RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	BRE4	Q07660	1125 aa		6.09	□□□□□ -1.43
EBP2	YKL172W	FMP25	Q08023	583 aa		6.09	□□□□□ -1.43
EBP2	YKL172W	YLL058W	Q12198	575 aa		6.09	□□□□□ -1.43
EBP2	YKL172W	HSP60	P19882	572 aa	Known RBP	6.08	□□□□□ -1.44
EBP2	YKL172W	RPL8B	P29453	256 aa	Known RBP	6.08	□□□□□ -1.44
EBP2	YKL172W	SEC26	P41810	973 aa	Known RBP	6.08	□□□□□ -1.44
EBP2	YKL172W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.08	□□□□□ -1.44	not detected
EBP2	YKL172W	PFD1	P46988	109 aa		6.08	□□□□□ -1.44
EBP2	YKL172W	UTP8	P53276	713 aa	Known RBP	6.08	□□□□□ -1.44
EBP2	YKL172W	EAF1	Q06337	982 aa		6.08	□□□□□ -1.44
EBP2	YKL172W	CDC11	P32458	415 aa		6.07	□□□□□ -1.44
EBP2	YKL172W	YKL091C	P33324	310 aa	Known RBP	6.07	□□□□□ -1.44
EBP2	YKL172W	MAC1	P35192	417 aa		6.07	□□□□□ -1.44
EBP2	YKL172W	OSW7	P43611	510 aa		6.07	□□□□□ -1.44
EBP2	YKL172W	INP52	P50942	1183 aa		6.07	□□□□□ -1.44
EBP2	YKL172W	HUL5	P53119	910 aa		6.07	□□□□□ -1.44
EBP2	YKL172W	ORC1	P54784	914 aa	Predicted RBP	6.07	□□□□□ -1.44
EBP2	YKL172W	DUS3	Q06053	668 aa	Known RBP	6.07	□□□□□ -1.44
EBP2	YKL172W	ARE1	P25628	610 aa		6.06	□□□□□ -1.44
EBP2	YKL172W	GGA2	P38817	585 aa	Known RBP	6.06	□□□□□ -1.44
EBP2	YKL172W	YFL054C	P43549	646 aa		6.06	□□□□□ -1.44
EBP2	YKL172W	ALR2	P43553	858 aa		6.06	□□□□□ -1.44
EBP2	YKL172W	YGR125W	P53273	1036 aa		6.06	□□□□□ -1.44
EBP2	YKL172W	RPN4	Q03465	531 aa		6.06	□□□□□ -1.44
EBP2	YKL172W	YDR306C	Q06640	478 aa		6.06	□□□□□ -1.44
EBP2	YKL172W	FLC1	Q08967	793 aa		6.06	□□□□□ -1.44
EBP2	YKL172W	SVS1	Q12254	260 aa		6.06	□□□□□ -1.44
EBP2	YKL172W	LPX1	Q12405	387 aa	Known RBP	6.06	□□□□□ -1.44
EBP2	YKL172W	BI4	P03879	638 aa		6.05	□□□□□ -1.44
EBP2	YKL172W	PPH3	P32345	308 aa		6.05	□□□□□ -1.44
EBP2	YKL172W	AAR2	P32357	355 aa	Predicted RBP	6.05	□□□□□ -1.44
EBP2	YKL172W	HSP78	P33416	811 aa		6.05	□□□□□ -1.44
EBP2	YKL172W	RFC5	P38251	354 aa		6.05	□□□□□ -1.44
EBP2	YKL172W	SIT1	P39980	628 aa		6.05	□□□□□ -1.44
EBP2	YKL172W	HUL4	P40985	892 aa		6.05	□□□□□ -1.44
EBP2	YKL172W	AIM44	Q99299	758 aa		6.05	□□□□□ -1.44
EBP2	YKL172W	CIT1	P00890	479 aa		6.04	□□□□□ -1.44
EBP2	YKL172W	GAL11	P19659	1081 aa		6.04	□□□□□ -1.44
EBP2	YKL172W	ACE2	P21192	770 aa		6.04	□□□□□ -1.44
EBP2	YKL172W	CDC12	P32468	407 aa	Known RBP	6.04	□□□□□ -1.44
EBP2	YKL172W	YHR020W	P38708	688 aa	Known RBP	6.04	□□□□□ -1.44
EBP2	YKL172W	SAH1	P39954	449 aa	Known RBP	6.04	□□□□□ -1.44
EBP2	YKL172W	ADE8	P04161	214 aa		6.03	□□□□□ -1.44
EBP2	YKL172W	KIN2	P13186	1147 aa	Known RBP	6.03	□□□□□ -1.44
EBP2	YKL172W	CCC2	P38995	1004 aa		6.03	□□□□□ -1.44
EBP2	YKL172W	CHZ1	P40019	153 aa	Predicted RBP	6.03	□□□□□ -1.44
EBP2	YKL172W	CTH1	P47976	325 aa		6.03	□□□□□ -1.44
EBP2	YKL172W	HRQ1	Q05549	1077 aa		6.03	□□□□□ -1.44
EBP2	YKL172W	YDL124W	Q07551	312 aa	Known RBP	6.03	□□□□□ -1.44
EBP2	YKL172W	RSM24	Q03976	319 aa		6.02	□□□□□ -1.45
EBP2	YKL172W	UBX5	Q06682	500 aa		6.02	□□□□□ -1.45
EBP2	YKL172W	MDM38	Q08179	573 aa		6.02	□□□□□ -1.45
EBP2	YKL172W	FUN30	P31380	1131 aa		6.01	□□□□□ -1.45
EBP2	YKL172W	HBS1	P32769	611 aa	Known RBP	6.01	□□□□□ -1.45
EBP2	YKL172W	YKR078W	P36158	585 aa	Known RBP	6.01	□□□□□ -1.45
EBP2	YKL172W	RPC82	P32349	654 aa		6	□□□□□ -1.45
EBP2	YKL172W	RSP5	P39940	809 aa	Known RBP	6	□□□□□ -1.45
EBP2	YKL172W	ECL1	P48235	211 aa		6	□□□□□ -1.45
EBP2	YKL172W	TAF8	Q03750	510 aa		6	□□□□□ -1.45
EBP2	YKL172W	OSW2	Q12202	724 aa		6	□□□□□ -1.45
EBP2	YKL172W	YKL151C	P36059	337 aa		5.99	□□□□□ -1.45
EBP2	YKL172W	POL12	P38121	705 aa	Predicted RBP	5.99	□□□□□ -1.45
EBP2	YKL172W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.99	□□□□□ -1.45	not detected
EBP2	YKL172W	GYP7	P48365	746 aa		5.99	□□□□□ -1.45
EBP2	YKL172W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.99	□□□□□ -1.45	not detected
EBP2	YKL172W	SRT1	Q03175	343 aa		5.99	□□□□□ -1.45
EBP2	YKL172W	SIZ1	Q04195	904 aa		5.99	□□□□□ -1.45
EBP2	YKL172W	LCD1	Q04377	747 aa		5.99	□□□□□ -1.45
EBP2	YKL172W	DFG16	Q99234	619 aa		5.99	□□□□□ -1.45
EBP2	YKL172W	CAN1	P04817	590 aa		5.98	□□□□□ -1.45
EBP2	YKL172W	APL1	P27351	700 aa		5.98	□□□□□ -1.45
EBP2	YKL172W	YRO2	P38079	344 aa		5.98	□□□□□ -1.45
EBP2	YKL172W	BUD6	P41697	788 aa		5.98	□□□□□ -1.45
EBP2	YKL172W	CCM1	P48237	864 aa	Predicted RBP	5.98	□□□□□ -1.45
EBP2	YKL172W	HFM1	P51979	1187 aa		5.98	□□□□□ -1.45
EBP2	YKL172W	MTC3	P53077	123 aa		5.98	□□□□□ -1.45
EBP2	YKL172W	SNO2	P53823	222 aa		5.98	□□□□□ -1.45
EBP2	YKL172W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.98	□□□□□ -1.45	not detected
EBP2	YKL172W	YOR352W	Q08816	343 aa		5.98	□□□□□ -1.45
EBP2	YKL172W	GIC1	P38785	314 aa		5.97	□□□□□ -1.45
EBP2	YKL172W	YER158C	P40095	573 aa		5.97	□□□□□ -1.45
EBP2	YKL172W	PPM2	Q08282	695 aa		5.97	□□□□□ -1.45
EBP2	YKL172W	HBN1	Q96VH4	193 aa		5.97	□□□□□ -1.45
EBP2	YKL172W	CDC48	P25694	835 aa	Known RBP	5.96	□□□□□ -1.46
EBP2	YKL172W	DOM34	P33309	386 aa		5.96	□□□□□ -1.46
EBP2	YKL172W	PET10	P36139	283 aa		5.96	□□□□□ -1.46
EBP2	YKL172W	YAP1801	P38856	637 aa		5.96	□□□□□ -1.46
EBP2	YKL172W	MSC2	Q03455	724 aa		5.96	□□□□□ -1.46
EBP2	YKL172W	YLR125W	Q12138	136 aa		5.96	□□□□□ -1.46
EBP2	YKL172W	ABZ1	P37254	787 aa	Predicted RBP	5.95	□□□□□ -1.46
EBP2	YKL172W	ETP1	P38748	585 aa	Known RBP	5.95	□□□□□ -1.46
EBP2	YKL172W	RIB2	Q12362	591 aa	Known RBP	5.95	□□□□□ -1.46
EBP2	YKL172W	CYC1	P00044	109 aa	Predicted RBP	5.94	□□□□□ -1.46
EBP2	YKL172W	TOM70	P07213	617 aa	Known RBP	5.94	□□□□□ -1.46
EBP2	YKL172W	REC104	P33323	182 aa		5.94	□□□□□ -1.46
EBP2	YKL172W	YBR284W	P38150	797 aa		5.94	□□□□□ -1.46
EBP2	YKL172W	YBR238C	P38330	731 aa	Known RBP	5.94	□□□□□ -1.46
EBP2	YKL172W	TSL1	P38427	1098 aa	Known RBP	5.94	□□□□□ -1.46
EBP2	YKL172W	NMD2	P38798	1089 aa	Known RBP	5.94	□□□□□ -1.46
EBP2	YKL172W	NUP82	P40368	713 aa		5.94	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 108.1 ms