RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C RPL22AP05749 121 aaKnown RBP3.87□□□□□ -1.79
SHH3YMR118C PRP5P21372 849 aaPredicted RBP3.87□□□□□ -1.79
SHH3YMR118C OPI1P21957 404 aa3.87□□□□□ -1.79
SHH3YMR118C MCM4P30665 933 aaKnown RBP3.87□□□□□ -1.79
SHH3YMR118C IMP2'P32351 346 aa3.87□□□□□ -1.79
SHH3YMR118C RTG2P32608 588 aaKnown RBP3.87□□□□□ -1.79
SHH3YMR118C SAP190P36123 1033 aa3.87□□□□□ -1.79
SHH3YMR118C NCL1P38205 684 aaKnown RBP3.87□□□□□ -1.79
SHH3YMR118C RGD1P38339 666 aa3.87□□□□□ -1.79
SHH3YMR118C PRK1P40494 810 aa3.87□□□□□ -1.79
SHH3YMR118C XKS1P42826 600 aa3.87□□□□□ -1.79
SHH3YMR118C CTK3P46963 296 aaPredicted RBP3.87□□□□□ -1.79
SHH3YMR118C BUD9P53226 547 aa3.87□□□□□ -1.79
SHH3YMR118C ALF1P53904 254 aa3.87□□□□□ -1.79
SHH3YMR118C PRP3Q03338 469 aaPredicted RBP3.87□□□□□ -1.79
SHH3YMR118C GFD1Q04839 188 aaKnown RBP3.87□□□□□ -1.79
SHH3YMR118C VPS38Q05919 439 aa3.87□□□□□ -1.79
SHH3YMR118C RUD3Q12234 484 aaKnown RBP3.87□□□□□ -1.79
SHH3YMR118C YOL098CQ12496 1037 aa3.87□□□□□ -1.79
SHH3YMR118C BNI1P41832 1953 aa3.86□□□□□ -1.79
SHH3YMR118C HSP82P02829 709 aaKnown RBP3.86□□□□□ -1.79
SHH3YMR118C SUP35P05453 685 aaKnown RBP3.86□□□□□ -1.79
SHH3YMR118C TIF1P10081 395 aaKnown RBP3.86□□□□□ -1.79
SHH3YMR118C MSH3P25336 1018 aa3.86□□□□□ -1.79
SHH3YMR118C STO1P34160 861 aaKnown RBP3.86□□□□□ -1.79
SHH3YMR118C SWH1P35845 1188 aa3.86□□□□□ -1.79
SHH3YMR118C MUD2P36084 527 aaKnown RBP3.86□□□□□ -1.79
SHH3YMR118C ADE17P38009 592 aaKnown RBP3.86□□□□□ -1.79
SHH3YMR118C SIC1P38634 284 aa3.86□□□□□ -1.79
SHH3YMR118C SPT8P38915 602 aa3.86□□□□□ -1.79
SHH3YMR118C SAP1P39955 897 aaKnown RBP3.86□□□□□ -1.79
SHH3YMR118C BIM1P40013 344 aa3.86□□□□□ -1.79
SHH3YMR118C SEC9P40357 651 aa3.86□□□□□ -1.79
SHH3YMR118C ATG32P40458 529 aa3.86□□□□□ -1.79
SHH3YMR118C EPL1P43572 832 aa3.86□□□□□ -1.79
SHH3YMR118C ENV11P53246 860 aa3.86□□□□□ -1.79
SHH3YMR118C FAR11P53917 953 aa3.86□□□□□ -1.79
SHH3YMR118C ECM23Q02710 187 aa3.86□□□□□ -1.79
SHH3YMR118C RMT2Q03305 412 aa3.86□□□□□ -1.79
SHH3YMR118C PKH1Q03407 766 aa3.86□□□□□ -1.79
SHH3YMR118C YPL225WQ08971 146 aaKnown RBP3.86□□□□□ -1.79
SHH3YMR118C ATG9Q12142 997 aa3.86□□□□□ -1.79
SHH3YMR118C OSH2Q12451 1283 aa3.86□□□□□ -1.79
SHH3YMR118C RRP5Q05022 1729 aaKnown RBP3.86□□□□□ -1.79
SHH3YMR118C SEC23P15303 768 aaKnown RBP3.85□□□□□ -1.79
SHH3YMR118C PFK2P16862 959 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SHH3YMR118C SRP54P20424 541 aaKnown RBP3.85□□□□□ -1.79
SHH3YMR118C CBP3P21560 335 aa3.85□□□□□ -1.79
SHH3YMR118C NAR1P23503 491 aaKnown RBP3.85□□□□□ -1.79
SHH3YMR118C PRP45P28004 379 aaPredicted RBP3.85□□□□□ -1.79
SHH3YMR118C SAC6P32599 642 aaKnown RBP3.85□□□□□ -1.79
SHH3YMR118C NFU1P32860 256 aa3.85□□□□□ -1.79
SHH3YMR118C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SHH3YMR118C BYE1P36106 594 aa3.85□□□□□ -1.79
SHH3YMR118C BUD16P39988 312 aa3.85□□□□□ -1.79
SHH3YMR118C RPL34BP40525 121 aaKnown RBP3.85□□□□□ -1.79
SHH3YMR118C HUL4P40985 892 aa3.85□□□□□ -1.79
SHH3YMR118C SSF2Q12153 453 aaPredicted RBP3.85□□□□□ -1.79
SHH3YMR118C HCA4P20448 770 aaKnown RBP3.84□□□□□ -1.79
SHH3YMR118C SEC65P29478 273 aa3.84□□□□□ -1.79
SHH3YMR118C NAB2P32505 525 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
SHH3YMR118C ECM32P32644 1121 aaKnown RBP3.84□□□□□ -1.79
SHH3YMR118C KAP122P32767 1081 aa3.84□□□□□ -1.79
SHH3YMR118C APL2P36000 726 aaPredicted RBP3.84□□□□□ -1.79
SHH3YMR118C PXL1P36166 706 aa3.84□□□□□ -1.79
SHH3YMR118C RPN10P38886 268 aaKnown RBP3.84□□□□□ -1.79
SHH3YMR118C YMR147WP40218 223 aaKnown RBP3.84□□□□□ -1.79
SHH3YMR118C KTR7P40504 517 aa3.84□□□□□ -1.79
SHH3YMR118C ENP2P48234 707 aaKnown RBP3.84□□□□□ -1.79
SHH3YMR118C SKP1P52286 194 aa3.84□□□□□ -1.79
SHH3YMR118C CUE3P53137 624 aaKnown RBP3.84□□□□□ -1.79
SHH3YMR118C BOP3P53958 396 aa3.84□□□□□ -1.79
SHH3YMR118C ERG5P54781 538 aa3.84□□□□□ -1.79
SHH3YMR118C CUS1Q02554 436 aaPredicted RBP3.84□□□□□ -1.79
SHH3YMR118C VTC3Q02725 835 aa3.84□□□□□ -1.79
SHH3YMR118C GIS4Q04233 774 aa3.84□□□□□ -1.79
SHH3YMR118C UTP4Q06679 776 aaKnown RBP3.84□□□□□ -1.79
SHH3YMR118C VAC14Q06708 880 aa3.84□□□□□ -1.79
SHH3YMR118C SSP2Q08646 371 aa3.84□□□□□ -1.79
SHH3YMR118C AFT2Q08957 416 aa3.84□□□□□ -1.79
SHH3YMR118C AI3P03877 415 aa3.83□□□□□ -1.8
SHH3YMR118C RAD1P06777 1100 aa3.83□□□□□ -1.8
SHH3YMR118C ARD1P07347 238 aaPredicted RBP3.83□□□□□ -1.8
SHH3YMR118C SEC18P18759 758 aaKnown RBP3.83□□□□□ -1.8
SHH3YMR118C OSM1P21375 501 aaKnown RBP3.83□□□□□ -1.8
SHH3YMR118C URA1P28272 314 aaPredicted RBP3.83□□□□□ -1.8
SHH3YMR118C SWI3P32591 825 aa3.83□□□□□ -1.8
SHH3YMR118C PEP12P32854 288 aa3.83□□□□□ -1.8
SHH3YMR118C CNS1P33313 385 aa3.83□□□□□ -1.8
SHH3YMR118C EFM2P38347 419 aa3.83□□□□□ -1.8
SHH3YMR118C CRG1P38892 291 aaRIP-Chip data3.83□□□□□ -1.8not detected
SHH3YMR118C CCC2P38995 1004 aa3.83□□□□□ -1.8
SHH3YMR118C VPS8P39702 1274 aa3.83□□□□□ -1.8
SHH3YMR118C RIO2P40160 425 aaKnown RBP3.83□□□□□ -1.8
SHH3YMR118C MIC19P43594 170 aa3.83□□□□□ -1.8
SHH3YMR118C FYV8P46949 817 aaKnown RBP3.83□□□□□ -1.8
SHH3YMR118C AVT1P47082 602 aa3.83□□□□□ -1.8
SHH3YMR118C YJR079WP47126 109 aa3.83□□□□□ -1.8
SHH3YMR118C ACS2P52910 683 aaKnown RBP3.83□□□□□ -1.8
SHH3YMR118C YBP2P53169 641 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms