RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C ATG19P35193 415 aa7.85□□□□□ -1.15
AFG2YLR397C PEX18P38855 283 aa7.85□□□□□ -1.15
AFG2YLR397C SSN8P47821 323 aa7.85□□□□□ -1.15
AFG2YLR397C CTF18P49956 741 aa7.85□□□□□ -1.15
AFG2YLR397C ATG1P53104 897 aa7.85□□□□□ -1.15
AFG2YLR397C SQS1P53866 767 aaKnown RBP7.85□□□□□ -1.15
AFG2YLR397C FAR11P53917 953 aa7.85□□□□□ -1.15
AFG2YLR397C GTR1Q00582 310 aa7.85□□□□□ -1.15
AFG2YLR397C YCG1Q06680 1035 aa7.85□□□□□ -1.15
AFG2YLR397C ENO1P00924 437 aaKnown RBP7.85□□□□□ -1.15
AFG2YLR397C PEP12P32854 288 aa7.85□□□□□ -1.15
AFG2YLR397C AXL1P40851 1208 aa7.85□□□□□ -1.15
AFG2YLR397C DIP5P53388 608 aa7.85□□□□□ -1.15
AFG2YLR397C APC5Q08683 685 aa7.85□□□□□ -1.15
AFG2YLR397C RPN8Q08723 338 aaKnown RBP7.85□□□□□ -1.15
AFG2YLR397C NTE1Q04958 1679 aa7.84□□□□□ -1.15
AFG2YLR397C LPD1P09624 499 aaKnown RBP7.84□□□□□ -1.15
AFG2YLR397C SEC2P17065 759 aa7.84□□□□□ -1.15
AFG2YLR397C GNP1P48813 663 aa7.84□□□□□ -1.15
AFG2YLR397C ATP22P50273 684 aaPredicted RBP7.84□□□□□ -1.15
AFG2YLR397C BOP3P53958 396 aa7.84□□□□□ -1.15
AFG2YLR397C NSE1Q07913 336 aa7.84□□□□□ -1.15
AFG2YLR397C MAK21Q12176 1025 aaKnown RBP7.84□□□□□ -1.15
AFG2YLR397C HSP42Q12329 375 aa7.84□□□□□ -1.15
AFG2YLR397C MLS1P30952 554 aa7.84□□□□□ -1.15
AFG2YLR397C YBR062CP38239 180 aa7.84□□□□□ -1.15
AFG2YLR397C SWD1P39706 426 aa7.84□□□□□ -1.15
AFG2YLR397C MDJ2P42834 146 aa7.84□□□□□ -1.15
AFG2YLR397C FAR7P43592 221 aa7.84□□□□□ -1.15
AFG2YLR397C STB2P46679 850 aa7.84□□□□□ -1.15
AFG2YLR397C TY4A-JP47023 414 aa7.84□□□□□ -1.15
AFG2YLR397C MCM6P53091 1017 aaKnown RBP7.84□□□□□ -1.15
AFG2YLR397C CLP1Q08685 445 aaPredicted RBP7.84□□□□□ -1.15
AFG2YLR397C RRP6Q12149 733 aaKnown RBP7.84□□□□□ -1.15
AFG2YLR397C ADE6P38972 1358 aaKnown RBP7.84□□□□□ -1.16
AFG2YLR397C YPR089WO13585 888 aa7.83□□□□□ -1.16
AFG2YLR397C ARG4P04076 463 aaPredicted RBP7.83□□□□□ -1.16
AFG2YLR397C STE5P32917 917 aa7.83□□□□□ -1.16
AFG2YLR397C TMA22P47089 198 aaPredicted RBP7.83□□□□□ -1.16
AFG2YLR397C BFA1P47113 574 aa7.83□□□□□ -1.16
AFG2YLR397C RMD1Q03441 430 aa7.83□□□□□ -1.16
AFG2YLR397C ALR1Q08269 859 aa7.83□□□□□ -1.16
AFG2YLR397C DDP1Q99321 188 aaKnown RBP7.83□□□□□ -1.16
AFG2YLR397C TY1B-JR2P47100 1755 aaKnown RBP7.83□□□□□ -1.16
AFG2YLR397C TY1B-ER2Q03619 1755 aa7.83□□□□□ -1.16
AFG2YLR397C TY1B-MR1Q04214 1755 aa7.83□□□□□ -1.16
AFG2YLR397C TY1B-MR2Q04670 1755 aaKnown RBP7.83□□□□□ -1.16
AFG2YLR397C TY1B-LR1Q12088 1755 aaKnown RBP7.83□□□□□ -1.16
AFG2YLR397C TY1B-NL1Q12112 1755 aa7.83□□□□□ -1.16
AFG2YLR397C TY1B-GR1Q12141 1755 aa7.83□□□□□ -1.16
AFG2YLR397C TY1B-BLQ12490 1755 aa7.83□□□□□ -1.16
AFG2YLR397C DOP1Q03921 1698 aa7.83□□□□□ -1.16
AFG2YLR397C PDR11P40550 1411 aa7.83□□□□□ -1.16
AFG2YLR397C CPA2P03965 1118 aaKnown RBP7.83□□□□□ -1.16
AFG2YLR397C LEU1P07264 779 aaKnown RBP7.83□□□□□ -1.16
AFG2YLR397C ILS1P09436 1072 aaKnown RBP7.83□□□□□ -1.16
AFG2YLR397C HXT3P32466 567 aaKnown RBP7.83□□□□□ -1.16
AFG2YLR397C CBF2P32504 956 aa7.83□□□□□ -1.16
AFG2YLR397C UBP15P50101 1230 aa7.83□□□□□ -1.16
AFG2YLR397C PSP2P50109 593 aaKnown RBP7.83□□□□□ -1.16
AFG2YLR397C DCP2P53550 970 aaKnown RBP7.83□□□□□ -1.16
AFG2YLR397C CTF4Q01454 927 aa7.83□□□□□ -1.16
AFG2YLR397C ISW2Q08773 1120 aa7.83□□□□□ -1.16
AFG2YLR397C HMI1Q12039 706 aa7.83□□□□□ -1.16
AFG2YLR397C DPS1P04802 557 aaKnown RBP7.82□□□□□ -1.16
AFG2YLR397C TEC1P18412 486 aa7.82□□□□□ -1.16
AFG2YLR397C REC107P21651 314 aa7.82□□□□□ -1.16
AFG2YLR397C UBA1P22515 1024 aaKnown RBP7.82□□□□□ -1.16
AFG2YLR397C UTP11P34247 250 aaPredicted RBP7.82□□□□□ -1.16
AFG2YLR397C PGM2P37012 569 aaKnown RBP7.82□□□□□ -1.16
AFG2YLR397C DYS1P38791 387 aa7.82□□□□□ -1.16
AFG2YLR397C BBC1P47068 1157 aa7.82□□□□□ -1.16
AFG2YLR397C MRM2P53123 320 aa7.82□□□□□ -1.16
AFG2YLR397C RIO1Q12196 484 aaKnown RBP7.82□□□□□ -1.16
AFG2YLR397C SEM1O94742 89 aa7.81□□□□□ -1.16
AFG2YLR397C MSS116P15424 664 aaKnown RBP7.81□□□□□ -1.16
AFG2YLR397C ITR2P30606 609 aa7.81□□□□□ -1.16
AFG2YLR397C GDA1P32621 518 aa7.81□□□□□ -1.16
AFG2YLR397C STE13P33894 931 aa7.81□□□□□ -1.16
AFG2YLR397C DBP7P36120 742 aaKnown RBP7.81□□□□□ -1.16
AFG2YLR397C GEF1P37020 779 aa7.81□□□□□ -1.16
AFG2YLR397C YHR218WP38899 603 aa7.81□□□□□ -1.16
AFG2YLR397C YHB1P39676 399 aaKnown RBP7.81□□□□□ -1.16
AFG2YLR397C OAF1P39720 1047 aaPredicted RBP7.81□□□□□ -1.16
AFG2YLR397C PEX14P53112 341 aa7.81□□□□□ -1.16
AFG2YLR397C LSC1P53598 329 aaKnown RBP7.81□□□□□ -1.16
AFG2YLR397C VPS75P53853 264 aa7.81□□□□□ -1.16
AFG2YLR397C RAT1Q02792 1006 aaKnown RBP7.81□□□□□ -1.16
AFG2YLR397C YML082WQ04533 649 aaKnown RBP7.81□□□□□ -1.16
AFG2YLR397C TAF9Q05027 157 aa7.81□□□□□ -1.16
AFG2YLR397C MAG2Q06436 670 aaKnown RBP7.81□□□□□ -1.16
AFG2YLR397C YOL057WQ08225 711 aa7.81□□□□□ -1.16
AFG2YLR397C FAP7Q12055 197 aaPredicted RBP7.81□□□□□ -1.16
AFG2YLR397C MSH5Q12175 901 aa7.81□□□□□ -1.16
AFG2YLR397C YBL111CQ3E7Y5 667 aa7.81□□□□□ -1.16
AFG2YLR397C HEM1P09950 548 aaPredicted RBP7.81□□□□□ -1.16
AFG2YLR397C RPC34P32910 317 aa7.81□□□□□ -1.16
AFG2YLR397C UBC6P33296 250 aaPredicted RBP7.81□□□□□ -1.16
AFG2YLR397C YNG2P38806 282 aaKnown RBP7.81□□□□□ -1.16
AFG2YLR397C IRR1P40541 1150 aa7.81□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms