RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeastyeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKG1YKR100C EDE1P34216 1381 aa8.35□□□□□ -1.07
SKG1YKR100C YPR117WQ06116 2489 aa8.35□□□□□ -1.07
SKG1YKR100C HSP78P33416 811 aa8.35□□□□□ -1.07
SKG1YKR100C POL12P38121 705 aaPredicted RBP8.35□□□□□ -1.07
SKG1YKR100C YJL045WP47052 634 aa8.35□□□□□ -1.07
SKG1YKR100C TAF13P11747 167 aa8.34□□□□□ -1.07
SKG1YKR100C PTC7P38797 343 aa8.34□□□□□ -1.07
SKG1YKR100C VPS53P47061 822 aa8.34□□□□□ -1.07
SKG1YKR100C ASF1P32447 279 aa8.33□□□□□ -1.08
SKG1YKR100C SAM35P14693 329 aa8.32□□□□□ -1.08
SKG1YKR100C YHL012WP38709 493 aa8.32□□□□□ -1.08
SKG1YKR100C GTS1P40956 396 aa8.32□□□□□ -1.08
SKG1YKR100C ROD1Q02805 837 aa8.32□□□□□ -1.08
SKG1YKR100C DFG16Q99234 619 aa8.32□□□□□ -1.08
SKG1YKR100C RRP5Q05022 1729 aaKnown RBP8.32□□□□□ -1.08
SKG1YKR100C GEA1P47102 1408 aaPredicted RBP8.31□□□□□ -1.08
SKG1YKR100C MRL1Q06815 381 aa8.31□□□□□ -1.08
SKG1YKR100C LPX1Q12405 387 aaKnown RBP8.31□□□□□ -1.08
SKG1YKR100C PTC5Q12511 572 aa8.31□□□□□ -1.08
SKG1YKR100C GCR1P07261 785 aa8.3□□□□□ -1.08
SKG1YKR100C PEP7P32609 515 aa8.3□□□□□ -1.08
SKG1YKR100C SEG2P34250 1132 aa8.3□□□□□ -1.08
SKG1YKR100C TYS1P36421 394 aaKnown RBP8.3□□□□□ -1.08
SKG1YKR100C ALG3P38179 458 aa8.3□□□□□ -1.08
SKG1YKR100C GNP1P48813 663 aa8.3□□□□□ -1.08
SKG1YKR100C SIW14P53965 281 aa8.3□□□□□ -1.08
SKG1YKR100C OYE2Q03558 400 aaKnown RBP8.3□□□□□ -1.08
SKG1YKR100C ORC3P54790 616 aa8.29□□□□□ -1.08
SKG1YKR100C RAT1Q02792 1006 aaKnown RBP8.29□□□□□ -1.08
SKG1YKR100C ESF1Q06344 628 aaKnown RBP8.29□□□□□ -1.08
SKG1YKR100C KIP1P28742 1111 aa8.28□□□□□ -1.08
SKG1YKR100C HXT13P39924 564 aa8.28□□□□□ -1.08
SKG1YKR100C HXT17P53631 564 aa8.28□□□□□ -1.08
SKG1YKR100C HXT15P54854 567 aa8.28□□□□□ -1.08
SKG1YKR100C MKK2P32491 506 aa8.27□□□□□ -1.09
SKG1YKR100C YSC84P32793 468 aa8.27□□□□□ -1.09
SKG1YKR100C MDL2P33311 773 aa8.27□□□□□ -1.09
SKG1YKR100C GPB2P39717 880 aa8.27□□□□□ -1.09
SKG1YKR100C IRC24P40580 263 aa8.27□□□□□ -1.09
SKG1YKR100C ECL1P48235 211 aa8.27□□□□□ -1.09
SKG1YKR100C ELM1P32801 640 aa8.26□□□□□ -1.09
SKG1YKR100C NPR2P39923 615 aa8.26□□□□□ -1.09
SKG1YKR100C ENT3P47160 408 aa8.25□□□□□ -1.09
SKG1YKR100C AOS1Q06624 347 aa8.25□□□□□ -1.09
SKG1YKR100C POM152P39685 1337 aa8.25□□□□□ -1.09
SKG1YKR100C URB1P34241 1764 aaKnown RBP8.25□□□□□ -1.09
SKG1YKR100C SRO9P25567 434 aaKnown RBP8.24□□□□□ -1.09
SKG1YKR100C RNQ1P25367 405 aa8.23□□□□□ -1.09
SKG1YKR100C RMD1Q03441 430 aa8.23□□□□□ -1.09
SKG1YKR100C RCL1Q08096 367 aaPredicted RBP8.23□□□□□ -1.09
SKG1YKR100C SYP1P25623 870 aaKnown RBP8.21□□□□□ -1.1
SKG1YKR100C AIM26P32858 118 aa8.21□□□□□ -1.1
SKG1YKR100C UBP3Q01477 912 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1not detected
SKG1YKR100C YPL260WQ08977 551 aa8.21□□□□□ -1.1
SKG1YKR100C SPO21Q12411 609 aa8.21□□□□□ -1.1
SKG1YKR100C TOR1P35169 2470 aa8.2□□□□□ -1.1
SKG1YKR100C GAS1P22146 559 aaKnown RBP8.2□□□□□ -1.1
SKG1YKR100C HOS3Q02959 697 aaKnown RBP8.2□□□□□ -1.1
SKG1YKR100C RSC58Q07979 502 aa8.2□□□□□ -1.1
SKG1YKR100C RTT10Q08924 1013 aa8.2□□□□□ -1.1
SKG1YKR100C ETP1P38748 585 aaKnown RBP8.19□□□□□ -1.1
SKG1YKR100C TNA1P53322 534 aa8.19□□□□□ -1.1
SKG1YKR100C COQ4O13525 335 aa8.18□□□□□ -1.1
SKG1YKR100C RER2P35196 286 aa8.18□□□□□ -1.1
SKG1YKR100C CNN1P43618 361 aa8.18□□□□□ -1.1
SKG1YKR100C YDL177CQ12257 170 aa8.18□□□□□ -1.1
SKG1YKR100C RSF2P46974 1380 aa8.18□□□□□ -1.1
SKG1YKR100C RAD27P26793 382 aa8.17□□□□□ -1.1
SKG1YKR100C TSA1P34760 196 aaKnown RBP8.17□□□□□ -1.1
SKG1YKR100C BAP2P38084 609 aa8.17□□□□□ -1.1
SKG1YKR100C MAL31P38156 614 aa8.17□□□□□ -1.1
SKG1YKR100C RGD1P38339 666 aa8.17□□□□□ -1.1
SKG1YKR100C RPN3P40016 523 aaKnown RBP8.17□□□□□ -1.1
SKG1YKR100C NIT1P40447 199 aa8.17□□□□□ -1.1
SKG1YKR100C DOT5P40553 215 aa8.17□□□□□ -1.1
SKG1YKR100C NBA1Q08229 501 aaKnown RBP8.17□□□□□ -1.1
SKG1YKR100C SNF5P18480 905 aa8.16□□□□□ -1.1
SKG1YKR100C DBP5P20449 482 aaKnown RBP8.16□□□□□ -1.1
SKG1YKR100C MLS1P30952 554 aa8.16□□□□□ -1.1
SKG1YKR100C DUT1P33317 147 aa8.16□□□□□ -1.1
SKG1YKR100C CDA2Q06703 312 aa8.16□□□□□ -1.1
SKG1YKR100C CFT1Q06632 1357 aaKnown RBP8.15□□□□□ -1.1
SKG1YKR100C PET112P33893 541 aa8.15□□□□□ -1.1
SKG1YKR100C CCZ1P38273 704 aa8.15□□□□□ -1.1
SKG1YKR100C FOL2P51601 243 aaKnown RBP8.15□□□□□ -1.1
SKG1YKR100C PRP43P53131 767 aaKnown RBP8.15□□□□□ -1.1
SKG1YKR100C YNR029CP53729 429 aaKnown RBP8.15□□□□□ -1.1
SKG1YKR100C SQS1P53866 767 aaKnown RBP8.15□□□□□ -1.1
SKG1YKR100C SNF2P22082 1703 aa8.15□□□□□ -1.11
SKG1YKR100C YER152CP10356 443 aa8.14□□□□□ -1.11
SKG1YKR100C MPH1P40562 993 aa8.14□□□□□ -1.11
SKG1YKR100C YFL054CP43549 646 aa8.14□□□□□ -1.11
SKG1YKR100C TMA46Q12000 345 aaKnown RBP8.14□□□□□ -1.11
SKG1YKR100C FKS3Q04952 1785 aa8.14□□□□□ -1.11
SKG1YKR100C SRB8P25648 1427 aa8.13□□□□□ -1.11
SKG1YKR100C KRE5P22023 1365 aa8.13□□□□□ -1.11
SKG1YKR100C SPS1P08458 490 aa8.13□□□□□ -1.11
SKG1YKR100C UBP5P39944 805 aa8.13□□□□□ -1.11
SKG1YKR100C EAF6P47128 113 aa8.13□□□□□ -1.11
SKG1YKR100C YVH1Q02256 364 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 118.5 ms