSW7	P43611	510 aa		4.61	□□□□□ -1.67
SRP1	YNL189W	MAL11	P53048	616 aa		4.61	□□□□□ -1.67
SRP1	YNL189W	ATG13	Q06628	738 aa		4.61	□□□□□ -1.67
SRP1	YNL189W	ADE8	P04161	214 aa		4.61	□□□□□ -1.67
SRP1	YNL189W	TOM70	P07213	617 aa	Known RBP	4.61	□□□□□ -1.67
SRP1	YNL189W	CDC11	P32458	415 aa		4.61	□□□□□ -1.67
SRP1	YNL189W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
SRP1	YNL189W	SEC26	P41810	973 aa	Known RBP	4.61	□□□□□ -1.67
SRP1	YNL189W	UBP6	P43593	499 aa	Known RBP	4.61	□□□□□ -1.67
SRP1	YNL189W	SRT1	Q03175	343 aa		4.61	□□□□□ -1.67
SRP1	YNL189W	BRE4	Q07660	1125 aa		4.61	□□□□□ -1.67
SRP1	YNL189W	AIM44	Q99299	758 aa		4.61	□□□□□ -1.67
SRP1	YNL189W	THS1	P04801	734 aa	Known RBP	4.6	□□□□□ -1.67
SRP1	YNL189W	MET6	P05694	767 aa	Known RBP	4.6	□□□□□ -1.67
SRP1	YNL189W	APL1	P27351	700 aa		4.6	□□□□□ -1.67
SRP1	YNL189W	THI4	P32318	326 aa		4.6	□□□□□ -1.67
SRP1	YNL189W	OMA1	P36163	345 aa		4.6	□□□□□ -1.67
SRP1	YNL189W	RFC5	P38251	354 aa		4.6	□□□□□ -1.67
SRP1	YNL189W	INP52	P50942	1183 aa		4.6	□□□□□ -1.67
SRP1	YNL189W	SRM1	P21827	482 aa		4.59	□□□□□ -1.67
SRP1	YNL189W	LIP5	P32875	414 aa		4.59	□□□□□ -1.67
SRP1	YNL189W	DOM34	P33309	386 aa		4.59	□□□□□ -1.67
SRP1	YNL189W	RRP14	P36080	434 aa	Known RBP	4.59	□□□□□ -1.67
SRP1	YNL189W	ETP1	P38748	585 aa	Known RBP	4.59	□□□□□ -1.67
SRP1	YNL189W	GDH3	P39708	457 aa		4.59	□□□□□ -1.67
SRP1	YNL189W	RRT14	P40470	206 aa		4.59	□□□□□ -1.67
SRP1	YNL189W	TPO2	P53283	614 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms