RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeast

Gene TIF11, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF11	YMR260C	MET10	P39692	1035 aa		4.31	□□□□□ -1.72
TIF11	YMR260C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.31	□□□□□ -1.72	not detected
TIF11	YMR260C	TRP2	P00899	507 aa	Known RBP	4.3	□□□□□ -1.72
TIF11	YMR260C	BI4	P03879	638 aa		4.3	□□□□□ -1.72
TIF11	YMR260C	CDC34	P14682	295 aa		4.3	□□□□□ -1.72
TIF11	YMR260C	LST4	P34239	828 aa		4.3	□□□□□ -1.72
TIF11	YMR260C	MNR2	P35724	969 aa		4.3	□□□□□ -1.72
TIF11	YMR260C	MXR1	P40029	184 aa		4.3	□□□□□ -1.72
TIF11	YMR260C	MNN10	P50108	393 aa	Known RBP	4.3	□□□□□ -1.72
TIF11	YMR260C	EEB1	Q02891	456 aa		4.3	□□□□□ -1.72
TIF11	YMR260C	URN1	Q06525	465 aa	Known RBP	4.3	□□□□□ -1.72
TIF11	YMR260C	NOP12	Q08208	459 aa	Known RBP	4.3	□□□□□ -1.72
TIF11	YMR260C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.3	□□□□□ -1.72	not detected
TIF11	YMR260C	RKM4	Q12504	494 aa		4.3	□□□□□ -1.72
TIF11	YMR260C	DBP2	P24783	546 aa	Known RBP	4.29	□□□□□ -1.72
TIF11	YMR260C	TRM2	P33753	639 aa		4.29	□□□□□ -1.72
TIF11	YMR260C	YLL058W	Q12198	575 aa		4.29	□□□□□ -1.72
TIF11	YMR260C	RPP2A	P05319	106 aa	Known RBP	4.28	□□□□□ -1.72
TIF11	YMR260C	PEP7	P32609	515 aa		4.28	□□□□□ -1.72
TIF11	YMR260C	MND2	P40577	368 aa		4.28	□□□□□ -1.72
TIF11	YMR260C	HFM1	P51979	1187 aa		4.28	□□□□□ -1.72
TIF11	YMR260C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
TIF11	YMR260C	YAP6	Q03935	383 aa		4.28	□□□□□ -1.72
TIF11	YMR260C	TMA10	Q06177	86 aa		4.28	□□□□□ -1.72
TIF11	YMR260C	ADY3	Q07732	790 aa		4.28	□□□□□ -1.72
TIF11	YMR260C	PUS9	Q12069	462 aa		4.28	□□□□□ -1.72
TIF11	YMR260C	EMC1	P25574	760 aa		4.27	□□□□□ -1.73
TIF11	YMR260C	PET112	P33893	541 aa		4.27	□□□□□ -1.73
TIF11	YMR260C	MTC3	P53077	123 aa		4.27	□□□□□ -1.73
TIF11	YMR260C	YLR224W	Q05947	369 aa		4.27	□□□□□ -1.73
TIF11	YMR260C	SPP382	Q06411	708 aa	Predicted RBP	4.27	□□□□□ -1.73
TIF11	YMR260C	YPL066W	Q12194	479 aa		4.27	□□□□□ -1.73
TIF11	YMR260C	NTO1	Q12311	748 aa		4.27	□□□□□ -1.73
TIF11	YMR260C	PMA1	P05030	918 aa	Known RBP	4.26	□□□□□ -1.73
TIF11	YMR260C	INO1	P11986	533 aa		4.26	□□□□□ -1.73
TIF11	YMR260C	HCM1	P25364	564 aa		4.26	□□□□□ -1.73
TIF11	YMR260C	PMI40	P29952	429 aa	Known RBP	4.26	□□□□□ -1.73
TIF11	YMR260C	DCG1	P32460	244 aa		4.26	□□□□□ -1.73
TIF11	YMR260C	SNF7	P39929	240 aa	Known RBP	4.26	□□□□□ -1.73
TIF11	YMR260C	TYW3	P53177	273 aa		4.26	□□□□□ -1.73
TIF11	YMR260C	OYE2	Q03558	400 aa	Known RBP	4.26	□□□□□ -1.73
TIF11	YMR260C	PNS1	Q12412	539 aa		4.26	□□□□□ -1.73
TIF11	YMR260C	YKL107W	P34251	309 aa		4.25	□□□□□ -1.73
TIF11	YMR260C	SIP5	P40210	489 aa	Known RBP	4.25	□□□□□ -1.73
TIF11	YMR260C	MET12	P46151	657 aa		4.25	□□□□□ -1.73
TIF11	YMR260C	MSE1	P48525	536 aa		4.25	□□□□□ -1.73
TIF11	YMR260C	MCM6	P53091	1017 aa	Known RBP	4.25	□□□□□ -1.73
TIF11	YMR260C	GIS1	Q03833	894 aa		4.25	□□□□□ -1.73
TIF11	YMR260C	TPO1	Q07824	586 aa		4.25	□□□□□ -1.73
TIF11	YMR260C	YAP1801	P38856	637 aa		4.24	□□□□□ -1.73
TIF11	YMR260C	GTF1	P53260	183 aa	Predicted RBP	4.24	□□□□□ -1.73
TIF11	YMR260C	SPO20	Q04359	397 aa		4.24	□□□□□ -1.73
TIF11	YMR260C	POA1	P38218	177 aa		4.23	□□□□□ -1.73
TIF11	YMR260C	ZRG8	P40021	1076 aa		4.23	□□□□□ -1.73
TIF11	YMR260C	IOC3	P43596	787 aa		4.23	□□□□□ -1.73
TIF11	YMR260C	CHA4	P43634	648 aa		4.23	□□□□□ -1.73
TIF11	YMR260C	YGR053C	P53234	283 aa		4.23	□□□□□ -1.73
TIF11	YMR260C	XYL2	Q07993	356 aa		4.23	□□□□□ -1.73
TIF11	YMR260C	MDM38	Q08179	573 aa		4.23	□□□□□ -1.73
TIF11	YMR260C	HIS5	P07172	385 aa		4.22	□□□□□ -1.73
TIF11	YMR260C	FUN30	P31380	1131 aa		4.22	□□□□□ -1.73
TIF11	YMR260C	MOT2	P34909	587 aa	Known RBP	4.22	□□□□□ -1.73
TIF11	YMR260C	CHS7	P38843	316 aa		4.22	□□□□□ -1.73
TIF11	YMR260C	YGL176C	P46945	554 aa		4.22	□□□□□ -1.73
TIF11	YMR260C	HRQ1	Q05549	1077 aa		4.22	□□□□□ -1.73
TIF11	YMR260C	OSW2	Q12202	724 aa		4.22	□□□□□ -1.73
TIF11	YMR260C	NAP1	P25293	417 aa	Known RBP	4.21	□□□□□ -1.74
TIF11	YMR260C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
TIF11	YMR260C	DEF1	P35732	738 aa	Known RBP	4.21	□□□□□ -1.74
TIF11	YMR260C	YKL151C	P36059	337 aa		4.21	□□□□□ -1.74
TIF11	YMR260C	AIM21	P40563	679 aa		4.21	□□□□□ -1.74
TIF11	YMR260C	KRI1	P42846	591 aa	Known RBP	4.21	□□□□□ -1.74
TIF11	YMR260C	GCV2	P49095	1034 aa		4.21	□□□□□ -1.74
TIF11	YMR260C	EXG2	P52911	562 aa		4.21	□□□□□ -1.74
TIF11	YMR260C	SLI1	P53304	468 aa		4.21	□□□□□ -1.74
TIF11	YMR260C	SRT1	Q03175	343 aa		4.21	□□□□□ -1.74
TIF11	YMR260C	CDA1	Q06702	301 aa		4.21	□□□□□ -1.74
TIF11	YMR260C	RPC82	P32349	654 aa		4.2	□□□□□ -1.74
TIF11	YMR260C	GIC1	P38785	314 aa		4.2	□□□□□ -1.74
TIF11	YMR260C	PLB1	P39105	664 aa		4.2	□□□□□ -1.74
TIF11	YMR260C	YGR012W	P53206	393 aa		4.2	□□□□□ -1.74
TIF11	YMR260C	SUN4	P53616	420 aa		4.2	□□□□□ -1.74
TIF11	YMR260C	TAD3	Q9URQ3	322 aa		4.2	□□□□□ -1.74
TIF11	YMR260C	SPE1	P08432	466 aa		4.19	□□□□□ -1.74
TIF11	YMR260C	HSF1	P10961	833 aa		4.19	□□□□□ -1.74
TIF11	YMR260C	ECM21	P38167	1117 aa	Known RBP	4.19	□□□□□ -1.74
TIF11	YMR260C	URM1	P40554	99 aa	Predicted RBP	4.19	□□□□□ -1.74
TIF11	YMR260C	PHO23	P50947	330 aa		4.19	□□□□□ -1.74
TIF11	YMR260C	CTF4	Q01454	927 aa		4.19	□□□□□ -1.74
TIF11	YMR260C	ENA1	P13587	1091 aa		4.18	□□□□□ -1.74
TIF11	YMR260C	CLN2	P20438	545 aa		4.18	□□□□□ -1.74
TIF11	YMR260C	AGP1	P25376	633 aa		4.18	□□□□□ -1.74
TIF11	YMR260C	SBA1	P28707	216 aa	Known RBP	4.18	□□□□□ -1.74
TIF11	YMR260C	CDC12	P32468	407 aa	Known RBP	4.18	□□□□□ -1.74
TIF11	YMR260C	ATG19	P35193	415 aa		4.18	□□□□□ -1.74
TIF11	YMR260C	FAA4	P47912	694 aa	Known RBP	4.18	□□□□□ -1.74
TIF11	YMR260C	ENA2	Q01896	1091 aa		4.18	□□□□□ -1.74
TIF11	YMR260C	YLR225C	Q05948	407 aa	Known RBP	4.18	□□□□□ -1.74
TIF11	YMR260C	KCS1	Q12494	1050 aa		4.18	□□□□□ -1.74
TIF11	YMR260C	ENA5	Q12691	1091 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms