RNA–Protein interactions for RNA: YKL164C

PIR1, Transcript of O-glycosylated protein required for cell wall stability, yeast

Gene PIR1, Length 1,026 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIR1	YKL164C	CIT2	P08679	460 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	YER152C	P10356	443 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
PIR1	YKL164C	NFS1	P25374	497 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	RSC6	P25632	483 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	KIP1	P28742	1111 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	SRP40	P32583	406 aa	Predicted RBP	4.56	□□□□□ -1.68
PIR1	YKL164C	MRP8	P35719	219 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	NNK1	P36003	928 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	YHR020W	P38708	688 aa	Known RBP	4.56	□□□□□ -1.68
PIR1	YKL164C	HSE1	P38753	452 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	MBP1	P39678	833 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	SIP5	P40210	489 aa	Known RBP	4.56	□□□□□ -1.68
PIR1	YKL164C	YGL176C	P46945	554 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	PFD1	P46988	109 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	HNT2	P49775	206 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	ALT1	P52893	592 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	RPN4	Q03465	531 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	FMP25	Q08023	583 aa		4.56	□□□□□ -1.68
PIR1	YKL164C	CDC53	Q12018	815 aa	Known RBP	4.56	□□□□□ -1.68
PIR1	YKL164C	MMS1	Q06211	1407 aa		4.55	□□□□□ -1.68
PIR1	YKL164C	RPS4A	P0CX35	261 aa	Known RBP	4.55	□□□□□ -1.68
PIR1	YKL164C	RPS4B	P0CX36	261 aa	Known RBP	4.55	□□□□□ -1.68
PIR1	YKL164C	NAM7	P30771	971 aa	Known RBP	4.55	□□□□□ -1.68
PIR1	YKL164C	YKL091C	P33324	310 aa	Known RBP	4.55	□□□□□ -1.68
PIR1	YKL164C	YKL107W	P34251	309 aa		4.55	□□□□□ -1.68
PIR1	YKL164C	SKN7	P38889	622 aa		4.55	□□□□□ -1.68
PIR1	YKL164C	GPB2	P39717	880 aa		4.55	□□□□□ -1.68
PIR1	YKL164C	BUD6	P41697	788 aa		4.55	□□□□□ -1.68
PIR1	YKL164C	TIM54	P47045	478 aa		4.55	□□□□□ -1.68
PIR1	YKL164C	YMR187C	Q03236	431 aa		4.55	□□□□□ -1.68
PIR1	YKL164C	FPR4	Q06205	392 aa	Predicted RBP	4.55	□□□□□ -1.68
PIR1	YKL164C	GIC2	Q06648	383 aa		4.55	□□□□□ -1.68
PIR1	YKL164C	PPM2	Q08282	695 aa		4.55	□□□□□ -1.68
PIR1	YKL164C	GNT1	Q12096	491 aa		4.55	□□□□□ -1.68
PIR1	YKL164C	PHM7	Q12252	991 aa		4.55	□□□□□ -1.68
PIR1	YKL164C	RPL8B	P29453	256 aa	Known RBP	4.54	□□□□□ -1.68
PIR1	YKL164C	PGM1	P33401	570 aa	Known RBP	4.54	□□□□□ -1.68
PIR1	YKL164C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
PIR1	YKL164C	IRR1	P40541	1150 aa		4.54	□□□□□ -1.68
PIR1	YKL164C	YJL045W	P47052	634 aa		4.54	□□□□□ -1.68
PIR1	YKL164C	MCA1	Q08601	432 aa		4.54	□□□□□ -1.68
PIR1	YKL164C	YPL260W	Q08977	551 aa		4.54	□□□□□ -1.68
PIR1	YKL164C	YPR053C	Q6Q5F3	151 aa		4.54	□□□□□ -1.68
PIR1	YKL164C	GLT1	Q12680	2145 aa	Known RBP	4.54	□□□□□ -1.68
PIR1	YKL164C	HAP1	P0CE41	1502 aa		4.53	□□□□□ -1.68
PIR1	YKL164C	DBP2	P24783	546 aa	Known RBP	4.53	□□□□□ -1.68
PIR1	YKL164C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
PIR1	YKL164C	PNT1	P38969	423 aa		4.53	□□□□□ -1.68
PIR1	YKL164C	KRI1	P42846	591 aa	Known RBP	4.53	□□□□□ -1.68
PIR1	YKL164C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
PIR1	YKL164C	PUS7	Q08647	676 aa	Known RBP	4.53	□□□□□ -1.68
PIR1	YKL164C	SPO21	Q12411	609 aa		4.53	□□□□□ -1.68
PIR1	YKL164C	YSP2	Q06681	1438 aa		4.53	□□□□□ -1.68
PIR1	YKL164C	SBP1	P10080	294 aa	Known RBP	4.52	□□□□□ -1.69
PIR1	YKL164C	PBY1	P38254	753 aa		4.52	□□□□□ -1.69
PIR1	YKL164C	AKR1	P39010	764 aa		4.52	□□□□□ -1.69
PIR1	YKL164C	ICP55	P40051	511 aa		4.52	□□□□□ -1.69
PIR1	YKL164C	YFL054C	P43549	646 aa		4.52	□□□□□ -1.69
PIR1	YKL164C	TPP1	Q03796	238 aa		4.52	□□□□□ -1.69
PIR1	YKL164C	RCL1	Q08096	367 aa	Predicted RBP	4.52	□□□□□ -1.69
PIR1	YKL164C	FLC1	Q08967	793 aa		4.52	□□□□□ -1.69
PIR1	YKL164C	SRB8	P25648	1427 aa		4.52	□□□□□ -1.69
PIR1	YKL164C	IKI3	Q06706	1349 aa	Known RBP	4.51	□□□□□ -1.69
PIR1	YKL164C	YOR093C	Q12275	1648 aa		4.51	□□□□□ -1.69
PIR1	YKL164C	RPL11A	P0C0W9	174 aa	Known RBP	4.51	□□□□□ -1.69
PIR1	YKL164C	WHI3	P34761	661 aa	Known RBP	4.51	□□□□□ -1.69
PIR1	YKL164C	TAT1	P38085	619 aa		4.51	□□□□□ -1.69
PIR1	YKL164C	RSP5	P39940	809 aa	Known RBP	4.51	□□□□□ -1.69
PIR1	YKL164C	RPN3	P40016	523 aa	Known RBP	4.51	□□□□□ -1.69
PIR1	YKL164C	MXR1	P40029	184 aa		4.51	□□□□□ -1.69
PIR1	YKL164C	HRK1	Q08732	759 aa	Known RBP	4.51	□□□□□ -1.69
PIR1	YKL164C	RPL11B	Q3E757	174 aa	Predicted RBP	4.51	□□□□□ -1.69
PIR1	YKL164C	AIM44	Q99299	758 aa		4.51	□□□□□ -1.69
PIR1	YKL164C	CIT1	P00890	479 aa		4.5	□□□□□ -1.69
PIR1	YKL164C	SNF5	P18480	905 aa		4.5	□□□□□ -1.69
PIR1	YKL164C	HBS1	P32769	611 aa	Known RBP	4.5	□□□□□ -1.69
PIR1	YKL164C	YSC84	P32793	468 aa		4.5	□□□□□ -1.69
PIR1	YKL164C	YGR125W	P53273	1036 aa		4.5	□□□□□ -1.69
PIR1	YKL164C	UTP8	P53276	713 aa	Known RBP	4.5	□□□□□ -1.69
PIR1	YKL164C	RNH70	P53331	553 aa		4.5	□□□□□ -1.69
PIR1	YKL164C	YPL034W	Q03083	165 aa		4.5	□□□□□ -1.69
PIR1	YKL164C	SPP382	Q06411	708 aa	Predicted RBP	4.5	□□□□□ -1.69
PIR1	YKL164C	YVC1	Q12324	675 aa		4.5	□□□□□ -1.69
PIR1	YKL164C	GCN2	P15442	1659 aa		4.49	□□□□□ -1.69
PIR1	YKL164C	SAM35	P14693	329 aa		4.49	□□□□□ -1.69
PIR1	YKL164C	BAP2	P38084	609 aa		4.49	□□□□□ -1.69
PIR1	YKL164C	SAF1	P38352	637 aa		4.49	□□□□□ -1.69
PIR1	YKL164C	MMM1	P41800	426 aa		4.49	□□□□□ -1.69
PIR1	YKL164C	HOS3	Q02959	697 aa	Known RBP	4.49	□□□□□ -1.69
PIR1	YKL164C	UBX5	Q06682	500 aa		4.49	□□□□□ -1.69
PIR1	YKL164C	SPO75	Q07798	868 aa		4.49	□□□□□ -1.69
PIR1	YKL164C	YLR122C	Q12312	125 aa		4.49	□□□□□ -1.69
PIR1	YKL164C	YOR131C	Q12486	218 aa		4.49	□□□□□ -1.69
PIR1	YKL164C	HSP60	P19882	572 aa	Known RBP	4.48	□□□□□ -1.69
PIR1	YKL164C	TIM23	P32897	222 aa		4.48	□□□□□ -1.69
PIR1	YKL164C	SLA2	P33338	968 aa		4.48	□□□□□ -1.69
PIR1	YKL164C	YKL151C	P36059	337 aa		4.48	□□□□□ -1.69
PIR1	YKL164C	ALR2	P43553	858 aa		4.48	□□□□□ -1.69
PIR1	YKL164C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.48	□□□□□ -1.69	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms