RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W LIP5P32875 414 aa6.93□□□□□ -1.3
CTR3YLR411W GTS1P40956 396 aa6.93□□□□□ -1.3
CTR3YLR411W RSC58Q07979 502 aa6.93□□□□□ -1.3
CTR3YLR411W ULS1Q08562 1619 aa6.93□□□□□ -1.3
CTR3YLR411W TY2B-LR1P0C2J3 1770 aa6.92□□□□□ -1.3
CTR3YLR411W TY2B-FP0CX63 1770 aa6.92□□□□□ -1.3
CTR3YLR411W TY2B-GR2P0CX64 1770 aa6.92□□□□□ -1.3
CTR3YLR411W TY2B-CP25384 1770 aa6.92□□□□□ -1.3
CTR3YLR411W TY2B-DR2Q03494 1770 aa6.92□□□□□ -1.3
CTR3YLR411W TY1B-DR1Q03855 1755 aa6.92□□□□□ -1.3
CTR3YLR411W TY2B-DR3Q07791 1770 aaKnown RBP6.92□□□□□ -1.3
CTR3YLR411W TY2B-OR1Q12113 1770 aa6.92□□□□□ -1.3
CTR3YLR411W TY2B-DR1Q12472 1770 aa6.92□□□□□ -1.3
CTR3YLR411W TY2B-OR2Q12501 1770 aa6.92□□□□□ -1.3
CTR3YLR411W VTH1P40438 1549 aa6.92□□□□□ -1.3
CTR3YLR411W VTH2P40890 1549 aa6.92□□□□□ -1.3
CTR3YLR411W MAC1P35192 417 aa6.92□□□□□ -1.3
CTR3YLR411W CCZ1P38273 704 aa6.92□□□□□ -1.3
CTR3YLR411W PIK1P39104 1066 aa6.92□□□□□ -1.3
CTR3YLR411W YFL054CP43549 646 aa6.92□□□□□ -1.3
CTR3YLR411W RPL11AP0C0W9 174 aaKnown RBP6.91□□□□□ -1.3
CTR3YLR411W PIN4P34217 668 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
CTR3YLR411W PNT1P38969 423 aa6.91□□□□□ -1.3
CTR3YLR411W SPF1P39986 1215 aaKnown RBP6.91□□□□□ -1.3
CTR3YLR411W SIP5P40210 489 aaKnown RBP6.91□□□□□ -1.3
CTR3YLR411W SPP382Q06411 708 aaPredicted RBP6.91□□□□□ -1.3
CTR3YLR411W WRS1Q12109 432 aaKnown RBP6.91□□□□□ -1.3
CTR3YLR411W LPX1Q12405 387 aaKnown RBP6.91□□□□□ -1.3
CTR3YLR411W RPL11BQ3E757 174 aaPredicted RBP6.91□□□□□ -1.3
CTR3YLR411W DBP2P24783 546 aaKnown RBP6.9□□□□□ -1.3
CTR3YLR411W MXR1P40029 184 aa6.9□□□□□ -1.3
CTR3YLR411W ORC3P54790 616 aa6.9□□□□□ -1.3
CTR3YLR411W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
CTR3YLR411W SHE9Q04172 456 aa6.9□□□□□ -1.3
CTR3YLR411W NBA1Q08229 501 aaKnown RBP6.9□□□□□ -1.3
CTR3YLR411W VBA5P36172 582 aa6.89□□□□□ -1.31
CTR3YLR411W SNF7P39929 240 aaKnown RBP6.89□□□□□ -1.31
CTR3YLR411W TDA5Q06417 326 aaKnown RBP6.89□□□□□ -1.31
CTR3YLR411W VPS15P22219 1454 aa6.89□□□□□ -1.31
CTR3YLR411W TY3B-GQ99315 1547 aa6.89□□□□□ -1.31
CTR3YLR411W TY2B-BQ12491 1770 aa6.88□□□□□ -1.31
CTR3YLR411W GEA2P39993 1459 aaKnown RBP6.88□□□□□ -1.31
CTR3YLR411W AIM26P32858 118 aa6.88□□□□□ -1.31
CTR3YLR411W HSP78P33416 811 aa6.88□□□□□ -1.31
CTR3YLR411W ACM1Q08981 209 aa6.87□□□□□ -1.31
CTR3YLR411W PDR10P51533 1564 aa6.86□□□□□ -1.31
CTR3YLR411W GRX1P25373 110 aaKnown RBP6.86□□□□□ -1.31
CTR3YLR411W TAT2P38967 592 aa6.86□□□□□ -1.31
CTR3YLR411W MBP1P39678 833 aa6.86□□□□□ -1.31
CTR3YLR411W GEM1P39722 662 aa6.86□□□□□ -1.31
CTR3YLR411W RSB1Q08417 382 aa6.86□□□□□ -1.31
CTR3YLR411W STE5P32917 917 aa6.85□□□□□ -1.31
CTR3YLR411W SLA2P33338 968 aa6.85□□□□□ -1.31
CTR3YLR411W MRP8P35719 219 aa6.85□□□□□ -1.31
CTR3YLR411W UGA2P38067 497 aa6.85□□□□□ -1.31
CTR3YLR411W SRB8P25648 1427 aa6.84□□□□□ -1.31
CTR3YLR411W SPS1P08458 490 aa6.84□□□□□ -1.31
CTR3YLR411W CDC25P04821 1589 aa6.83□□□□□ -1.32
CTR3YLR411W TY1B-HO13535 1793 aa6.83□□□□□ -1.32
CTR3YLR411W TY1B-DR5P0C2I2 1755 aa6.83□□□□□ -1.32
CTR3YLR411W TY1B-DR6P0C2I3 1755 aa6.83□□□□□ -1.32
CTR3YLR411W TY1B-LR2P0C2I5 1755 aa6.83□□□□□ -1.32
CTR3YLR411W TY1B-LR3P0C2I6 1755 aaKnown RBP6.83□□□□□ -1.32
CTR3YLR411W TY1B-PR1P0C2I9 1755 aaKnown RBP6.83□□□□□ -1.32
CTR3YLR411W TY1B-PR2P0C2J0 1756 aa6.83□□□□□ -1.32
CTR3YLR411W TY1B-PR3P0C2J1 1755 aaKnown RBP6.83□□□□□ -1.32
CTR3YLR411W TY1B-JR1P47098 1755 aa6.83□□□□□ -1.32
CTR3YLR411W TY1B-ML2Q03434 1755 aaKnown RBP6.83□□□□□ -1.32
CTR3YLR411W TY1B-ER1Q03612 1755 aa6.83□□□□□ -1.32
CTR3YLR411W TY1B-ML1Q04711 1755 aaKnown RBP6.83□□□□□ -1.32
CTR3YLR411W TY1B-GR2Q12269 1755 aa6.83□□□□□ -1.32
CTR3YLR411W TY1B-OLQ12273 1755 aa6.83□□□□□ -1.32
CTR3YLR411W TY1B-PLQ12414 1755 aaKnown RBP6.83□□□□□ -1.32
CTR3YLR411W NNF1P47149 201 aa6.83□□□□□ -1.32
CTR3YLR411W NUP159P40477 1460 aa6.83□□□□□ -1.32
CTR3YLR411W IRC20Q06554 1556 aa6.82□□□□□ -1.32
CTR3YLR411W LRG1P35688 1017 aa6.82□□□□□ -1.32
CTR3YLR411W POL12P38121 705 aaPredicted RBP6.82□□□□□ -1.32
CTR3YLR411W PBY1P38254 753 aa6.82□□□□□ -1.32
CTR3YLR411W YBR184WP38299 523 aa6.82□□□□□ -1.32
CTR3YLR411W IRR1P40541 1150 aa6.82□□□□□ -1.32
CTR3YLR411W SEC26P41810 973 aaKnown RBP6.82□□□□□ -1.32
CTR3YLR411W YJL049WP47048 450 aa6.82□□□□□ -1.32
CTR3YLR411W FOL2P51601 243 aaKnown RBP6.82□□□□□ -1.32
CTR3YLR411W NAN1Q02931 896 aaKnown RBP6.82□□□□□ -1.32
CTR3YLR411W ATG13Q06628 738 aa6.82□□□□□ -1.32
CTR3YLR411W DFG16Q99234 619 aa6.82□□□□□ -1.32
CTR3YLR411W PDR5P33302 1511 aaKnown RBP6.81□□□□□ -1.32
CTR3YLR411W BI4P03879 638 aa6.81□□□□□ -1.32
CTR3YLR411W ABZ1P37254 787 aaPredicted RBP6.81□□□□□ -1.32
CTR3YLR411W NRD1P53617 575 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
CTR3YLR411W ESC1Q03661 1658 aaKnown RBP6.81□□□□□ -1.32
CTR3YLR411W TY1B-BRQ12193 1756 aa6.8□□□□□ -1.32
CTR3YLR411W TY1B-GR3Q12316 1755 aa6.8□□□□□ -1.32
CTR3YLR411W TY1B-ORQ92393 1755 aa6.8□□□□□ -1.32
CTR3YLR411W THS1P04801 734 aaKnown RBP6.8□□□□□ -1.32
CTR3YLR411W SVS1Q12254 260 aa6.8□□□□□ -1.32
CTR3YLR411W MMS1Q06211 1407 aa6.79□□□□□ -1.32
CTR3YLR411W YKL151CP36059 337 aa6.79□□□□□ -1.32
CTR3YLR411W ECL1P48235 211 aa6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 141.4 ms