RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C TY1B-DR3Q99231 1755 aa7.27□□□□□ -1.25
NMD4YLR363C PUF4P25339 888 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
NMD4YLR363C GDE1Q02979 1223 aa7.26□□□□□ -1.25
NMD4YLR363C SPO20Q04359 397 aa7.26□□□□□ -1.25
NMD4YLR363C RSC58Q07979 502 aa7.26□□□□□ -1.25
NMD4YLR363C NUP159P40477 1460 aa7.25□□□□□ -1.25
NMD4YLR363C YER152CP10356 443 aa7.25□□□□□ -1.25
NMD4YLR363C POL12P38121 705 aaPredicted RBP7.25□□□□□ -1.25
NMD4YLR363C PIK1P39104 1066 aa7.25□□□□□ -1.25
NMD4YLR363C FAA4P47912 694 aaKnown RBP7.25□□□□□ -1.25
NMD4YLR363C RCL1Q08096 367 aaPredicted RBP7.25□□□□□ -1.25
NMD4YLR363C GNT1Q12096 491 aa7.25□□□□□ -1.25
NMD4YLR363C DFG16Q99234 619 aa7.25□□□□□ -1.25
NMD4YLR363C TSC11P40061 1430 aa7.25□□□□□ -1.25
NMD4YLR363C BNI1P41832 1953 aa7.24□□□□□ -1.25
NMD4YLR363C SNF5P18480 905 aa7.24□□□□□ -1.25
NMD4YLR363C AIM26P32858 118 aa7.24□□□□□ -1.25
NMD4YLR363C KRI1P42846 591 aaKnown RBP7.24□□□□□ -1.25
NMD4YLR363C FOL2P51601 243 aaKnown RBP7.24□□□□□ -1.25
NMD4YLR363C VPS15P22219 1454 aa7.24□□□□□ -1.25
NMD4YLR363C DRS2P39524 1355 aa7.23□□□□□ -1.25
NMD4YLR363C INO1P11986 533 aa7.23□□□□□ -1.25
NMD4YLR363C ECL1P48235 211 aa7.23□□□□□ -1.25
NMD4YLR363C NOP7P53261 605 aaKnown RBP7.23□□□□□ -1.25
NMD4YLR363C RSB1Q08417 382 aa7.23□□□□□ -1.25
NMD4YLR363C LRG1P35688 1017 aa7.22□□□□□ -1.25
NMD4YLR363C RKM4Q12504 494 aa7.22□□□□□ -1.25
NMD4YLR363C VTH1P40438 1549 aa7.22□□□□□ -1.25
NMD4YLR363C VTH2P40890 1549 aa7.22□□□□□ -1.25
NMD4YLR363C MOT2P34909 587 aaKnown RBP7.21□□□□□ -1.26
NMD4YLR363C MMS1Q06211 1407 aa7.2□□□□□ -1.26
NMD4YLR363C MYO4P32492 1471 aa7.2□□□□□ -1.26
NMD4YLR363C SPS1P08458 490 aa7.2□□□□□ -1.26
NMD4YLR363C SNF7P39929 240 aaKnown RBP7.2□□□□□ -1.26
NMD4YLR363C YKL107WP34251 309 aa7.19□□□□□ -1.26
NMD4YLR363C AVT1P47082 602 aa7.19□□□□□ -1.26
NMD4YLR363C ENV11P53246 860 aa7.19□□□□□ -1.26
NMD4YLR363C YLR225CQ05948 407 aaKnown RBP7.19□□□□□ -1.26
NMD4YLR363C SPP382Q06411 708 aaPredicted RBP7.19□□□□□ -1.26
NMD4YLR363C VAC8P39968 578 aa7.18□□□□□ -1.26
NMD4YLR363C SEC26P41810 973 aaKnown RBP7.18□□□□□ -1.26
NMD4YLR363C YGL176CP46945 554 aa7.18□□□□□ -1.26
NMD4YLR363C FAL1Q12099 399 aaKnown RBP7.18□□□□□ -1.26
NMD4YLR363C NTE1Q04958 1679 aa7.18□□□□□ -1.26
NMD4YLR363C RPL11AP0C0W9 174 aaKnown RBP7.17□□□□□ -1.26
NMD4YLR363C BAS1P22035 811 aa7.17□□□□□ -1.26
NMD4YLR363C SEG2P34250 1132 aa7.17□□□□□ -1.26
NMD4YLR363C YFL054CP43549 646 aa7.17□□□□□ -1.26
NMD4YLR363C ALD6P54115 500 aaKnown RBP7.17□□□□□ -1.26
NMD4YLR363C YPL066WQ12194 479 aa7.17□□□□□ -1.26
NMD4YLR363C RPL11BQ3E757 174 aaPredicted RBP7.17□□□□□ -1.26
NMD4YLR363C YTA7P40340 1379 aa7.17□□□□□ -1.26
NMD4YLR363C PIN4P34217 668 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
NMD4YLR363C PNT1P38969 423 aa7.16□□□□□ -1.26
NMD4YLR363C MXR1P40029 184 aa7.16□□□□□ -1.26
NMD4YLR363C OPI10Q08202 246 aa7.16□□□□□ -1.26
NMD4YLR363C ACM1Q08981 209 aa7.16□□□□□ -1.26
NMD4YLR363C YRF1-1P0CX20 1796 aa7.15□□□□□ -1.26
NMD4YLR363C YRF1-5P0CX21 1796 aa7.15□□□□□ -1.26
NMD4YLR363C YRF1-8P0CX22 1796 aa7.15□□□□□ -1.26
NMD4YLR363C AGP1P25376 633 aa7.15□□□□□ -1.26
NMD4YLR363C ELM1P32801 640 aa7.15□□□□□ -1.26
NMD4YLR363C GEM1P39722 662 aa7.15□□□□□ -1.26
NMD4YLR363C DBP2P24783 546 aaKnown RBP7.14□□□□□ -1.27
NMD4YLR363C SBA1P28707 216 aaKnown RBP7.14□□□□□ -1.27
NMD4YLR363C ABD1P32783 436 aaPredicted RBP7.14□□□□□ -1.27
NMD4YLR363C ETP1P38748 585 aaKnown RBP7.14□□□□□ -1.27
NMD4YLR363C TY1B-JR2P47100 1755 aaKnown RBP7.14□□□□□ -1.27
NMD4YLR363C SNT2P53127 1403 aa7.14□□□□□ -1.27
NMD4YLR363C TY1B-ER2Q03619 1755 aa7.14□□□□□ -1.27
NMD4YLR363C TY1B-MR1Q04214 1755 aa7.14□□□□□ -1.27
NMD4YLR363C TY1B-MR2Q04670 1755 aaKnown RBP7.14□□□□□ -1.27
NMD4YLR363C TY1B-LR1Q12088 1755 aaKnown RBP7.14□□□□□ -1.27
NMD4YLR363C TY1B-NL1Q12112 1755 aa7.14□□□□□ -1.27
NMD4YLR363C TY1B-GR1Q12141 1755 aa7.14□□□□□ -1.27
NMD4YLR363C TY1B-BLQ12490 1755 aa7.14□□□□□ -1.27
NMD4YLR363C RPO21P04050 1733 aaKnown RBP7.13□□□□□ -1.27
NMD4YLR363C THS1P04801 734 aaKnown RBP7.13□□□□□ -1.27
NMD4YLR363C PRI2P20457 528 aa7.13□□□□□ -1.27
NMD4YLR363C UGA2P38067 497 aa7.13□□□□□ -1.27
NMD4YLR363C PRP43P53131 767 aaKnown RBP7.13□□□□□ -1.27
NMD4YLR363C ESC2Q06340 456 aa7.13□□□□□ -1.27
NMD4YLR363C YDL177CQ12257 170 aa7.13□□□□□ -1.27
NMD4YLR363C STH1P32597 1359 aa7.12□□□□□ -1.27
NMD4YLR363C RFC5P38251 354 aa7.12□□□□□ -1.27
NMD4YLR363C SIP5P40210 489 aaKnown RBP7.12□□□□□ -1.27
NMD4YLR363C NIT1P40447 199 aa7.12□□□□□ -1.27
NMD4YLR363C ATG13Q06628 738 aa7.12□□□□□ -1.27
NMD4YLR363C SVS1Q12254 260 aa7.12□□□□□ -1.27
NMD4YLR363C GAS1P22146 559 aaKnown RBP7.11□□□□□ -1.27
NMD4YLR363C SLA2P33338 968 aa7.11□□□□□ -1.27
NMD4YLR363C IRC24P40580 263 aa7.11□□□□□ -1.27
NMD4YLR363C SNO2P53823 222 aa7.11□□□□□ -1.27
NMD4YLR363C MRPL22P53881 309 aa7.11□□□□□ -1.27
NMD4YLR363C SHE9Q04172 456 aa7.11□□□□□ -1.27
NMD4YLR363C SNQ2P32568 1501 aaKnown RBP7.11□□□□□ -1.27
NMD4YLR363C RSM24Q03976 319 aa7.1□□□□□ -1.27
NMD4YLR363C TSA1P34760 196 aaKnown RBP7.09□□□□□ -1.27
NMD4YLR363C YKL069WP36088 180 aa7.09□□□□□ -1.27
NMD4YLR363C ABZ1P37254 787 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms