RNA–Protein interactions for RNA: YLR120C

YPS1, Transcript of Aspartic protease, yeast

Gene YPS1, Length 1,710 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS1	YLR120C	SOL4	P53315	255 aa		13.93	□□□□□ -0.18
YPS1	YLR120C	RBA50	Q04418	439 aa		13.93	□□□□□ -0.18
YPS1	YLR120C	NOP14	Q99207	810 aa	Known RBP	13.93	□□□□□ -0.18
YPS1	YLR120C	DPB3	P27344	201 aa		13.92	□□□□□ -0.18
YPS1	YLR120C	BIM1	P40013	344 aa		13.92	□□□□□ -0.18
YPS1	YLR120C	HUL4	P40985	892 aa		13.92	□□□□□ -0.18
YPS1	YLR120C	VAC14	Q06708	880 aa		13.92	□□□□□ -0.18
YPS1	YLR120C	PPR1	P07272	904 aa	Predicted RBP	13.91	□□□□□ -0.18
YPS1	YLR120C	ERG12	P07277	443 aa		13.91	□□□□□ -0.18
YPS1	YLR120C	MAK16	P10962	306 aa	Predicted RBP	13.91	□□□□□ -0.18
YPS1	YLR120C	PFK1	P16861	987 aa	Known RBP	13.91	□□□□□ -0.18
YPS1	YLR120C	PDC6	P26263	563 aa	Known RBP	13.91	□□□□□ -0.18
YPS1	YLR120C	EFM4	P40516	257 aa		13.91	□□□□□ -0.18
YPS1	YLR120C	BOP3	P53958	396 aa		13.91	□□□□□ -0.18
YPS1	YLR120C	FUS2	Q05670	677 aa		13.91	□□□□□ -0.18
YPS1	YLR120C	PLP2	Q12017	286 aa		13.91	□□□□□ -0.18
YPS1	YLR120C	IES1	P43579	692 aa		13.9	□□□□□ -0.18
YPS1	YLR120C	ORC4	P54791	529 aa		13.9	□□□□□ -0.18
YPS1	YLR120C	RRB1	Q04225	511 aa	Known RBP	13.9	□□□□□ -0.18
YPS1	YLR120C	PUS5	Q06244	254 aa		13.9	□□□□□ -0.18
YPS1	YLR120C	AIM7	Q12156	149 aa		13.9	□□□□□ -0.18
YPS1	YLR120C	YEL043W	P32618	956 aa		13.9	□□□□□ -0.18
YPS1	YLR120C	TPS3	P38426	1054 aa	Known RBP	13.9	□□□□□ -0.18
YPS1	YLR120C	SSB1	P11484	613 aa	Known RBP	13.89	□□□□□ -0.19
YPS1	YLR120C	RAD57	P25301	460 aa		13.89	□□□□□ -0.19
YPS1	YLR120C	CDC60	P26637	1090 aa	Known RBP	13.89	□□□□□ -0.19
YPS1	YLR120C	SSB2	P40150	613 aa	Known RBP	13.89	□□□□□ -0.19
YPS1	YLR120C	YFL034W	P43564	1073 aa		13.89	□□□□□ -0.19
YPS1	YLR120C	MAL13	P53338	473 aa		13.89	□□□□□ -0.19
YPS1	YLR120C	SEC5	P89102	971 aa		13.89	□□□□□ -0.19
YPS1	YLR120C	TCO89	Q08921	799 aa		13.89	□□□□□ -0.19
YPS1	YLR120C	ARP6	Q12509	438 aa		13.89	□□□□□ -0.19
YPS1	YLR120C	TOM70	P07213	617 aa	Known RBP	13.88	□□□□□ -0.19
YPS1	YLR120C	UGA4	P32837	571 aa		13.88	□□□□□ -0.19
YPS1	YLR120C	SMC2	P38989	1170 aa	Known RBP	13.88	□□□□□ -0.19
YPS1	YLR120C	ACA1	P39970	489 aa		13.88	□□□□□ -0.19
YPS1	YLR120C	BRE2	P43132	505 aa		13.88	□□□□□ -0.19
YPS1	YLR120C	YDL057W	Q07379	328 aa		13.88	□□□□□ -0.19
YPS1	YLR120C	APL1	P27351	700 aa		13.87	□□□□□ -0.19
YPS1	YLR120C	SRB4	P32569	687 aa		13.87	□□□□□ -0.19
YPS1	YLR120C	RRP1	P35178	278 aa	Predicted RBP	13.87	□□□□□ -0.19
YPS1	YLR120C	PHO88	P38264	188 aa	Predicted RBP	13.87	□□□□□ -0.19
YPS1	YLR120C	BUD16	P39988	312 aa		13.87	□□□□□ -0.19
YPS1	YLR120C	NBP1	P52919	319 aa	Predicted RBP	13.87	□□□□□ -0.19
YPS1	YLR120C	OPY2	Q06810	360 aa		13.87	□□□□□ -0.19
YPS1	YLR120C	UBP5	P39944	805 aa		13.87	□□□□□ -0.19
YPS1	YLR120C	XRS2	P33301	854 aa		13.86	□□□□□ -0.19
YPS1	YLR120C	PGM1	P33401	570 aa	Known RBP	13.86	□□□□□ -0.19
YPS1	YLR120C	CIN4	P39110	191 aa		13.86	□□□□□ -0.19
YPS1	YLR120C	DIP5	P53388	608 aa		13.86	□□□□□ -0.19
YPS1	YLR120C	YLR001C	Q07895	862 aa		13.86	□□□□□ -0.19
YPS1	YLR120C	TRK2	P28584	889 aa		13.85	□□□□□ -0.19
YPS1	YLR120C	VHR2	P40041	505 aa		13.85	□□□□□ -0.19
YPS1	YLR120C	ULP2	P40537	1034 aa	Predicted RBP	13.85	□□□□□ -0.19
YPS1	YLR120C	CCM1	P48237	864 aa	Predicted RBP	13.85	□□□□□ -0.19
YPS1	YLR120C	SOV1	Q04748	898 aa		13.85	□□□□□ -0.19
YPS1	YLR120C	MED1	Q12321	566 aa		13.85	□□□□□ -0.19
YPS1	YLR120C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	13.84	□□□□□ -0.19	not detected
YPS1	YLR120C	RAD18	P10862	487 aa		13.84	□□□□□ -0.19
YPS1	YLR120C	TUP1	P16649	713 aa		13.84	□□□□□ -0.19
YPS1	YLR120C	CCT4	P39078	528 aa	Known RBP	13.84	□□□□□ -0.19
YPS1	YLR120C	LIF1	P53150	421 aa		13.84	□□□□□ -0.19
YPS1	YLR120C	YML037C	Q03703	340 aa		13.84	□□□□□ -0.19
YPS1	YLR120C	SUB2	Q07478	446 aa	Known RBP	13.84	□□□□□ -0.19
YPS1	YLR120C	TOM1	Q03280	3268 aa		13.84	□□□□□ -0.19
YPS1	YLR120C	SUP45	P12385	437 aa	Known RBP	13.84	□□□□□ -0.19
YPS1	YLR120C	DAL7	P21826	554 aa		13.84	□□□□□ -0.19
YPS1	YLR120C	MRF1	P30775	413 aa	Predicted RBP	13.84	□□□□□ -0.19
YPS1	YLR120C	SMF1	P38925	575 aa		13.84	□□□□□ -0.19
YPS1	YLR120C	SMC3	P47037	1230 aa		13.84	□□□□□ -0.19
YPS1	YLR120C	NGL3	Q03210	505 aa		13.84	□□□□□ -0.19
YPS1	YLR120C	ATG23	Q06671	453 aa		13.84	□□□□□ -0.19
YPS1	YLR120C	GIN4	Q12263	1142 aa		13.84	□□□□□ -0.19
YPS1	YLR120C	GAL2	P13181	574 aa		13.83	□□□□□ -0.2
YPS1	YLR120C	CKI1	P20485	582 aa		13.83	□□□□□ -0.2
YPS1	YLR120C	NIP100	P33420	868 aa		13.83	□□□□□ -0.2
YPS1	YLR120C	YPR078C	Q06813	372 aa		13.83	□□□□□ -0.2
YPS1	YLR120C	WHI4	Q07655	649 aa	Known RBP	13.83	□□□□□ -0.2
YPS1	YLR120C	YPL277C	Q08989	487 aa		13.83	□□□□□ -0.2
YPS1	YLR120C	OSH2	Q12451	1283 aa		13.83	□□□□□ -0.2
YPS1	YLR120C	SRD1	P09007	221 aa		13.82	□□□□□ -0.2
YPS1	YLR120C	CLN3	P13365	580 aa		13.82	□□□□□ -0.2
YPS1	YLR120C	RPO26	P20435	155 aa		13.82	□□□□□ -0.2
YPS1	YLR120C	TAD1	P53065	400 aa		13.82	□□□□□ -0.2
YPS1	YLR120C	CNM67	P53865	581 aa	Known RBP	13.82	□□□□□ -0.2
YPS1	YLR120C	RKM4	Q12504	494 aa		13.82	□□□□□ -0.2
YPS1	YLR120C	CSR2	Q12734	1121 aa		13.82	□□□□□ -0.2
YPS1	YLR120C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	13.81	□□□□□ -0.2	RIP-Chip
YPS1	YLR120C	ESS1	P22696	170 aa		13.81	□□□□□ -0.2
YPS1	YLR120C	SMC1	P32908	1225 aa		13.81	□□□□□ -0.2
YPS1	YLR120C	BYE1	P36106	594 aa		13.81	□□□□□ -0.2
YPS1	YLR120C	GPD2	P41911	440 aa	Known RBP	13.81	□□□□□ -0.2
YPS1	YLR120C	TOF1	P53840	1238 aa		13.81	□□□□□ -0.2
YPS1	YLR120C	TMA64	Q04600	565 aa	Known RBP	13.81	□□□□□ -0.2
YPS1	YLR120C	HXT1	P32465	570 aa		13.81	□□□□□ -0.2
YPS1	YLR120C	VID30	P53076	958 aa		13.81	□□□□□ -0.2
YPS1	YLR120C	ALD6	P54115	500 aa	Known RBP	13.81	□□□□□ -0.2
YPS1	YLR120C	GIR2	Q03768	265 aa	Predicted RBP	13.81	□□□□□ -0.2
YPS1	YLR120C	YKL068W-A	Q3E826	78 aa		13.81	□□□□□ -0.2
YPS1	YLR120C	SAM1	P10659	382 aa	Known RBP	13.8	□□□□□ -0.2

Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms