RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP2	YLR335W	NIP1	P32497	812 aa	Known RBP	4.81	□□□□□ -1.64
NUP2	YLR335W	DOT5	P40553	215 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	CCM1	P48237	864 aa	Predicted RBP	4.81	□□□□□ -1.64
NUP2	YLR335W	YGR021W	P53212	290 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	RPL22B	P56628	122 aa	Known RBP	4.81	□□□□□ -1.64
NUP2	YLR335W	URH1	Q04179	340 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	UBX2	Q04228	584 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	SPC24	Q04477	213 aa		4.81	□□□□□ -1.64
NUP2	YLR335W	CWC2	Q12046	339 aa	Predicted RBP	4.81	□□□□□ -1.64
NUP2	YLR335W	GFA1	P14742	717 aa	Known RBP	4.8	□□□□□ -1.64
NUP2	YLR335W	PDB1	P32473	366 aa	Known RBP	4.8	□□□□□ -1.64
NUP2	YLR335W	YME1	P32795	747 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	RPC25	P35718	212 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	PTK1	P36002	662 aa	Predicted RBP	4.8	□□□□□ -1.64
NUP2	YLR335W	OAF3	P36023	863 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	HEL1	P36113	551 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	ERG7	P38604	731 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	YHL050C	P38721	697 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	VID27	P40157	782 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	HXT8	P40886	569 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	YFH7	P43591	353 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	GIS4	Q04233	774 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	YLR001C	Q07895	862 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	MLH2	Q07980	695 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	SDH5	Q08230	162 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	NOB1	Q08444	459 aa	Known RBP	4.8	□□□□□ -1.64
NUP2	YLR335W	JIP3	O13555	125 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	ADH4	P10127	382 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	MRPS28	P21771	286 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	SEC14	P24280	304 aa	Known RBP	4.8	□□□□□ -1.64
NUP2	YLR335W	RPL8B	P29453	256 aa	Known RBP	4.8	□□□□□ -1.64
NUP2	YLR335W	TPS3	P38426	1054 aa	Known RBP	4.8	□□□□□ -1.64
NUP2	YLR335W	SAK1	P38990	1142 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	SDS3	P40505	327 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	ROG3	P43602	733 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	KAP114	P53067	1004 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	SEC5	P89102	971 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	DSE3	Q08729	430 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	SEY1	Q99287	776 aa		4.8	□□□□□ -1.64
NUP2	YLR335W	TUF1	P02992	437 aa	Known RBP	4.79	□□□□□ -1.64
NUP2	YLR335W	YMR085W	P0CF18	432 aa		4.79	□□□□□ -1.64
NUP2	YLR335W	SRO9	P25567	434 aa	Known RBP	4.79	□□□□□ -1.64
NUP2	YLR335W	YCR051W	P25631	222 aa		4.79	□□□□□ -1.64
NUP2	YLR335W	RPT3	P33298	428 aa	Known RBP	4.79	□□□□□ -1.64
NUP2	YLR335W	RCK2	P38623	610 aa		4.79	□□□□□ -1.64
NUP2	YLR335W	SIP3	P38717	1229 aa		4.79	□□□□□ -1.64
NUP2	YLR335W	SET5	P38890	526 aa	Known RBP	4.79	□□□□□ -1.64
NUP2	YLR335W	COS5	P47187	383 aa		4.79	□□□□□ -1.64
NUP2	YLR335W	DSE4	P53753	1117 aa		4.79	□□□□□ -1.64
NUP2	YLR335W	BNI5	P53890	448 aa	Known RBP	4.79	□□□□□ -1.64
NUP2	YLR335W	MDM1	Q01846	1127 aa		4.79	□□□□□ -1.64
NUP2	YLR335W	SYH1	Q02875	849 aa	Known RBP	4.79	□□□□□ -1.64
NUP2	YLR335W	VPS30	Q02948	557 aa		4.79	□□□□□ -1.64
NUP2	YLR335W	LCB5	Q06147	687 aa	Known RBP	4.79	□□□□□ -1.64
NUP2	YLR335W	CMS1	Q07897	291 aa	Known RBP	4.79	□□□□□ -1.64
NUP2	YLR335W	YOL075C	Q08234	1294 aa		4.79	□□□□□ -1.64
NUP2	YLR335W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
NUP2	YLR335W	ISY1	P21374	235 aa	Predicted RBP	4.78	□□□□□ -1.64
NUP2	YLR335W	FIG2	P25653	1609 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	SMC1	P32908	1225 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	MDL2	P33311	773 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	NIP100	P33420	868 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	YKR018C	P36114	725 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	JNM1	P36224	373 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	CCT2	P39076	527 aa	Known RBP	4.78	□□□□□ -1.64
NUP2	YLR335W	ATG32	P40458	529 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	ADA2	Q02336	434 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	CSR1	Q06705	408 aa	Known RBP	4.78	□□□□□ -1.64
NUP2	YLR335W	SIL1	Q08199	421 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	NCA2	Q12374	616 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	TUP1	P16649	713 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	ILV6	P25605	309 aa	Known RBP	4.78	□□□□□ -1.64
NUP2	YLR335W	NAM7	P30771	971 aa	Known RBP	4.78	□□□□□ -1.64
NUP2	YLR335W	KTR2	P33550	425 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	BLI1	P35727	113 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	RPC37	P36121	282 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	PET10	P36139	283 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
NUP2	YLR335W	NUP82	P40368	713 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	SAP185	P40856	1058 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	ASE1	P50275	885 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	CBK1	P53894	756 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	GTR1	Q00582	310 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	VPS16	Q03308	798 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	PRP42	Q03776	544 aa	Known RBP	4.78	□□□□□ -1.64
NUP2	YLR335W	YMR018W	Q04364	514 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	SMD2	Q06217	110 aa	Known RBP	4.78	□□□□□ -1.64
NUP2	YLR335W	ABP140	Q08641	628 aa	Known RBP	4.78	□□□□□ -1.64
NUP2	YLR335W	TCO89	Q08921	799 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	BUG1	Q12191	341 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	HIF1	Q12373	385 aa		4.78	□□□□□ -1.64
NUP2	YLR335W	ARG4	P04076	463 aa	Predicted RBP	4.77	□□□□□ -1.65
NUP2	YLR335W	NUC1	P08466	329 aa		4.77	□□□□□ -1.65
NUP2	YLR335W	PYC1	P11154	1178 aa	Known RBP	4.77	□□□□□ -1.65
NUP2	YLR335W	KRS1	P15180	591 aa	Known RBP	4.77	□□□□□ -1.65
NUP2	YLR335W	KAR3	P17119	729 aa		4.77	□□□□□ -1.65
NUP2	YLR335W	ARG1	P22768	420 aa		4.77	□□□□□ -1.65
NUP2	YLR335W	LCB1	P25045	558 aa	Known RBP	4.77	□□□□□ -1.65
NUP2	YLR335W	BUD14	P27637	709 aa		4.77	□□□□□ -1.65
NUP2	YLR335W	KIP2	P28743	706 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 100.8 ms