RNA–Protein interactions for RNA: YLR466W

YRF1-4, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeast

Gene YRF1-4, Length 4,149 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRF1-4	YLR466W	PGM1	P33401	570 aa	Known RBP	6.25	□□□□□ -1.41
YRF1-4	YLR466W	ALF1	P53904	254 aa		6.25	□□□□□ -1.41
YRF1-4	YLR466W	YLR278C	Q05854	1341 aa		6.25	□□□□□ -1.41
YRF1-4	YLR466W	RPC25	P35718	212 aa		6.24	□□□□□ -1.41
YRF1-4	YLR466W	REI1	P38344	393 aa	Predicted RBP	6.24	□□□□□ -1.41
YRF1-4	YLR466W	YMR124W	P39523	943 aa	Known RBP	6.24	□□□□□ -1.41
YRF1-4	YLR466W	LSC2	P53312	427 aa		6.24	□□□□□ -1.41
YRF1-4	YLR466W	PGA2	P53903	129 aa		6.24	□□□□□ -1.41
YRF1-4	YLR466W	SEC5	P89102	971 aa		6.24	□□□□□ -1.41
YRF1-4	YLR466W	NOP14	Q99207	810 aa	Known RBP	6.24	□□□□□ -1.41
YRF1-4	YLR466W	RAD18	P10862	487 aa		6.24	□□□□□ -1.41
YRF1-4	YLR466W	CLB5	P30283	435 aa		6.24	□□□□□ -1.41
YRF1-4	YLR466W	MIP6	P38760	659 aa	Known RBP	6.24	□□□□□ -1.41
YRF1-4	YLR466W	ROG3	P43602	733 aa		6.24	□□□□□ -1.41
YRF1-4	YLR466W	ALD6	P54115	500 aa	Known RBP	6.24	□□□□□ -1.41
YRF1-4	YLR466W	RPS6A	P0CX37	236 aa	Known RBP	6.24	□□□□□ -1.41
YRF1-4	YLR466W	RPS6B	P0CX38	236 aa	Predicted RBP	6.24	□□□□□ -1.41
YRF1-4	YLR466W	TYW1	Q08960	810 aa	Known RBP	6.24	□□□□□ -1.41
YRF1-4	YLR466W	HMI1	Q12039	706 aa		6.24	□□□□□ -1.41
YRF1-4	YLR466W	KRS1	P15180	591 aa	Known RBP	6.23	□□□□□ -1.41
YRF1-4	YLR466W	UBC1	P21734	215 aa	Known RBP	6.23	□□□□□ -1.41
YRF1-4	YLR466W	SPB4	P25808	606 aa	Predicted RBP	6.23	□□□□□ -1.41
YRF1-4	YLR466W	STO1	P34160	861 aa	Known RBP	6.23	□□□□□ -1.41
YRF1-4	YLR466W	PCH2	P38126	564 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	GAA1	P39012	614 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	HMF1	P40037	129 aa	Known RBP	6.23	□□□□□ -1.41
YRF1-4	YLR466W	UTP7	P40055	554 aa	Known RBP	6.23	□□□□□ -1.41
YRF1-4	YLR466W	YLL058W	Q12198	575 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	BYE1	P36106	594 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	SIP3	P38717	1229 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	YPR078C	Q06813	372 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	OSH2	Q12451	1283 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	MAK16	P10962	306 aa	Predicted RBP	6.23	□□□□□ -1.41
YRF1-4	YLR466W	MIP1	P15801	1254 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	PKC1	P24583	1151 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	APL1	P27351	700 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	YEL043W	P32618	956 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
YRF1-4	YLR466W	TIF4631	P39935	952 aa	Known RBP	6.23	□□□□□ -1.41
YRF1-4	YLR466W	ATG3	P40344	310 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	THI6	P41835	540 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	SPR3	P41901	512 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	SUE1	Q06524	206 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	SMC5	Q08204	1093 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	TUS1	Q06412	1307 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	FLO11	P08640	1367 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	PFK1	P16861	987 aa	Known RBP	6.23	□□□□□ -1.41
YRF1-4	YLR466W	CDC60	P26637	1090 aa	Known RBP	6.23	□□□□□ -1.41
YRF1-4	YLR466W	YKL023W	P36103	277 aa	Known RBP	6.23	□□□□□ -1.41
YRF1-4	YLR466W	JNM1	P36224	373 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	YIL089W	P40500	205 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	YGR125W	P53273	1036 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	CAF130	P53280	1122 aa	Predicted RBP	6.23	□□□□□ -1.41
YRF1-4	YLR466W	UME1	Q03010	460 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	MED1	Q12321	566 aa		6.23	□□□□□ -1.41
YRF1-4	YLR466W	SPO11	P23179	398 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	DPB3	P27344	201 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	XRS2	P33301	854 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	RRP1	P35178	278 aa	Predicted RBP	6.22	□□□□□ -1.41
YRF1-4	YLR466W	UBP13	P38187	747 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	UBP15	P50101	1230 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	GUP1	P53154	560 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	MDR1	P53258	950 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	SEC23	P15303	768 aa	Known RBP	6.22	□□□□□ -1.41
YRF1-4	YLR466W	PAN5	P38787	379 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	VAC14	Q06708	880 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	JIP3	O13555	125 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	SSB1	P11484	613 aa	Known RBP	6.22	□□□□□ -1.41
YRF1-4	YLR466W	PHO88	P38264	188 aa	Predicted RBP	6.22	□□□□□ -1.41
YRF1-4	YLR466W	MCX1	P38323	520 aa	Predicted RBP	6.22	□□□□□ -1.41
YRF1-4	YLR466W	PIH1	P38768	344 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	SSB2	P40150	613 aa	Known RBP	6.22	□□□□□ -1.41
YRF1-4	YLR466W	ERG5	P54781	538 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	PUS5	Q06244	254 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	MET7	Q08645	548 aa		6.22	□□□□□ -1.41
YRF1-4	YLR466W	TIF6	Q12522	245 aa	Known RBP	6.22	□□□□□ -1.41
YRF1-4	YLR466W	PGK1	P00560	416 aa	Known RBP	6.21	□□□□□ -1.41
YRF1-4	YLR466W	GPT2	P36148	743 aa		6.21	□□□□□ -1.41
YRF1-4	YLR466W	VFA1	P40080	203 aa		6.21	□□□□□ -1.41
YRF1-4	YLR466W	SHQ1	P40486	507 aa	Predicted RBP	6.21	□□□□□ -1.41
YRF1-4	YLR466W	OSW2	Q12202	724 aa		6.21	□□□□□ -1.41
YRF1-4	YLR466W	SRD1	P09007	221 aa		6.21	□□□□□ -1.42
YRF1-4	YLR466W	EUG1	P32474	517 aa		6.21	□□□□□ -1.42
YRF1-4	YLR466W	SEC9	P40357	651 aa		6.21	□□□□□ -1.42
YRF1-4	YLR466W	AIP1	P46680	615 aa	Known RBP	6.21	□□□□□ -1.42
YRF1-4	YLR466W	CCM1	P48237	864 aa	Predicted RBP	6.21	□□□□□ -1.42
YRF1-4	YLR466W	TOF1	P53840	1238 aa		6.21	□□□□□ -1.42
YRF1-4	YLR466W	JJJ1	P53863	590 aa		6.21	□□□□□ -1.42
YRF1-4	YLR466W	SML1	Q04964	104 aa		6.21	□□□□□ -1.42
YRF1-4	YLR466W	MSC6	Q08818	692 aa	Known RBP	6.21	□□□□□ -1.42
YRF1-4	YLR466W	SMC1	P32908	1225 aa		6.21	□□□□□ -1.42
YRF1-4	YLR466W	ERG7	P38604	731 aa		6.21	□□□□□ -1.42
YRF1-4	YLR466W	NUP82	P40368	713 aa		6.21	□□□□□ -1.42
YRF1-4	YLR466W	RRB1	Q04225	511 aa	Known RBP	6.21	□□□□□ -1.42
YRF1-4	YLR466W	PHM6	Q05637	104 aa		6.21	□□□□□ -1.42
YRF1-4	YLR466W	CST9	Q06032	482 aa		6.21	□□□□□ -1.42
YRF1-4	YLR466W	DBP5	P20449	482 aa	Known RBP	6.2	□□□□□ -1.42
YRF1-4	YLR466W	NFU1	P32860	256 aa		6.2	□□□□□ -1.42
YRF1-4	YLR466W	STR2	P47164	639 aa		6.2	□□□□□ -1.42
YRF1-4	YLR466W	CRD1	Q07560	283 aa		6.2	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms