RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	NAM7	P30771	971 aa	Known RBP	2.77	□□□□□ -1.97
RIC1	YLR039C	PPH3	P32345	308 aa		2.77	□□□□□ -1.97
RIC1	YLR039C	CDC12	P32468	407 aa	Known RBP	2.77	□□□□□ -1.97
RIC1	YLR039C	SIT1	P39980	628 aa		2.77	□□□□□ -1.97
RIC1	YLR039C	ATG36	P46983	293 aa		2.77	□□□□□ -1.97
RIC1	YLR039C	TY4A-J	P47023	414 aa		2.77	□□□□□ -1.97
RIC1	YLR039C	TDA6	Q06466	467 aa		2.77	□□□□□ -1.97
RIC1	YLR039C	ATG13	Q06628	738 aa		2.77	□□□□□ -1.97
RIC1	YLR039C	YSC84	P32793	468 aa		2.77	□□□□□ -1.97
RIC1	YLR039C	UGA2	P38067	497 aa		2.77	□□□□□ -1.97
RIC1	YLR039C	YRO2	P38079	344 aa		2.77	□□□□□ -1.97
RIC1	YLR039C	TOK1	P40310	691 aa		2.77	□□□□□ -1.97
RIC1	YLR039C	GIC2	Q06648	383 aa		2.77	□□□□□ -1.97
RIC1	YLR039C	PEX6	P33760	1030 aa		2.76	□□□□□ -1.97
RIC1	YLR039C	SLN1	P39928	1220 aa	Predicted RBP	2.76	□□□□□ -1.97
RIC1	YLR039C	SEC26	P41810	973 aa	Known RBP	2.76	□□□□□ -1.97
RIC1	YLR039C	THI72	Q08579	599 aa		2.76	□□□□□ -1.97
RIC1	YLR039C	AI3	P03877	415 aa		2.76	□□□□□ -1.97
RIC1	YLR039C	BI4	P03879	638 aa		2.76	□□□□□ -1.97
RIC1	YLR039C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.76	□□□□□ -1.97	not detected
RIC1	YLR039C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	2.76	□□□□□ -1.97	not detected
RIC1	YLR039C	VBA3	P25594	458 aa		2.76	□□□□□ -1.97
RIC1	YLR039C	PRO1	P32264	428 aa		2.76	□□□□□ -1.97
RIC1	YLR039C	SNF7	P39929	240 aa	Known RBP	2.76	□□□□□ -1.97
RIC1	YLR039C	GYP8	P43570	497 aa		2.76	□□□□□ -1.97
RIC1	YLR039C	YJR008W	P47085	338 aa		2.76	□□□□□ -1.97
RIC1	YLR039C	MTC3	P53077	123 aa		2.76	□□□□□ -1.97
RIC1	YLR039C	HOS3	Q02959	697 aa	Known RBP	2.76	□□□□□ -1.97
RIC1	YLR039C	UTP14	Q04500	899 aa	Known RBP	2.76	□□□□□ -1.97
RIC1	YLR039C	ACM1	Q08981	209 aa		2.76	□□□□□ -1.97
RIC1	YLR039C	MDM12	Q92328	271 aa		2.76	□□□□□ -1.97
RIC1	YLR039C	CDC11	P32458	415 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	DOM34	P33309	386 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	DSS1	P39112	969 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	SAH1	P39954	449 aa	Known RBP	2.75	□□□□□ -1.97
RIC1	YLR039C	UGO1	Q03327	502 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	AI1	P03875	834 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	CDC9	P04819	755 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	SSB1	P11484	613 aa	Known RBP	2.75	□□□□□ -1.97
RIC1	YLR039C	SAM35	P14693	329 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	RAD53	P22216	821 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	YCK2	P23292	546 aa	Known RBP	2.75	□□□□□ -1.97
RIC1	YLR039C	WHI3	P34761	661 aa	Known RBP	2.75	□□□□□ -1.97
RIC1	YLR039C	TOM20	P35180	183 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	BAP2	P38084	609 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	AKR1	P39010	764 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	SSB2	P40150	613 aa	Known RBP	2.75	□□□□□ -1.97
RIC1	YLR039C	YLR001C	Q07895	862 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	YVC1	Q12324	675 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	SFA1	P32771	386 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	TSL1	P38427	1098 aa	Known RBP	2.75	□□□□□ -1.97
RIC1	YLR039C	RPN3	P40016	523 aa	Known RBP	2.75	□□□□□ -1.97
RIC1	YLR039C	YNL193W	P53870	558 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	SFB2	P53953	876 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	LCD1	Q04377	747 aa		2.75	□□□□□ -1.97
RIC1	YLR039C	HRK1	Q08732	759 aa	Known RBP	2.75	□□□□□ -1.97
RIC1	YLR039C	GEM1	P39722	662 aa		2.74	□□□□□ -1.97
RIC1	YLR039C	ALG2	P43636	503 aa		2.74	□□□□□ -1.97
RIC1	YLR039C	GPG1	P53130	126 aa		2.74	□□□□□ -1.97
RIC1	YLR039C	YDR215C	Q12240	137 aa		2.74	□□□□□ -1.97
RIC1	YLR039C	TRK2	P28584	889 aa		2.74	□□□□□ -1.97
RIC1	YLR039C	SPC29	P33419	253 aa		2.74	□□□□□ -1.97
RIC1	YLR039C	GIC1	P38785	314 aa		2.74	□□□□□ -1.97
RIC1	YLR039C	MDM38	Q08179	573 aa		2.74	□□□□□ -1.97
RIC1	YLR039C	MCA1	Q08601	432 aa		2.74	□□□□□ -1.97
RIC1	YLR039C	ADE8	P04161	214 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	SFP1	P32432	683 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	MCX1	P38323	520 aa	Predicted RBP	2.73	□□□□□ -1.97
RIC1	YLR039C	YJR120W	P47157	116 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	TNA1	P53322	534 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	XYL2	Q07993	356 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
RIC1	YLR039C	RSC6	P25632	483 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	HLJ1	P48353	224 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	YGR283C	P53336	341 aa	Predicted RBP	2.73	□□□□□ -1.97
RIC1	YLR039C	SRP1	Q02821	542 aa	Known RBP	2.73	□□□□□ -1.97
RIC1	YLR039C	SRD1	P09007	221 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	RAD18	P10862	487 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	REC104	P33323	182 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	ARI1	P53111	347 aa	Known RBP	2.73	□□□□□ -1.97
RIC1	YLR039C	TPO2	P53283	614 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	FOL1	P53848	824 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	NSG2	P53898	299 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	SRT1	Q03175	343 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	THI73	Q07904	523 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	ENV7	Q12003	364 aa		2.73	□□□□□ -1.97
RIC1	YLR039C	PCL2	P25693	308 aa		2.72	□□□□□ -1.97
RIC1	YLR039C	ABZ1	P37254	787 aa	Predicted RBP	2.72	□□□□□ -1.97
RIC1	YLR039C	YBR238C	P38330	731 aa	Known RBP	2.72	□□□□□ -1.97
RIC1	YLR039C	YHL012W	P38709	493 aa		2.72	□□□□□ -1.97
RIC1	YLR039C	YGR237C	P50089	785 aa		2.72	□□□□□ -1.97
RIC1	YLR039C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
RIC1	YLR039C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
RIC1	YLR039C	PER1	P25625	357 aa		2.72	□□□□□ -1.97
RIC1	YLR039C	MMM1	P41800	426 aa		2.72	□□□□□ -1.97
RIC1	YLR039C	HFM1	P51979	1187 aa		2.72	□□□□□ -1.97
RIC1	YLR039C	MET13	P53128	600 aa		2.72	□□□□□ -1.97
RIC1	YLR039C	RSC3	Q06639	885 aa		2.72	□□□□□ -1.97
RIC1	YLR039C	ACE2	P21192	770 aa		2.71	□□□□□ -1.97
RIC1	YLR039C	MTC2	P34246	357 aa		2.71	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 70.6 ms