RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C SSB1P11484 613 aaKnown RBP2.57□□□□□ -2
VPS13YLL040C PRP16P15938 1071 aaPredicted RBP2.57□□□□□ -2
VPS13YLL040C BEM4P39011 633 aa2.57□□□□□ -2
VPS13YLL040C SSB2P40150 613 aaKnown RBP2.57□□□□□ -2
VPS13YLL040C CNM67P53865 581 aaKnown RBP2.57□□□□□ -2
VPS13YLL040C BCH2P36122 765 aa2.57□□□□□ -2
VPS13YLL040C SPP381P38282 291 aaPredicted RBP2.57□□□□□ -2
VPS13YLL040C ARB1P40024 610 aaKnown RBP2.57□□□□□ -2
VPS13YLL040C MRX1P40050 688 aa2.57□□□□□ -2
VPS13YLL040C TRS85P46944 698 aa2.57□□□□□ -2
VPS13YLL040C SAE2P46946 345 aa2.57□□□□□ -2
VPS13YLL040C YGL082WP53155 381 aa2.57□□□□□ -2
VPS13YLL040C HEL2Q05580 639 aaKnown RBP2.57□□□□□ -2
VPS13YLL040C YVC1Q12324 675 aa2.57□□□□□ -2
VPS13YLL040C TCP1P12612 559 aaKnown RBP2.57□□□□□ -2
VPS13YLL040C REB1P21538 810 aa2.57□□□□□ -2
VPS13YLL040C KRE2P27809 442 aa2.57□□□□□ -2
VPS13YLL040C YET1P35723 206 aa2.57□□□□□ -2
VPS13YLL040C YBR032WP38223 100 aa2.57□□□□□ -2
VPS13YLL040C RPT6Q01939 405 aaKnown RBP2.57□□□□□ -2
VPS13YLL040C YMR102CQ03177 834 aa2.57□□□□□ -2
VPS13YLL040C TDA9Q04545 1251 aa2.57□□□□□ -2
VPS13YLL040C GPM3Q12326 303 aa2.57□□□□□ -2
VPS13YLL040C CLB3P24870 427 aa2.57□□□□□ -2
VPS13YLL040C MSH2P25847 964 aa2.57□□□□□ -2
VPS13YLL040C VPH2P32341 215 aa2.57□□□□□ -2
VPS13YLL040C ARC1P46672 376 aaKnown RBP2.57□□□□□ -2
VPS13YLL040C SRC1Q03707 834 aa2.57□□□□□ -2
VPS13YLL040C SEC14P24280 304 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C PLC1P32383 869 aa2.56□□□□□ -2
VPS13YLL040C ZUO1P32527 433 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C TFC4P33339 1025 aa2.56□□□□□ -2
VPS13YLL040C GRX7P38068 203 aa2.56□□□□□ -2
VPS13YLL040C YFH7P43591 353 aa2.56□□□□□ -2
VPS13YLL040C VPS70P47161 811 aa2.56□□□□□ -2
VPS13YLL040C KAP114P53067 1004 aa2.56□□□□□ -2
VPS13YLL040C PIB2P53191 635 aa2.56□□□□□ -2
VPS13YLL040C CLB1P24868 471 aa2.56□□□□□ -2
VPS13YLL040C TFC3P34111 1160 aa2.56□□□□□ -2
VPS13YLL040C SHM1P37292 490 aaPredicted RBP2.56□□□□□ -2
VPS13YLL040C ARI1P53111 347 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C CUS1Q02554 436 aaPredicted RBP2.56□□□□□ -2
VPS13YLL040C YDR341CQ05506 607 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C ILV6P25605 309 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C BOI1P38041 980 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C YHL050CP38721 697 aa2.56□□□□□ -2
VPS13YLL040C PAN5P38787 379 aa2.56□□□□□ -2
VPS13YLL040C SEC28P40509 296 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C TMA22P47089 198 aaPredicted RBP2.56□□□□□ -2
VPS13YLL040C HLJ1P48353 224 aa2.56□□□□□ -2
VPS13YLL040C SNU71P53207 620 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C FOX2Q02207 900 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C RBA50Q04418 439 aa2.56□□□□□ -2
VPS13YLL040C CDC53Q12018 815 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C CDC6P09119 513 aa2.56□□□□□ -2
VPS13YLL040C SEC8P32855 1065 aa2.56□□□□□ -2
VPS13YLL040C PRP40P33203 583 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C HSM3P38348 480 aa2.56□□□□□ -2
VPS13YLL040C SHE10P53075 577 aa2.56□□□□□ -2
VPS13YLL040C EBS1Q03466 884 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C ISY1P21374 235 aaPredicted RBP2.56□□□□□ -2
VPS13YLL040C UGA4P32837 571 aa2.56□□□□□ -2
VPS13YLL040C PCI8P40512 444 aa2.56□□□□□ -2
VPS13YLL040C BRO1P48582 844 aa2.56□□□□□ -2
VPS13YLL040C SXM1Q04175 944 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C GYL1Q04322 720 aa2.56□□□□□ -2
VPS13YLL040C ALR1Q08269 859 aa2.56□□□□□ -2
VPS13YLL040C GRE2Q12068 342 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C PDC1P06169 563 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C SPT2P06843 333 aaPredicted RBP2.56□□□□□ -2
VPS13YLL040C MTF2P10849 440 aa2.56□□□□□ -2
VPS13YLL040C SNA3P14359 133 aa2.56□□□□□ -2
VPS13YLL040C YKL091CP33324 310 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C STO1P34160 861 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C OLA1P38219 394 aaKnown RBP2.56□□□□□ -2
VPS13YLL040C ARG2P40360 574 aa2.56□□□□□ -2
VPS13YLL040C KIN1P13185 1064 aa2.56□□□□□ -2
VPS13YLL040C SWC3P31376 625 aa2.56□□□□□ -2
VPS13YLL040C SIC1P38634 284 aa2.56□□□□□ -2
VPS13YLL040C MSN5P52918 1224 aa2.56□□□□□ -2
VPS13YLL040C ZDS2P54786 942 aa2.56□□□□□ -2
VPS13YLL040C RCF1Q03713 159 aa2.56□□□□□ -2
VPS13YLL040C YME2P32843 850 aa2.56□□□□□ -2
VPS13YLL040C PEX18P38855 283 aa2.56□□□□□ -2
VPS13YLL040C TDA10P42938 290 aa2.56□□□□□ -2
VPS13YLL040C SSL2Q00578 843 aa2.56□□□□□ -2
VPS13YLL040C NHA1Q99271 985 aa2.56□□□□□ -2
VPS13YLL040C CLN3P13365 580 aa2.55□□□□□ -2
VPS13YLL040C CAP1P28495 268 aaKnown RBP2.55□□□□□ -2
VPS13YLL040C DEF1P35732 738 aaKnown RBP2.55□□□□□ -2
VPS13YLL040C DOT5P40553 215 aa2.55□□□□□ -2
VPS13YLL040C YPR078CQ06813 372 aa2.55□□□□□ -2
VPS13YLL040C APC5Q08683 685 aa2.55□□□□□ -2
VPS13YLL040C WRS1Q12109 432 aaKnown RBP2.55□□□□□ -2
VPS13YLL040C AVL9Q12500 764 aa2.55□□□□□ -2
VPS13YLL040C YEL076C-AP0CX16 216 aa2.55□□□□□ -2
VPS13YLL040C YLR464WP0CX17 216 aa2.55□□□□□ -2
VPS13YLL040C SPT21P35209 758 aa2.55□□□□□ -2
VPS13YLL040C HEK2P38199 381 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
VPS13YLL040C YEL076CP39971 216 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 82.3 ms