RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W KTR4P38131 464 aa2.85□□□□□ -1.95
PRP39YML046W LAS17Q12446 633 aa2.85□□□□□ -1.95
PRP39YML046W RRT14P40470 206 aa2.84□□□□□ -1.95
PRP39YML046W BUL1P48524 976 aa2.84□□□□□ -1.95
PRP39YML046W ICT1Q12385 394 aa2.84□□□□□ -1.95
PRP39YML046W NPC2Q12408 173 aa2.84□□□□□ -1.95
PRP39YML046W ERP5P38819 212 aa2.84□□□□□ -1.96
PRP39YML046W ROD1Q02805 837 aa2.84□□□□□ -1.96
PRP39YML046W HOF1Q05080 669 aa2.84□□□□□ -1.96
PRP39YML046W OXR1Q08952 273 aa2.84□□□□□ -1.96
PRP39YML046W SPC42P36094 363 aa2.83□□□□□ -1.96
PRP39YML046W HFM1P51979 1187 aa2.83□□□□□ -1.96
PRP39YML046W GND2P53319 492 aa2.83□□□□□ -1.96
PRP39YML046W BI4P03879 638 aa2.82□□□□□ -1.96
PRP39YML046W MLS1P30952 554 aa2.82□□□□□ -1.96
PRP39YML046W MKK2P32491 506 aa2.82□□□□□ -1.96
PRP39YML046W UGA2P38067 497 aa2.82□□□□□ -1.96
PRP39YML046W MDM10P18409 493 aa2.82□□□□□ -1.96
PRP39YML046W ERG4P25340 473 aa2.82□□□□□ -1.96
PRP39YML046W PIC2P40035 300 aa2.82□□□□□ -1.96
PRP39YML046W MUK1Q02866 612 aa2.82□□□□□ -1.96
PRP39YML046W TOS4Q06266 489 aa2.82□□□□□ -1.96
PRP39YML046W YBL113CQ7M4S9 792 aa2.82□□□□□ -1.96
PRP39YML046W PHO4P07270 312 aaKnown RBP2.81□□□□□ -1.96
PRP39YML046W KAR4P25583 335 aa2.8□□□□□ -1.96
PRP39YML046W TMT1P32643 299 aa2.8□□□□□ -1.96
PRP39YML046W LEO1P38439 464 aa2.8□□□□□ -1.96
PRP39YML046W ENT3P47160 408 aa2.8□□□□□ -1.96
PRP39YML046W SIW14P53965 281 aa2.8□□□□□ -1.96
PRP39YML046W SPE1P08432 466 aa2.79□□□□□ -1.96
PRP39YML046W CAD1P24813 409 aaKnown RBP2.79□□□□□ -1.96
PRP39YML046W SYP1P25623 870 aaKnown RBP2.79□□□□□ -1.96
PRP39YML046W FAA3P39002 694 aa2.79□□□□□ -1.96
PRP39YML046W RNT1Q02555 471 aa2.79□□□□□ -1.96
PRP39YML046W ACM1Q08981 209 aa2.79□□□□□ -1.96
PRP39YML046W MXR1P40029 184 aa2.79□□□□□ -1.96
PRP39YML046W CNN1P43618 361 aa2.79□□□□□ -1.96
PRP39YML046W YGR012WP53206 393 aa2.79□□□□□ -1.96
PRP39YML046W XYL2Q07993 356 aa2.79□□□□□ -1.96
PRP39YML046W GUP2Q08929 609 aa2.79□□□□□ -1.96
PRP39YML046W THS1P04801 734 aaKnown RBP2.78□□□□□ -1.96
PRP39YML046W NCS6P53088 359 aa2.78□□□□□ -1.96
PRP39YML046W IMO32P53219 342 aa2.78□□□□□ -1.96
PRP39YML046W PPR1P07272 904 aaPredicted RBP2.77□□□□□ -1.97
PRP39YML046W DBP5P20449 482 aaKnown RBP2.77□□□□□ -1.97
PRP39YML046W CCC2P38995 1004 aa2.77□□□□□ -1.97
PRP39YML046W SDS3P40505 327 aa2.77□□□□□ -1.97
PRP39YML046W PSP2P50109 593 aaKnown RBP2.77□□□□□ -1.97
PRP39YML046W SEC5P89102 971 aa2.77□□□□□ -1.97
PRP39YML046W COQ11Q05892 277 aa2.77□□□□□ -1.97
PRP39YML046W HBT1Q07653 1046 aaKnown RBP2.77□□□□□ -1.97
PRP39YML046W BNR1P40450 1375 aa2.77□□□□□ -1.97
PRP39YML046W GEM1P39722 662 aa2.77□□□□□ -1.97
PRP39YML046W YNL162W-AQ3E7A8 72 aa2.77□□□□□ -1.97
PRP39YML046W TRP4P07285 380 aaPredicted RBP2.76□□□□□ -1.97
PRP39YML046W RPL11AP0C0W9 174 aaKnown RBP2.76□□□□□ -1.97
PRP39YML046W PPZ2P33329 710 aa2.76□□□□□ -1.97
PRP39YML046W SLA2P33338 968 aa2.76□□□□□ -1.97
PRP39YML046W CDA1Q06702 301 aa2.76□□□□□ -1.97
PRP39YML046W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
PRP39YML046W OSW2Q12202 724 aa2.76□□□□□ -1.97
PRP39YML046W RPL11BQ3E757 174 aaPredicted RBP2.76□□□□□ -1.97
PRP39YML046W HXK1P04806 485 aaKnown RBP2.75□□□□□ -1.97
PRP39YML046W ALG7P07286 448 aa2.75□□□□□ -1.97
PRP39YML046W YAP1801P38856 637 aa2.75□□□□□ -1.97
PRP39YML046W URM1P40554 99 aaPredicted RBP2.75□□□□□ -1.97
PRP39YML046W MPH1P40562 993 aa2.75□□□□□ -1.97
PRP39YML046W GLO1P50107 326 aa2.75□□□□□ -1.97
PRP39YML046W SEC8P32855 1065 aa2.75□□□□□ -1.97
PRP39YML046W SRP101P32916 621 aa2.75□□□□□ -1.97
PRP39YML046W MRH1Q12117 320 aaPredicted RBP2.75□□□□□ -1.97
PRP39YML046W ATG19P35193 415 aa2.74□□□□□ -1.97
PRP39YML046W GEF1P37020 779 aa2.74□□□□□ -1.97
PRP39YML046W HXT13P39924 564 aa2.74□□□□□ -1.97
PRP39YML046W HXT17P53631 564 aa2.74□□□□□ -1.97
PRP39YML046W HXT15P54854 567 aa2.74□□□□□ -1.97
PRP39YML046W GNT1Q12096 491 aa2.74□□□□□ -1.97
PRP39YML046W GFA1P14742 717 aaKnown RBP2.73□□□□□ -1.97
PRP39YML046W CDC3P32457 520 aaKnown RBP2.73□□□□□ -1.97
PRP39YML046W RIX1P38883 763 aaPredicted RBP2.73□□□□□ -1.97
PRP39YML046W TUB1P09733 447 aaKnown RBP2.73□□□□□ -1.97
PRP39YML046W HSF1P10961 833 aa2.73□□□□□ -1.97
PRP39YML046W PRE9P23638 258 aaKnown RBP2.73□□□□□ -1.97
PRP39YML046W DBP2P24783 546 aaKnown RBP2.73□□□□□ -1.97
PRP39YML046W MCM7P38132 845 aa2.73□□□□□ -1.97
PRP39YML046W YHL050CP38721 697 aa2.73□□□□□ -1.97
PRP39YML046W YHR219WP38900 624 aa2.73□□□□□ -1.97
PRP39YML046W MCD1Q12158 566 aa2.73□□□□□ -1.97
PRP39YML046W MTC3P53077 123 aa2.72□□□□□ -1.97
PRP39YML046W MRL1Q06815 381 aa2.72□□□□□ -1.97
PRP39YML046W WHI4Q07655 649 aaKnown RBP2.72□□□□□ -1.97
PRP39YML046W SUT2Q12286 268 aa2.72□□□□□ -1.97
PRP39YML046W TRM13Q12383 476 aa2.72□□□□□ -1.97
PRP39YML046W TDP1P38319 544 aa2.71□□□□□ -1.98
PRP39YML046W MRPS18P42847 217 aa2.71□□□□□ -1.98
PRP39YML046W MET4P32389 672 aa2.71□□□□□ -1.98
PRP39YML046W YHL017WP38745 532 aa2.71□□□□□ -1.98
PRP39YML046W DAS1P47005 663 aa2.71□□□□□ -1.98
PRP39YML046W GNP1P48813 663 aa2.71□□□□□ -1.98
PRP39YML046W HAT1Q12341 374 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms