RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFA1	YKL028W	PIP2	P52960	996 aa		5.22	□□□□□ -1.57
TFA1	YKL028W	PEX14	P53112	341 aa		5.22	□□□□□ -1.57
TFA1	YKL028W	MON1	P53129	644 aa		5.22	□□□□□ -1.57
TFA1	YKL028W	GUP1	P53154	560 aa		5.22	□□□□□ -1.57
TFA1	YKL028W	NCE103	P53615	221 aa		5.22	□□□□□ -1.57
TFA1	YKL028W	BIO5	P53744	561 aa	Known RBP	5.22	□□□□□ -1.57
TFA1	YKL028W	YNL034W	P53963	612 aa		5.22	□□□□□ -1.57
TFA1	YKL028W	YNL018C	P53976	612 aa		5.22	□□□□□ -1.57
TFA1	YKL028W	GIC2	Q06648	383 aa		5.22	□□□□□ -1.57
TFA1	YKL028W	YDL124W	Q07551	312 aa	Known RBP	5.22	□□□□□ -1.57
TFA1	YKL028W	RNQ1	P25367	405 aa		5.21	□□□□□ -1.58
TFA1	YKL028W	LYP1	P32487	611 aa		5.21	□□□□□ -1.58
TFA1	YKL028W	ALR2	P43553	858 aa		5.21	□□□□□ -1.58
TFA1	YKL028W	NUT1	P53114	1132 aa		5.21	□□□□□ -1.58
TFA1	YKL028W	SDH1	Q00711	640 aa		5.21	□□□□□ -1.58
TFA1	YKL028W	YLR001C	Q07895	862 aa		5.21	□□□□□ -1.58
TFA1	YKL028W	TRE2	Q08693	809 aa		5.21	□□□□□ -1.58
TFA1	YKL028W	HSC82	P15108	705 aa	Known RBP	5.2	□□□□□ -1.58
TFA1	YKL028W	PRP9	P19736	530 aa	Known RBP	5.2	□□□□□ -1.58
TFA1	YKL028W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
TFA1	YKL028W	SSH4	P32343	579 aa		5.2	□□□□□ -1.58
TFA1	YKL028W	PLC1	P32383	869 aa		5.2	□□□□□ -1.58
TFA1	YKL028W	MRS6	P32864	603 aa	Known RBP	5.2	□□□□□ -1.58
TFA1	YKL028W	PTH2	P34222	208 aa		5.2	□□□□□ -1.58
TFA1	YKL028W	BLI1	P35727	113 aa		5.2	□□□□□ -1.58
TFA1	YKL028W	MAE1	P36013	669 aa	Known RBP	5.2	□□□□□ -1.58
TFA1	YKL028W	SDA1	P53313	767 aa	Known RBP	5.2	□□□□□ -1.58
TFA1	YKL028W	CTR9	P89105	1077 aa		5.2	□□□□□ -1.58
TFA1	YKL028W	MET14	Q02196	202 aa		5.2	□□□□□ -1.58
TFA1	YKL028W	ELG1	Q12050	791 aa		5.2	□□□□□ -1.58
TFA1	YKL028W	TAF13	P11747	167 aa		5.19	□□□□□ -1.58
TFA1	YKL028W	MEF1	P25039	761 aa		5.19	□□□□□ -1.58
TFA1	YKL028W	RVS167	P39743	482 aa	Known RBP	5.19	□□□□□ -1.58
TFA1	YKL028W	MSH6	Q03834	1242 aa		5.19	□□□□□ -1.58
TFA1	YKL028W	YLR225C	Q05948	407 aa	Known RBP	5.19	□□□□□ -1.58
TFA1	YKL028W	MDM12	Q92328	271 aa		5.19	□□□□□ -1.58
TFA1	YKL028W	COB	P00163	385 aa		5.18	□□□□□ -1.58
TFA1	YKL028W	SEC23	P15303	768 aa	Known RBP	5.18	□□□□□ -1.58
TFA1	YKL028W	ERS1	P17261	260 aa		5.18	□□□□□ -1.58
TFA1	YKL028W	SQT1	P35184	431 aa		5.18	□□□□□ -1.58
TFA1	YKL028W	RER2	P35196	286 aa		5.18	□□□□□ -1.58
TFA1	YKL028W	BAP2	P38084	609 aa		5.18	□□□□□ -1.58
TFA1	YKL028W	YBR287W	P38355	427 aa		5.18	□□□□□ -1.58
TFA1	YKL028W	AIM46	P38885	310 aa		5.18	□□□□□ -1.58
TFA1	YKL028W	HXT13	P39924	564 aa		5.18	□□□□□ -1.58
TFA1	YKL028W	HXT17	P53631	564 aa		5.18	□□□□□ -1.58
TFA1	YKL028W	HXT15	P54854	567 aa		5.18	□□□□□ -1.58
TFA1	YKL028W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
TFA1	YKL028W	SPO71	Q03868	1245 aa		5.18	□□□□□ -1.58
TFA1	YKL028W	HFD1	Q04458	532 aa		5.18	□□□□□ -1.58
TFA1	YKL028W	PSR2	Q07949	397 aa		5.18	□□□□□ -1.58
TFA1	YKL028W	GAL1	P04385	528 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	PTP2	P29461	750 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	MKK2	P32491	506 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	DUR3	P33413	735 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	LRG1	P35688	1017 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	JNM1	P36224	373 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	MAL31	P38156	614 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	ECM2	P38241	364 aa	Known RBP	5.17	□□□□□ -1.58
TFA1	YKL028W	YAP1801	P38856	637 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	MGS1	P40151	587 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	SEC26	P41810	973 aa	Known RBP	5.17	□□□□□ -1.58
TFA1	YKL028W	MTR4	P47047	1073 aa	Known RBP	5.17	□□□□□ -1.58
TFA1	YKL028W	RSM26	P47141	266 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	ENT3	P47160	408 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	YGL140C	P53120	1219 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	HDA2	Q06629	674 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	RRP6	Q12149	733 aa	Known RBP	5.17	□□□□□ -1.58
TFA1	YKL028W	CMR1	Q12510	522 aa	Known RBP	5.17	□□□□□ -1.58
TFA1	YKL028W	RTP1	Q12751	981 aa		5.17	□□□□□ -1.58
TFA1	YKL028W	GCD1	P09032	578 aa	Predicted RBP	5.16	□□□□□ -1.58
TFA1	YKL028W	PRP5	P21372	849 aa	Predicted RBP	5.16	□□□□□ -1.58
TFA1	YKL028W	TFC4	P33339	1025 aa		5.16	□□□□□ -1.58
TFA1	YKL028W	SEG2	P34250	1132 aa		5.16	□□□□□ -1.58
TFA1	YKL028W	TYS1	P36421	394 aa	Known RBP	5.16	□□□□□ -1.58
TFA1	YKL028W	EXO84	P38261	753 aa		5.16	□□□□□ -1.58
TFA1	YKL028W	PEX28	P38848	579 aa		5.16	□□□□□ -1.58
TFA1	YKL028W	DSS1	P39112	969 aa		5.16	□□□□□ -1.58
TFA1	YKL028W	UBP5	P39944	805 aa		5.16	□□□□□ -1.58
TFA1	YKL028W	NEO1	P40527	1151 aa		5.16	□□□□□ -1.58
TFA1	YKL028W	SAP155	P43612	1002 aa		5.16	□□□□□ -1.58
TFA1	YKL028W	SIW14	P53965	281 aa		5.16	□□□□□ -1.58
TFA1	YKL028W	SNU66	Q12420	587 aa	Predicted RBP	5.16	□□□□□ -1.58
TFA1	YKL028W	FOB1	O13329	566 aa		5.15	□□□□□ -1.58
TFA1	YKL028W	INH1	P01097	85 aa		5.15	□□□□□ -1.58
TFA1	YKL028W	HSP78	P33416	811 aa		5.15	□□□□□ -1.58
TFA1	YKL028W	POL12	P38121	705 aa	Predicted RBP	5.15	□□□□□ -1.58
TFA1	YKL028W	RIM4	P38741	713 aa		5.15	□□□□□ -1.58
TFA1	YKL028W	HSE1	P38753	452 aa		5.15	□□□□□ -1.58
TFA1	YKL028W	MTQ2	Q03920	221 aa	Predicted RBP	5.15	□□□□□ -1.58
TFA1	YKL028W	PMT7	Q06644	662 aa		5.15	□□□□□ -1.58
TFA1	YKL028W	HBN1	Q96VH4	193 aa		5.15	□□□□□ -1.58
TFA1	YKL028W	GSY1	P23337	708 aa		5.14	□□□□□ -1.59
TFA1	YKL028W	GFD2	P25370	566 aa	Known RBP	5.14	□□□□□ -1.59
TFA1	YKL028W	HAS1	Q03532	505 aa	Known RBP	5.14	□□□□□ -1.59
TFA1	YKL028W	TOM70	P07213	617 aa	Known RBP	5.14	□□□□□ -1.59
TFA1	YKL028W	HEM13	P11353	328 aa	Known RBP	5.14	□□□□□ -1.59
TFA1	YKL028W	INO1	P11986	533 aa		5.14	□□□□□ -1.59
TFA1	YKL028W	OPI1	P21957	404 aa		5.14	□□□□□ -1.59
TFA1	YKL028W	HBS1	P32769	611 aa	Known RBP	5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 119.5 ms