RNA–Protein interactions for RNA: YMR005W

TAF4, Transcript of TFIID subunit (48 kDa), yeastyeast

Gene TAF4, Length 1,167 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TAF4YMR005W GUS1P46655 708 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
TAF4YMR005W PFD1P46988 109 aa7.55□□□□□ -1.2
TAF4YMR005W TIM54P47045 478 aa7.55□□□□□ -1.2
TAF4YMR005W DUS3Q06053 668 aaKnown RBP7.55□□□□□ -1.2
TAF4YMR005W TPO2P53283 614 aa7.54□□□□□ -1.2
TAF4YMR005W SRP1Q02821 542 aaKnown RBP7.54□□□□□ -1.2
TAF4YMR005W YDR306CQ06640 478 aa7.54□□□□□ -1.2
TAF4YMR005W OSH2Q12451 1283 aa7.54□□□□□ -1.2
TAF4YMR005W ACE2P21192 770 aa7.53□□□□□ -1.2
TAF4YMR005W RPL8BP29453 256 aaKnown RBP7.53□□□□□ -1.2
TAF4YMR005W SAH1P39954 449 aaKnown RBP7.53□□□□□ -1.2
TAF4YMR005W ECL1P48235 211 aa7.53□□□□□ -1.2
TAF4YMR005W ERP6P53198 216 aa7.53□□□□□ -1.2
TAF4YMR005W MAP1Q01662 387 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
TAF4YMR005W HRQ1Q05549 1077 aa7.53□□□□□ -1.2
TAF4YMR005W YLL058WQ12198 575 aa7.53□□□□□ -1.2
TAF4YMR005W STI1P15705 589 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
TAF4YMR005W LRG1P35688 1017 aa7.52□□□□□ -1.21
TAF4YMR005W YKL151CP36059 337 aa7.52□□□□□ -1.21
TAF4YMR005W ETP1P38748 585 aaKnown RBP7.52□□□□□ -1.21
TAF4YMR005W IOC3P43596 787 aa7.52□□□□□ -1.21
TAF4YMR005W RSM24Q03976 319 aa7.52□□□□□ -1.21
TAF4YMR005W NSE3Q05541 303 aa7.52□□□□□ -1.21
TAF4YMR005W EAF1Q06337 982 aa7.52□□□□□ -1.21
TAF4YMR005W BDF2Q07442 638 aa7.52□□□□□ -1.21
TAF4YMR005W CDC53Q12018 815 aaKnown RBP7.52□□□□□ -1.21
TAF4YMR005W KIN2P13186 1147 aaKnown RBP7.51□□□□□ -1.21
TAF4YMR005W PPH3P32345 308 aa7.51□□□□□ -1.21
TAF4YMR005W CDC12P32468 407 aaKnown RBP7.51□□□□□ -1.21
TAF4YMR005W ABZ1P37254 787 aaPredicted RBP7.51□□□□□ -1.21
TAF4YMR005W ALR2P43553 858 aa7.51□□□□□ -1.21
TAF4YMR005W HUL5P53119 910 aa7.51□□□□□ -1.21
TAF4YMR005W UTP8P53276 713 aaKnown RBP7.51□□□□□ -1.21
TAF4YMR005W AAR2P32357 355 aaPredicted RBP7.5□□□□□ -1.21
TAF4YMR005W MTC3P53077 123 aa7.5□□□□□ -1.21
TAF4YMR005W YGR125WP53273 1036 aa7.5□□□□□ -1.21
TAF4YMR005W NRD1P53617 575 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
TAF4YMR005W MDM38Q08179 573 aa7.5□□□□□ -1.21
TAF4YMR005W YDL177CQ12257 170 aa7.5□□□□□ -1.21
TAF4YMR005W HSP60P19882 572 aaKnown RBP7.49□□□□□ -1.21
TAF4YMR005W ARE1P25628 610 aa7.49□□□□□ -1.21
TAF4YMR005W APL1P27351 700 aa7.49□□□□□ -1.21
TAF4YMR005W SRP40P32583 406 aaPredicted RBP7.49□□□□□ -1.21
TAF4YMR005W SCT1P32784 759 aa7.49□□□□□ -1.21
TAF4YMR005W HFM1P51979 1187 aa7.49□□□□□ -1.21
TAF4YMR005W UBX5Q06682 500 aa7.48□□□□□ -1.21
TAF4YMR005W FLC1Q08967 793 aa7.48□□□□□ -1.21
TAF4YMR005W CIT1P00890 479 aa7.47□□□□□ -1.21
TAF4YMR005W CDC11P32458 415 aa7.47□□□□□ -1.21
TAF4YMR005W HBS1P32769 611 aaKnown RBP7.47□□□□□ -1.21
TAF4YMR005W YHR020WP38708 688 aaKnown RBP7.47□□□□□ -1.21
TAF4YMR005W SIT1P39980 628 aa7.47□□□□□ -1.21
TAF4YMR005W SNO2P53823 222 aa7.47□□□□□ -1.21
TAF4YMR005W RIB2Q12362 591 aaKnown RBP7.47□□□□□ -1.21
TAF4YMR005W YOR131CQ12486 218 aa7.47□□□□□ -1.21
TAF4YMR005W YTA7P40340 1379 aa7.46□□□□□ -1.21
TAF4YMR005W CYC1P00044 109 aaPredicted RBP7.46□□□□□ -1.22
TAF4YMR005W ADE8P04161 214 aa7.46□□□□□ -1.22
TAF4YMR005W SEG2P34250 1132 aa7.46□□□□□ -1.22
TAF4YMR005W CCC2P38995 1004 aa7.46□□□□□ -1.22
TAF4YMR005W SRT1Q03175 343 aa7.46□□□□□ -1.22
TAF4YMR005W SIZ1Q04195 904 aa7.46□□□□□ -1.22
TAF4YMR005W OSW2Q12202 724 aa7.46□□□□□ -1.22
TAF4YMR005W FUN30P31380 1131 aa7.45□□□□□ -1.22
TAF4YMR005W YKL091CP33324 310 aaKnown RBP7.45□□□□□ -1.22
TAF4YMR005W GIC1P38785 314 aa7.45□□□□□ -1.22
TAF4YMR005W MRPL22P53881 309 aa7.45□□□□□ -1.22
TAF4YMR005W YOR352WQ08816 343 aa7.45□□□□□ -1.22
TAF4YMR005W CMP2P14747 604 aa7.44□□□□□ -1.22
TAF4YMR005W YRO2P38079 344 aa7.44□□□□□ -1.22
TAF4YMR005W HUL4P40985 892 aa7.44□□□□□ -1.22
TAF4YMR005W MSC2Q03455 724 aa7.44□□□□□ -1.22
TAF4YMR005W GGA2P38817 585 aaKnown RBP7.43□□□□□ -1.22
TAF4YMR005W YAP1801P38856 637 aa7.43□□□□□ -1.22
TAF4YMR005W GYP7P48365 746 aa7.43□□□□□ -1.22
TAF4YMR005W GAS1P22146 559 aaKnown RBP7.42□□□□□ -1.22
TAF4YMR005W YKR078WP36158 585 aaKnown RBP7.42□□□□□ -1.22
TAF4YMR005W RSP5P39940 809 aaKnown RBP7.42□□□□□ -1.22
TAF4YMR005W AVT1P47082 602 aa7.42□□□□□ -1.22
TAF4YMR005W PRP43P53131 767 aaKnown RBP7.42□□□□□ -1.22
TAF4YMR005W RPN4Q03465 531 aa7.42□□□□□ -1.22
TAF4YMR005W SGD1Q06132 899 aa7.42□□□□□ -1.22
TAF4YMR005W YDL124WQ07551 312 aaKnown RBP7.42□□□□□ -1.22
TAF4YMR005W XYL2Q07993 356 aa7.42□□□□□ -1.22
TAF4YMR005W VTS1Q08831 523 aaKnown RBP RIP-Chip data7.42□□□□□ -1.22not detected
TAF4YMR005W HBN1Q96VH4 193 aa7.42□□□□□ -1.22
TAF4YMR005W GAL10P04397 699 aa7.41□□□□□ -1.22
TAF4YMR005W GAL11P19659 1081 aa7.41□□□□□ -1.22
TAF4YMR005W SRM1P21827 482 aa7.41□□□□□ -1.22
TAF4YMR005W YER158CP40095 573 aa7.41□□□□□ -1.22
TAF4YMR005W NPL3Q01560 414 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
TAF4YMR005W TAF8Q03750 510 aa7.41□□□□□ -1.22
TAF4YMR005W LCD1Q04377 747 aa7.41□□□□□ -1.22
TAF4YMR005W NPP1P25353 742 aa7.4□□□□□ -1.22
TAF4YMR005W AFR1P33304 620 aa7.4□□□□□ -1.22
TAF4YMR005W TSA1P34760 196 aaKnown RBP7.4□□□□□ -1.22
TAF4YMR005W YBR284WP38150 797 aa7.4□□□□□ -1.22
TAF4YMR005W TSL1P38427 1098 aaKnown RBP7.4□□□□□ -1.22
TAF4YMR005W NPP2P39997 493 aa7.4□□□□□ -1.22
TAF4YMR005W NIT1P40447 199 aa7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms