RNA–Protein interactions for RNA: YKL058W

TOA2, Transcript of TFIIA small subunit, yeast

Gene TOA2, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TOA2	YKL058W	SPT8	P38915	602 aa		10.3	□□□□□ -0.76
TOA2	YKL058W	NET1	P47035	1189 aa		10.3	□□□□□ -0.76
TOA2	YKL058W	VID30	P53076	958 aa		10.3	□□□□□ -0.76
TOA2	YKL058W	ISA1	Q07821	250 aa	Predicted RBP	10.3	□□□□□ -0.76
TOA2	YKL058W	SRD1	P09007	221 aa		10.29	□□□□□ -0.76
TOA2	YKL058W	CLB5	P30283	435 aa		10.29	□□□□□ -0.76
TOA2	YKL058W	UBP11	P36026	717 aa		10.29	□□□□□ -0.76
TOA2	YKL058W	MCR1	P36060	302 aa	Known RBP	10.29	□□□□□ -0.76
TOA2	YKL058W	PPS1	P38148	807 aa		10.29	□□□□□ -0.76
TOA2	YKL058W	PIH1	P38768	344 aa		10.29	□□□□□ -0.76
TOA2	YKL058W	RTT107	P38850	1070 aa		10.29	□□□□□ -0.76
TOA2	YKL058W	BIM1	P40013	344 aa		10.29	□□□□□ -0.76
TOA2	YKL058W	HFM1	P51979	1187 aa		10.29	□□□□□ -0.76
TOA2	YKL058W	YAF9	P53930	226 aa		10.29	□□□□□ -0.76
TOA2	YKL058W	CUR1	Q06469	252 aa		10.29	□□□□□ -0.76
TOA2	YKL058W	NEW1	Q08972	1196 aa	Known RBP	10.29	□□□□□ -0.76
TOA2	YKL058W	PLP2	Q12017	286 aa		10.29	□□□□□ -0.76
TOA2	YKL058W	SAM1	P10659	382 aa	Known RBP	10.28	□□□□□ -0.76
TOA2	YKL058W	CLN3	P13365	580 aa		10.28	□□□□□ -0.76
TOA2	YKL058W	RPC53	P25441	422 aa		10.28	□□□□□ -0.76
TOA2	YKL058W	GPB2	P39717	880 aa		10.28	□□□□□ -0.76
TOA2	YKL058W	VFA1	P40080	203 aa		10.28	□□□□□ -0.76
TOA2	YKL058W	YFL034W	P43564	1073 aa		10.28	□□□□□ -0.76
TOA2	YKL058W	HOS3	Q02959	697 aa	Known RBP	10.28	□□□□□ -0.76
TOA2	YKL058W	VPS38	Q05919	439 aa		10.28	□□□□□ -0.76
TOA2	YKL058W	YDL057W	Q07379	328 aa		10.28	□□□□□ -0.76
TOA2	YKL058W	ATG9	Q12142	997 aa		10.28	□□□□□ -0.76
TOA2	YKL058W	MED1	Q12321	566 aa		10.28	□□□□□ -0.76
TOA2	YKL058W	PCK1	P10963	549 aa		10.27	□□□□□ -0.77
TOA2	YKL058W	CDC60	P26637	1090 aa	Known RBP	10.27	□□□□□ -0.77
TOA2	YKL058W	PCH2	P38126	564 aa		10.27	□□□□□ -0.77
TOA2	YKL058W	PNT1	P38969	423 aa		10.27	□□□□□ -0.77
TOA2	YKL058W	CCC2	P38995	1004 aa		10.27	□□□□□ -0.77
TOA2	YKL058W	YIL089W	P40500	205 aa		10.27	□□□□□ -0.77
TOA2	YKL058W	FIS1	P40515	155 aa		10.27	□□□□□ -0.77
TOA2	YKL058W	NBP1	P52919	319 aa	Predicted RBP	10.27	□□□□□ -0.77
TOA2	YKL058W	DIP5	P53388	608 aa		10.27	□□□□□ -0.77
TOA2	YKL058W	ERG5	P54781	538 aa		10.27	□□□□□ -0.77
TOA2	YKL058W	PEX29	Q03370	554 aa		10.27	□□□□□ -0.77
TOA2	YKL058W	YLR287C	Q05881	355 aa		10.27	□□□□□ -0.77
TOA2	YKL058W	YPL216W	Q08964	1102 aa		10.27	□□□□□ -0.77
TOA2	YKL058W	YPL277C	Q08989	487 aa		10.27	□□□□□ -0.77
TOA2	YKL058W	PET111	P08468	800 aa		10.26	□□□□□ -0.77
TOA2	YKL058W	SUP45	P12385	437 aa	Known RBP	10.26	□□□□□ -0.77
TOA2	YKL058W	TCP1	P12612	559 aa	Known RBP	10.26	□□□□□ -0.77
TOA2	YKL058W	SEC23	P15303	768 aa	Known RBP	10.26	□□□□□ -0.77
TOA2	YKL058W	APL1	P27351	700 aa		10.26	□□□□□ -0.77
TOA2	YKL058W	UTR4	P32626	227 aa		10.26	□□□□□ -0.77
TOA2	YKL058W	UBP5	P39944	805 aa		10.26	□□□□□ -0.77
TOA2	YKL058W	CEP3	P40969	608 aa		10.26	□□□□□ -0.77
TOA2	YKL058W	TOS3	P43637	560 aa		10.26	□□□□□ -0.77
TOA2	YKL058W	DUS3	Q06053	668 aa	Known RBP	10.26	□□□□□ -0.77
TOA2	YKL058W	SPO75	Q07798	868 aa		10.26	□□□□□ -0.77
TOA2	YKL058W	CDC19	P00549	500 aa	Known RBP	10.25	□□□□□ -0.77
TOA2	YKL058W	SSB1	P11484	613 aa	Known RBP	10.25	□□□□□ -0.77
TOA2	YKL058W	VMA2	P16140	517 aa	Known RBP	10.25	□□□□□ -0.77
TOA2	YKL058W	MCD4	P36051	919 aa		10.25	□□□□□ -0.77
TOA2	YKL058W	SSB2	P40150	613 aa	Known RBP	10.25	□□□□□ -0.77
TOA2	YKL058W	PEX21	P50091	288 aa		10.25	□□□□□ -0.77
TOA2	YKL058W	YGR125W	P53273	1036 aa		10.25	□□□□□ -0.77
TOA2	YKL058W	ZPR1	P53303	486 aa	Known RBP	10.25	□□□□□ -0.77
TOA2	YKL058W	CWC2	Q12046	339 aa	Predicted RBP	10.25	□□□□□ -0.77
TOA2	YKL058W	RRP6	Q12149	733 aa	Known RBP	10.25	□□□□□ -0.77
TOA2	YKL058W	TRK2	P28584	889 aa		10.24	□□□□□ -0.77
TOA2	YKL058W	MRF1	P30775	413 aa	Predicted RBP	10.24	□□□□□ -0.77
TOA2	YKL058W	RPC25	P35718	212 aa		10.24	□□□□□ -0.77
TOA2	YKL058W	PGM2	P37012	569 aa	Known RBP	10.24	□□□□□ -0.77
TOA2	YKL058W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	10.24	□□□□□ -0.77	not detected
TOA2	YKL058W	SHQ1	P40486	507 aa	Predicted RBP	10.24	□□□□□ -0.77
TOA2	YKL058W	CFT2	Q12102	859 aa	Predicted RBP	10.24	□□□□□ -0.77
TOA2	YKL058W	NOP58	Q12499	511 aa	Known RBP	10.24	□□□□□ -0.77
TOA2	YKL058W	PKC1	P24583	1151 aa		10.23	□□□□□ -0.77
TOA2	YKL058W	SEC8	P32855	1065 aa		10.23	□□□□□ -0.77
TOA2	YKL058W	SHP1	P34223	423 aa		10.23	□□□□□ -0.77
TOA2	YKL058W	RPN3	P40016	523 aa	Known RBP	10.23	□□□□□ -0.77
TOA2	YKL058W	HMF1	P40037	129 aa	Known RBP	10.23	□□□□□ -0.77
TOA2	YKL058W	ULP2	P40537	1034 aa	Predicted RBP	10.23	□□□□□ -0.77
TOA2	YKL058W	YAP5	P40574	245 aa		10.23	□□□□□ -0.77
TOA2	YKL058W	FIG4	P42837	879 aa		10.23	□□□□□ -0.77
TOA2	YKL058W	OSW7	P43611	510 aa		10.23	□□□□□ -0.77
TOA2	YKL058W	CAF130	P53280	1122 aa	Predicted RBP	10.23	□□□□□ -0.77
TOA2	YKL058W	UTP5	Q04177	643 aa	Known RBP	10.23	□□□□□ -0.77
TOA2	YKL058W	CRD1	Q07560	283 aa		10.23	□□□□□ -0.77
TOA2	YKL058W	RKM4	Q12504	494 aa		10.23	□□□□□ -0.77
TOA2	YKL058W	PPR1	P07272	904 aa	Predicted RBP	10.22	□□□□□ -0.77
TOA2	YKL058W	PHO8	P11491	566 aa		10.22	□□□□□ -0.77
TOA2	YKL058W	SPO12	P17123	173 aa		10.22	□□□□□ -0.77
TOA2	YKL058W	DAL7	P21826	554 aa		10.22	□□□□□ -0.77
TOA2	YKL058W	TKL1	P23254	680 aa	Known RBP	10.22	□□□□□ -0.77
TOA2	YKL058W	STE11	P23561	717 aa		10.22	□□□□□ -0.77
TOA2	YKL058W	UBP13	P38187	747 aa		10.22	□□□□□ -0.77
TOA2	YKL058W	MCX1	P38323	520 aa	Predicted RBP	10.22	□□□□□ -0.77
TOA2	YKL058W	VPS29	P38759	282 aa		10.22	□□□□□ -0.77
TOA2	YKL058W	CAJ1	P39101	391 aa		10.22	□□□□□ -0.77
TOA2	YKL058W	ATG3	P40344	310 aa		10.22	□□□□□ -0.77
TOA2	YKL058W	SDS3	P40505	327 aa		10.22	□□□□□ -0.77
TOA2	YKL058W	CTR1	P49573	406 aa		10.22	□□□□□ -0.77
TOA2	YKL058W	HUL5	P53119	910 aa		10.22	□□□□□ -0.77
TOA2	YKL058W	ARK1	P53974	638 aa		10.22	□□□□□ -0.77
TOA2	YKL058W	UME1	Q03010	460 aa		10.22	□□□□□ -0.77

Retrieved 100 of 5,963 RNA–protein pairs in 70.7 ms