RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W YLR422WQ06409 1932 aa2.76□□□□□ -1.97
UBP15YMR304W RPB4P20433 221 aaPredicted RBP2.76□□□□□ -1.97
UBP15YMR304W PPX1P38698 397 aa2.76□□□□□ -1.97
UBP15YMR304W SLX8P40072 274 aa2.76□□□□□ -1.97
UBP15YMR304W APL6P46682 809 aa2.76□□□□□ -1.97
UBP15YMR304W YPP1P46951 817 aa2.76□□□□□ -1.97
UBP15YMR304W ALT1P52893 592 aa2.76□□□□□ -1.97
UBP15YMR304W NNF2P53253 936 aa2.76□□□□□ -1.97
UBP15YMR304W CAF120P53836 1060 aa2.76□□□□□ -1.97
UBP15YMR304W VPS30Q02948 557 aa2.76□□□□□ -1.97
UBP15YMR304W OPT2Q06593 877 aa2.76□□□□□ -1.97
UBP15YMR304W INP54Q08227 384 aaKnown RBP2.76□□□□□ -1.97
UBP15YMR304W DPH5P32469 300 aaPredicted RBP2.76□□□□□ -1.97
UBP15YMR304W HAT1Q12341 374 aa2.76□□□□□ -1.97
UBP15YMR304W RIF1P29539 1916 aa2.76□□□□□ -1.97
UBP15YMR304W ADE3P07245 946 aaKnown RBP2.75□□□□□ -1.97
UBP15YMR304W SPT5P27692 1063 aaKnown RBP2.75□□□□□ -1.97
UBP15YMR304W OCT1P35999 772 aa2.75□□□□□ -1.97
UBP15YMR304W RRP14P36080 434 aaKnown RBP2.75□□□□□ -1.97
UBP15YMR304W DFG5Q05031 458 aa2.75□□□□□ -1.97
UBP15YMR304W SLX4Q12098 748 aa2.75□□□□□ -1.97
UBP15YMR304W PSH1Q12161 406 aa2.75□□□□□ -1.97
UBP15YMR304W RPP0P05317 312 aaKnown RBP2.75□□□□□ -1.97
UBP15YMR304W RAP1P11938 827 aa2.75□□□□□ -1.97
UBP15YMR304W MIP1P15801 1254 aa2.75□□□□□ -1.97
UBP15YMR304W PPG1P32838 368 aa2.75□□□□□ -1.97
UBP15YMR304W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
UBP15YMR304W NAB3P38996 802 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
UBP15YMR304W LYS14P40971 790 aa2.75□□□□□ -1.97
UBP15YMR304W NUP85P46673 744 aa2.75□□□□□ -1.97
UBP15YMR304W INP52P50942 1183 aa2.75□□□□□ -1.97
UBP15YMR304W RTC4P53850 401 aa2.75□□□□□ -1.97
UBP15YMR304W RRB1Q04225 511 aaKnown RBP2.75□□□□□ -1.97
UBP15YMR304W GYL1Q04322 720 aa2.75□□□□□ -1.97
UBP15YMR304W MFB1Q04922 465 aa2.75□□□□□ -1.97
UBP15YMR304W MCP2Q06567 569 aa2.75□□□□□ -1.97
UBP15YMR304W ARR1Q06596 294 aa2.75□□□□□ -1.97
UBP15YMR304W CDC48P25694 835 aaKnown RBP2.75□□□□□ -1.97
UBP15YMR304W GUT2P32191 649 aa2.75□□□□□ -1.97
UBP15YMR304W GEF1P37020 779 aa2.75□□□□□ -1.97
UBP15YMR304W HSM3P38348 480 aa2.75□□□□□ -1.97
UBP15YMR304W ORC1P54784 914 aaPredicted RBP2.75□□□□□ -1.97
UBP15YMR304W WHI4Q07655 649 aaKnown RBP2.75□□□□□ -1.97
UBP15YMR304W WHI5Q12416 295 aa2.75□□□□□ -1.97
UBP15YMR304W MAK16P10962 306 aaPredicted RBP2.74□□□□□ -1.97
UBP15YMR304W MNR2P35724 969 aa2.74□□□□□ -1.97
UBP15YMR304W EMW1P42842 904 aaKnown RBP2.74□□□□□ -1.97
UBP15YMR304W AAD14P42884 376 aa2.74□□□□□ -1.97
UBP15YMR304W CIT3P43635 486 aa2.74□□□□□ -1.97
UBP15YMR304W SCW11P53189 542 aa2.74□□□□□ -1.97
UBP15YMR304W YGR035CP53222 116 aa2.74□□□□□ -1.97
UBP15YMR304W LSC2P53312 427 aa2.74□□□□□ -1.97
UBP15YMR304W BNI5P53890 448 aaKnown RBP2.74□□□□□ -1.97
UBP15YMR304W MDM1Q01846 1127 aa2.74□□□□□ -1.97
UBP15YMR304W YMR102CQ03177 834 aa2.74□□□□□ -1.97
UBP15YMR304W EMI2Q04409 500 aaKnown RBP2.74□□□□□ -1.97
UBP15YMR304W BDS1Q08347 646 aa2.74□□□□□ -1.97
UBP15YMR304W YDR034W-BQ6Q5X2 51 aa2.74□□□□□ -1.97
UBP15YMR304W VPS5Q92331 675 aa2.74□□□□□ -1.97
UBP15YMR304W STE6P12866 1290 aa2.74□□□□□ -1.97
UBP15YMR304W BUD2P33314 1104 aa2.74□□□□□ -1.97
UBP15YMR304W JHD1P40034 492 aa2.74□□□□□ -1.97
UBP15YMR304W NIT1P40447 199 aa2.74□□□□□ -1.97
UBP15YMR304W ATG1P53104 897 aa2.74□□□□□ -1.97
UBP15YMR304W GDE1Q02979 1223 aa2.74□□□□□ -1.97
UBP15YMR304W RSC2Q06488 889 aa2.74□□□□□ -1.97
UBP15YMR304W RLP24Q07915 199 aaKnown RBP2.74□□□□□ -1.97
UBP15YMR304W MLH2Q07980 695 aa2.74□□□□□ -1.97
UBP15YMR304W STB3Q12427 513 aa2.74□□□□□ -1.97
UBP15YMR304W TRS33Q99394 268 aa2.74□□□□□ -1.97
UBP15YMR304W VMA6P32366 345 aaKnown RBP2.74□□□□□ -1.97
UBP15YMR304W ASF1P32447 279 aa2.74□□□□□ -1.97
UBP15YMR304W RGT1P32862 1170 aa2.74□□□□□ -1.97
UBP15YMR304W YAP1801P38856 637 aa2.74□□□□□ -1.97
UBP15YMR304W SEC9P40357 651 aa2.74□□□□□ -1.97
UBP15YMR304W NOP15P53927 220 aaPredicted RBP2.74□□□□□ -1.97
UBP15YMR304W TFB3Q03290 321 aa2.74□□□□□ -1.97
UBP15YMR304W MOT1P32333 1867 aa2.73□□□□□ -1.97
UBP15YMR304W CMP2P14747 604 aa2.73□□□□□ -1.97
UBP15YMR304W COY1P34237 679 aa2.73□□□□□ -1.97
UBP15YMR304W PSY4P38193 441 aa2.73□□□□□ -1.97
UBP15YMR304W KSP1P38691 1029 aaKnown RBP2.73□□□□□ -1.97
UBP15YMR304W YHB1P39676 399 aaKnown RBP2.73□□□□□ -1.97
UBP15YMR304W VPS8P39702 1274 aa2.73□□□□□ -1.97
UBP15YMR304W SIT1P39980 628 aa2.73□□□□□ -1.97
UBP15YMR304W YJL055WP47044 245 aa2.73□□□□□ -1.97
UBP15YMR304W SRP1Q02821 542 aaKnown RBP2.73□□□□□ -1.97
UBP15YMR304W MMR1Q06324 491 aa2.73□□□□□ -1.97
UBP15YMR304W PDI1P17967 522 aaKnown RBP2.73□□□□□ -1.97
UBP15YMR304W SUI2P20459 304 aaKnown RBP2.73□□□□□ -1.97
UBP15YMR304W ISF1P32488 338 aa2.73□□□□□ -1.97
UBP15YMR304W SSE1P32589 693 aaKnown RBP2.73□□□□□ -1.97
UBP15YMR304W MMF1P40185 145 aaKnown RBP2.73□□□□□ -1.97
UBP15YMR304W HYR1P40581 163 aaKnown RBP2.73□□□□□ -1.97
UBP15YMR304W TRM44Q02648 567 aaKnown RBP2.73□□□□□ -1.97
UBP15YMR304W RRN11Q04712 507 aa2.73□□□□□ -1.97
UBP15YMR304W ARV1Q06541 321 aa2.73□□□□□ -1.97
UBP15YMR304W AOS1Q06624 347 aa2.73□□□□□ -1.97
UBP15YMR304W SNU66Q12420 587 aaPredicted RBP2.73□□□□□ -1.97
UBP15YMR304W ADH4P10127 382 aa2.73□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms