RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C GPT2P36148 743 aa1.1□□□□□ -2.23
RKR1YMR247C CCC2P38995 1004 aa1.1□□□□□ -2.23
RKR1YMR247C TED1P40533 473 aa1.1□□□□□ -2.23
RKR1YMR247C GYP8P43570 497 aa1.1□□□□□ -2.23
RKR1YMR247C RIA1P53893 1110 aa1.1□□□□□ -2.23
RKR1YMR247C YLR281CQ05863 155 aa1.1□□□□□ -2.23
RKR1YMR247C OMS1Q06668 471 aa1.1□□□□□ -2.23
RKR1YMR247C ACK1Q07622 623 aaPredicted RBP1.1□□□□□ -2.23
RKR1YMR247C PPM2Q08282 695 aa1.1□□□□□ -2.23
RKR1YMR247C PMA1P05030 918 aaKnown RBP1.1□□□□□ -2.23
RKR1YMR247C DMC1P25453 334 aa1.1□□□□□ -2.23
RKR1YMR247C YCR015CP25616 317 aa1.1□□□□□ -2.23
RKR1YMR247C NTH1P32356 751 aa1.1□□□□□ -2.23
RKR1YMR247C SLA2P33338 968 aa1.1□□□□□ -2.23
RKR1YMR247C KTR2P33550 425 aa1.1□□□□□ -2.23
RKR1YMR247C EMC3P36039 253 aa1.1□□□□□ -2.23
RKR1YMR247C TRZ1P36159 838 aaPredicted RBP1.1□□□□□ -2.23
RKR1YMR247C TOS1P38288 455 aa1.1□□□□□ -2.23
RKR1YMR247C YAP1801P38856 637 aa1.1□□□□□ -2.23
RKR1YMR247C HXT13P39924 564 aa1.1□□□□□ -2.23
RKR1YMR247C LSB3P43603 459 aaKnown RBP1.1□□□□□ -2.23
RKR1YMR247C KIP3P53086 805 aaKnown RBP1.1□□□□□ -2.23
RKR1YMR247C VPS62P53285 467 aa1.1□□□□□ -2.23
RKR1YMR247C HXT17P53631 564 aa1.1□□□□□ -2.23
RKR1YMR247C HXT15P54854 567 aa1.1□□□□□ -2.23
RKR1YMR247C MCM21Q06675 368 aa1.1□□□□□ -2.23
RKR1YMR247C VHS3Q08438 674 aa1.1□□□□□ -2.23
RKR1YMR247C BMS1Q08965 1183 aaKnown RBP1.1□□□□□ -2.23
RKR1YMR247C FRT1Q99332 602 aa1.1□□□□□ -2.23
RKR1YMR247C MET3P08536 511 aa1.1□□□□□ -2.23
RKR1YMR247C YCK2P23292 546 aaKnown RBP1.1□□□□□ -2.23
RKR1YMR247C TSR4P25040 408 aa1.1□□□□□ -2.23
RKR1YMR247C KIP1P28742 1111 aa1.1□□□□□ -2.23
RKR1YMR247C SWC3P31376 625 aa1.1□□□□□ -2.23
RKR1YMR247C REC104P33323 182 aa1.1□□□□□ -2.23
RKR1YMR247C STO1P34160 861 aaKnown RBP1.1□□□□□ -2.23
RKR1YMR247C SAP190P36123 1033 aa1.1□□□□□ -2.23
RKR1YMR247C ALG3P38179 458 aa1.1□□□□□ -2.23
RKR1YMR247C CTF8P38877 133 aa1.1□□□□□ -2.23
RKR1YMR247C MND2P40577 368 aa1.1□□□□□ -2.23
RKR1YMR247C MRPL22P53881 309 aa1.1□□□□□ -2.23
RKR1YMR247C CTF4Q01454 927 aa1.1□□□□□ -2.23
RKR1YMR247C REC102Q02721 264 aa1.1□□□□□ -2.23
RKR1YMR247C NSE5Q03718 556 aa1.1□□□□□ -2.23
RKR1YMR247C ADY3Q07732 790 aa1.1□□□□□ -2.23
RKR1YMR247C GPB1Q08886 897 aa1.1□□□□□ -2.23
RKR1YMR247C TCB3Q03640 1545 aaKnown RBP1.1□□□□□ -2.23
RKR1YMR247C MON2P48563 1636 aaPredicted RBP1.1□□□□□ -2.23
RKR1YMR247C FBP1P09201 348 aa1.1□□□□□ -2.23
RKR1YMR247C ABF1P14164 731 aa1.1□□□□□ -2.23
RKR1YMR247C CDC43P18898 376 aa1.1□□□□□ -2.23
RKR1YMR247C ECM21P38167 1117 aaKnown RBP1.1□□□□□ -2.23
RKR1YMR247C POA1P38218 177 aa1.1□□□□□ -2.23
RKR1YMR247C LAM1P38851 1228 aa1.1□□□□□ -2.23
RKR1YMR247C TAT2P38967 592 aa1.1□□□□□ -2.23
RKR1YMR247C SPF1P39986 1215 aaKnown RBP1.1□□□□□ -2.23
RKR1YMR247C LTP1P40347 161 aa1.1□□□□□ -2.23
RKR1YMR247C THI6P41835 540 aa1.1□□□□□ -2.23
RKR1YMR247C BFA1P47113 574 aa1.1□□□□□ -2.23
RKR1YMR247C DAK1P54838 584 aaKnown RBP1.1□□□□□ -2.23
RKR1YMR247C CLU1Q03690 1277 aaKnown RBP1.1□□□□□ -2.23
RKR1YMR247C CIT2P08679 460 aa1.09□□□□□ -2.23
RKR1YMR247C RPB10P22139 70 aa1.09□□□□□ -2.23
RKR1YMR247C MRC1P25588 1096 aa1.09□□□□□ -2.23
RKR1YMR247C PRO1P32264 428 aa1.09□□□□□ -2.23
RKR1YMR247C LIP5P32875 414 aa1.09□□□□□ -2.23
RKR1YMR247C TSA1P34760 196 aaKnown RBP1.09□□□□□ -2.23
RKR1YMR247C RER2P35196 286 aa1.09□□□□□ -2.23
RKR1YMR247C OAR1P35731 278 aa1.09□□□□□ -2.23
RKR1YMR247C TAF5P38129 798 aa1.09□□□□□ -2.23
RKR1YMR247C YER158CP40095 573 aa1.09□□□□□ -2.23
RKR1YMR247C OPT1P40897 799 aa1.09□□□□□ -2.23
RKR1YMR247C PMT3P47190 753 aa1.09□□□□□ -2.23
RKR1YMR247C HSV2P50079 448 aaPredicted RBP1.09□□□□□ -2.23
RKR1YMR247C EXG2P52911 562 aa1.09□□□□□ -2.23
RKR1YMR247C NRD1P53617 575 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
RKR1YMR247C PEX13P80667 386 aa1.09□□□□□ -2.23
RKR1YMR247C BUL2Q03758 920 aaKnown RBP1.09□□□□□ -2.23
RKR1YMR247C YDR514CQ04408 483 aa1.09□□□□□ -2.23
RKR1YMR247C YML083CQ04526 418 aa1.09□□□□□ -2.23
RKR1YMR247C IRC3Q06683 689 aa1.09□□□□□ -2.23
RKR1YMR247C MDM38Q08179 573 aa1.09□□□□□ -2.23
RKR1YMR247C ACF2Q12168 779 aa1.09□□□□□ -2.23
RKR1YMR247C PNS1Q12412 539 aa1.09□□□□□ -2.23
RKR1YMR247C YOL098CQ12496 1037 aa1.09□□□□□ -2.23
RKR1YMR247C TRP2P00899 507 aaKnown RBP1.09□□□□□ -2.23
RKR1YMR247C TRP4P07285 380 aaPredicted RBP1.09□□□□□ -2.23
RKR1YMR247C SPE1P08432 466 aa1.09□□□□□ -2.23
RKR1YMR247C RPL11AP0C0W9 174 aaKnown RBP1.09□□□□□ -2.23
RKR1YMR247C UGA2P38067 497 aa1.09□□□□□ -2.23
RKR1YMR247C RPN10P38886 268 aaKnown RBP1.09□□□□□ -2.23
RKR1YMR247C GID8P40208 455 aa1.09□□□□□ -2.23
RKR1YMR247C SDP1P40479 209 aa1.09□□□□□ -2.23
RKR1YMR247C RAI1P53063 387 aaKnown RBP1.09□□□□□ -2.23
RKR1YMR247C YBP2P53169 641 aa1.09□□□□□ -2.23
RKR1YMR247C CWC24P53769 259 aa1.09□□□□□ -2.23
RKR1YMR247C GPD1Q00055 391 aaKnown RBP1.09□□□□□ -2.23
RKR1YMR247C MRL1Q06815 381 aa1.09□□□□□ -2.23
RKR1YMR247C HBT1Q07653 1046 aaKnown RBP1.09□□□□□ -2.23
RKR1YMR247C OPI10Q08202 246 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms