RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C YML133CQ03099 1374 aa5.96□□□□□ -1.46
VBA1YMR088C YLL067CQ07888 1374 aa5.96□□□□□ -1.46
VBA1YMR088C YLL066CQ99208 1374 aa5.96□□□□□ -1.46
VBA1YMR088C PMA2P19657 947 aa5.95□□□□□ -1.46
VBA1YMR088C URA1P28272 314 aaPredicted RBP5.95□□□□□ -1.46
VBA1YMR088C YEL043WP32618 956 aa5.95□□□□□ -1.46
VBA1YMR088C CSE1P33307 960 aa5.95□□□□□ -1.46
VBA1YMR088C PET112P33893 541 aa5.95□□□□□ -1.46
VBA1YMR088C SET3P36124 751 aa5.95□□□□□ -1.46
VBA1YMR088C RGA1P39083 1007 aa5.95□□□□□ -1.46
VBA1YMR088C YJL070CP40361 888 aa5.95□□□□□ -1.46
VBA1YMR088C SAP155P43612 1002 aa5.95□□□□□ -1.46
VBA1YMR088C GCD14P46959 383 aaPredicted RBP5.95□□□□□ -1.46
VBA1YMR088C YJR142WP47173 342 aa5.95□□□□□ -1.46
VBA1YMR088C TRF5P48561 642 aaKnown RBP5.95□□□□□ -1.46
VBA1YMR088C ATP22P50273 684 aaPredicted RBP5.95□□□□□ -1.46
VBA1YMR088C ARP5P53946 755 aa5.95□□□□□ -1.46
VBA1YMR088C FMP30Q02883 468 aa5.95□□□□□ -1.46
VBA1YMR088C HOS3Q02959 697 aaKnown RBP5.95□□□□□ -1.46
VBA1YMR088C NUP145P49687 1317 aa5.95□□□□□ -1.46
VBA1YMR088C LHS1P36016 881 aa5.94□□□□□ -1.46
VBA1YMR088C RSM22P36056 628 aa5.94□□□□□ -1.46
VBA1YMR088C YRO2P38079 344 aa5.94□□□□□ -1.46
VBA1YMR088C RSM25P40496 264 aa5.94□□□□□ -1.46
VBA1YMR088C RET2P43621 546 aa5.94□□□□□ -1.46
VBA1YMR088C HST1P53685 503 aa5.94□□□□□ -1.46
VBA1YMR088C YML108WQ03759 105 aa5.94□□□□□ -1.46
VBA1YMR088C CHS5Q12114 671 aaKnown RBP5.94□□□□□ -1.46
VBA1YMR088C MCD1Q12158 566 aa5.94□□□□□ -1.46
VBA1YMR088C INH1P01097 85 aa5.94□□□□□ -1.46
VBA1YMR088C KSS1P14681 368 aa5.94□□□□□ -1.46
VBA1YMR088C SSO1P32867 290 aa5.94□□□□□ -1.46
VBA1YMR088C BUD2P33314 1104 aa5.94□□□□□ -1.46
VBA1YMR088C VPS35P34110 944 aa5.94□□□□□ -1.46
VBA1YMR088C ARL1P38116 183 aaKnown RBP5.94□□□□□ -1.46
VBA1YMR088C SOH1P38633 127 aa5.94□□□□□ -1.46
VBA1YMR088C YAP1801P38856 637 aa5.94□□□□□ -1.46
VBA1YMR088C MTW1P39731 289 aa5.94□□□□□ -1.46
VBA1YMR088C SNX4P47057 423 aa5.94□□□□□ -1.46
VBA1YMR088C VTC4P47075 721 aa5.94□□□□□ -1.46
VBA1YMR088C SPO1P53541 631 aa5.94□□□□□ -1.46
VBA1YMR088C CEG1Q01159 459 aaPredicted RBP5.94□□□□□ -1.46
VBA1YMR088C ECM23Q02710 187 aa5.94□□□□□ -1.46
VBA1YMR088C HAS1Q03532 505 aaKnown RBP5.94□□□□□ -1.46
VBA1YMR088C CRN1Q06440 651 aa5.94□□□□□ -1.46
VBA1YMR088C RSC3Q06639 885 aa5.94□□□□□ -1.46
VBA1YMR088C BUD7Q08754 746 aa5.94□□□□□ -1.46
VBA1YMR088C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
VBA1YMR088C RPS3P05750 240 aaKnown RBP5.93□□□□□ -1.46
VBA1YMR088C GAL2P13181 574 aa5.93□□□□□ -1.46
VBA1YMR088C SUI2P20459 304 aaKnown RBP5.93□□□□□ -1.46
VBA1YMR088C MRPS28P21771 286 aa5.93□□□□□ -1.46
VBA1YMR088C MSP1P28737 362 aa5.93□□□□□ -1.46
VBA1YMR088C HSP104P31539 908 aaKnown RBP5.93□□□□□ -1.46
VBA1YMR088C TPS2P31688 896 aaKnown RBP5.93□□□□□ -1.46
VBA1YMR088C KAR9P32526 644 aa5.93□□□□□ -1.46
VBA1YMR088C PIH1P38768 344 aa5.93□□□□□ -1.46
VBA1YMR088C MNT3P40549 630 aa5.93□□□□□ -1.46
VBA1YMR088C ATG16Q03818 150 aa5.93□□□□□ -1.46
VBA1YMR088C GAL1P04385 528 aa5.92□□□□□ -1.46
VBA1YMR088C SSC1P0CS90 654 aaKnown RBP5.92□□□□□ -1.46
VBA1YMR088C KNS1P32350 737 aaPredicted RBP5.92□□□□□ -1.46
VBA1YMR088C IXR1P33417 597 aa5.92□□□□□ -1.46
VBA1YMR088C MAK5P38112 773 aaPredicted RBP5.92□□□□□ -1.46
VBA1YMR088C YSW1P38280 609 aa5.92□□□□□ -1.46
VBA1YMR088C HAL5P38970 855 aaKnown RBP5.92□□□□□ -1.46
VBA1YMR088C YGR021WP53212 290 aa5.92□□□□□ -1.46
VBA1YMR088C ALF1P53904 254 aa5.92□□□□□ -1.46
VBA1YMR088C RRP17Q04031 235 aaPredicted RBP5.92□□□□□ -1.46
VBA1YMR088C SML1Q04964 104 aa5.92□□□□□ -1.46
VBA1YMR088C PUS5Q06244 254 aa5.92□□□□□ -1.46
VBA1YMR088C MPH2P0CD99 609 aa5.91□□□□□ -1.46
VBA1YMR088C PGI1P12709 554 aaKnown RBP5.91□□□□□ -1.46
VBA1YMR088C STE6P12866 1290 aa5.91□□□□□ -1.46
VBA1YMR088C RSC6P25632 483 aa5.91□□□□□ -1.46
VBA1YMR088C BMH1P29311 267 aaKnown RBP5.91□□□□□ -1.46
VBA1YMR088C EUG1P32474 517 aa5.91□□□□□ -1.46
VBA1YMR088C ECM4P36156 370 aa5.91□□□□□ -1.46
VBA1YMR088C REI1P38344 393 aaPredicted RBP5.91□□□□□ -1.46
VBA1YMR088C VID27P40157 782 aa5.91□□□□□ -1.46
VBA1YMR088C YGR153WP48238 217 aa5.91□□□□□ -1.46
VBA1YMR088C COP1P53622 1201 aaKnown RBP5.91□□□□□ -1.46
VBA1YMR088C ASI1P54074 624 aa5.91□□□□□ -1.46
VBA1YMR088C UBP2Q01476 1272 aa5.91□□□□□ -1.46
VBA1YMR088C FRK1Q03002 865 aaPredicted RBP5.91□□□□□ -1.46
VBA1YMR088C ERO1Q03103 563 aa5.91□□□□□ -1.46
VBA1YMR088C BDF2Q07442 638 aa5.91□□□□□ -1.46
VBA1YMR088C VAM6Q07468 1049 aa5.91□□□□□ -1.46
VBA1YMR088C SMC4Q12267 1418 aa5.91□□□□□ -1.46
VBA1YMR088C CIT2P08679 460 aa5.91□□□□□ -1.46
VBA1YMR088C NTG1P31378 399 aa5.91□□□□□ -1.46
VBA1YMR088C KRE6P32486 720 aa5.91□□□□□ -1.46
VBA1YMR088C SFA1P32771 386 aa5.91□□□□□ -1.46
VBA1YMR088C UBC6P33296 250 aaPredicted RBP5.91□□□□□ -1.46
VBA1YMR088C STE13P33894 931 aa5.91□□□□□ -1.46
VBA1YMR088C YKR018CP36114 725 aa5.91□□□□□ -1.46
VBA1YMR088C CTM1P38818 585 aa5.91□□□□□ -1.46
VBA1YMR088C CCT3P39077 534 aaKnown RBP5.91□□□□□ -1.46
VBA1YMR088C XDJ1P39102 459 aa5.91□□□□□ -1.46
VBA1YMR088C SNZ3P43545 298 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms