RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W QRI1P43123 477 aaKnown RBP4.37□□□□□ -1.71
PEP8YJL053W TIM44Q01852 431 aa4.37□□□□□ -1.71
PEP8YJL053W YOL073CQ08232 322 aa4.37□□□□□ -1.71
PEP8YJL053W SSA1P10591 642 aaKnown RBP4.36□□□□□ -1.71
PEP8YJL053W EFT1P32324 842 aaKnown RBP4.36□□□□□ -1.71
PEP8YJL053W CHA4P43634 648 aa4.36□□□□□ -1.71
PEP8YJL053W SIW14P53965 281 aa4.36□□□□□ -1.71
PEP8YJL053W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
PEP8YJL053W TMN2Q04562 672 aa4.36□□□□□ -1.71
PEP8YJL053W KCS1Q12494 1050 aa4.36□□□□□ -1.71
PEP8YJL053W CNN1P43618 361 aa4.35□□□□□ -1.71
PEP8YJL053W HXK1P04806 485 aaKnown RBP4.34□□□□□ -1.71
PEP8YJL053W ENT3P47160 408 aa4.34□□□□□ -1.71
PEP8YJL053W STB4P50104 949 aa4.34□□□□□ -1.71
PEP8YJL053W YMR206WQ03695 313 aa4.34□□□□□ -1.71
PEP8YJL053W YLR040CQ07988 224 aa4.34□□□□□ -1.71
PEP8YJL053W ENB1Q08299 606 aa4.34□□□□□ -1.71
PEP8YJL053W BI4P03879 638 aa4.33□□□□□ -1.72
PEP8YJL053W THS1P04801 734 aaKnown RBP4.33□□□□□ -1.72
PEP8YJL053W SEC8P32855 1065 aa4.33□□□□□ -1.72
PEP8YJL053W MXR1P40029 184 aa4.33□□□□□ -1.72
PEP8YJL053W YER158CP40095 573 aa4.33□□□□□ -1.72
PEP8YJL053W OMS1Q06668 471 aa4.33□□□□□ -1.72
PEP8YJL053W ACM1Q08981 209 aa4.33□□□□□ -1.72
PEP8YJL053W MCD1Q12158 566 aa4.33□□□□□ -1.72
PEP8YJL053W MET4P32389 672 aa4.32□□□□□ -1.72
PEP8YJL053W MRPS18P42847 217 aa4.32□□□□□ -1.72
PEP8YJL053W THI12P42883 340 aa4.32□□□□□ -1.72
PEP8YJL053W THI5P43534 340 aa4.32□□□□□ -1.72
PEP8YJL053W THI11P47183 340 aa4.32□□□□□ -1.72
PEP8YJL053W HFM1P51979 1187 aa4.32□□□□□ -1.72
PEP8YJL053W THI13Q07748 340 aa4.32□□□□□ -1.72
PEP8YJL053W IRC10Q08118 586 aa4.32□□□□□ -1.72
PEP8YJL053W ACF2Q12168 779 aa4.32□□□□□ -1.72
PEP8YJL053W DBP5P20449 482 aaKnown RBP4.31□□□□□ -1.72
PEP8YJL053W CAD1P24813 409 aaKnown RBP4.31□□□□□ -1.72
PEP8YJL053W RPT1P33299 467 aaKnown RBP4.31□□□□□ -1.72
PEP8YJL053W GEM1P39722 662 aa4.31□□□□□ -1.72
PEP8YJL053W NPC2Q12408 173 aa4.31□□□□□ -1.72
PEP8YJL053W RPL11AP0C0W9 174 aaKnown RBP4.3□□□□□ -1.72
PEP8YJL053W KTR4P38131 464 aa4.3□□□□□ -1.72
PEP8YJL053W MCM7P38132 845 aa4.3□□□□□ -1.72
PEP8YJL053W PSP2P50109 593 aaKnown RBP4.3□□□□□ -1.72
PEP8YJL053W MRL1Q06815 381 aa4.3□□□□□ -1.72
PEP8YJL053W OSW2Q12202 724 aa4.3□□□□□ -1.72
PEP8YJL053W RPL11BQ3E757 174 aaPredicted RBP4.3□□□□□ -1.72
PEP8YJL053W YGR012WP53206 393 aa4.29□□□□□ -1.72
PEP8YJL053W GEF1P37020 779 aa4.28□□□□□ -1.72
PEP8YJL053W CCC2P38995 1004 aa4.28□□□□□ -1.72
PEP8YJL053W XYL2Q07993 356 aa4.28□□□□□ -1.72
PEP8YJL053W GNT1Q12096 491 aa4.28□□□□□ -1.72
PEP8YJL053W ERG4P25340 473 aa4.27□□□□□ -1.73
PEP8YJL053W MPH1P40562 993 aa4.27□□□□□ -1.73
PEP8YJL053W NDJ1Q12366 352 aa4.27□□□□□ -1.73
PEP8YJL053W SPE1P08432 466 aa4.26□□□□□ -1.73
PEP8YJL053W KAR4P25583 335 aa4.26□□□□□ -1.73
PEP8YJL053W PEX2P32800 271 aa4.26□□□□□ -1.73
PEP8YJL053W SPC42P36094 363 aa4.26□□□□□ -1.73
PEP8YJL053W PPX1P38698 397 aa4.26□□□□□ -1.73
PEP8YJL053W SPP382Q06411 708 aaPredicted RBP4.26□□□□□ -1.73
PEP8YJL053W LAS17Q12446 633 aa4.26□□□□□ -1.73
PEP8YJL053W SLA2P33338 968 aa4.25□□□□□ -1.73
PEP8YJL053W MTH1P35198 433 aa4.25□□□□□ -1.73
PEP8YJL053W HXT13P39924 564 aa4.25□□□□□ -1.73
PEP8YJL053W GND2P53319 492 aa4.25□□□□□ -1.73
PEP8YJL053W HXT17P53631 564 aa4.25□□□□□ -1.73
PEP8YJL053W HXT15P54854 567 aa4.25□□□□□ -1.73
PEP8YJL053W RNT1Q02555 471 aa4.25□□□□□ -1.73
PEP8YJL053W DBP2P24783 546 aaKnown RBP4.24□□□□□ -1.73
PEP8YJL053W SRP101P32916 621 aa4.24□□□□□ -1.73
PEP8YJL053W YAP1801P38856 637 aa4.24□□□□□ -1.73
PEP8YJL053W GUP2Q08929 609 aa4.24□□□□□ -1.73
PEP8YJL053W ATG19P35193 415 aa4.23□□□□□ -1.73
PEP8YJL053W NCS6P53088 359 aa4.23□□□□□ -1.73
PEP8YJL053W YGR122WP53272 402 aa4.23□□□□□ -1.73
PEP8YJL053W AFT2Q08957 416 aa4.23□□□□□ -1.73
PEP8YJL053W HSF1P10961 833 aa4.22□□□□□ -1.73
PEP8YJL053W CDA1Q06702 301 aa4.22□□□□□ -1.73
PEP8YJL053W RAD27P26793 382 aa4.21□□□□□ -1.74
PEP8YJL053W BUL1P48524 976 aa4.21□□□□□ -1.74
PEP8YJL053W MUK1Q02866 612 aa4.21□□□□□ -1.74
PEP8YJL053W GCR1P07261 785 aa4.2□□□□□ -1.74
PEP8YJL053W TRP4P07285 380 aaPredicted RBP4.2□□□□□ -1.74
PEP8YJL053W URM1P40554 99 aaPredicted RBP4.2□□□□□ -1.74
PEP8YJL053W TIF35Q04067 274 aaKnown RBP4.2□□□□□ -1.74
PEP8YJL053W HBT1Q07653 1046 aaKnown RBP4.2□□□□□ -1.74
PEP8YJL053W MSC6Q08818 692 aaKnown RBP4.2□□□□□ -1.74
PEP8YJL053W PPR1P07272 904 aaPredicted RBP4.19□□□□□ -1.74
PEP8YJL053W RAD2P07276 1031 aa4.19□□□□□ -1.74
PEP8YJL053W PNT1P38969 423 aa4.19□□□□□ -1.74
PEP8YJL053W STM1P39015 273 aaKnown RBP4.19□□□□□ -1.74
PEP8YJL053W GNP1P48813 663 aa4.19□□□□□ -1.74
PEP8YJL053W MTC3P53077 123 aa4.19□□□□□ -1.74
PEP8YJL053W HOF1Q05080 669 aa4.19□□□□□ -1.74
PEP8YJL053W YAP7Q08182 245 aa4.19□□□□□ -1.74
PEP8YJL053W WHI5Q12416 295 aa4.19□□□□□ -1.74
PEP8YJL053W ALG7P07286 448 aa4.18□□□□□ -1.74
PEP8YJL053W ECM21P38167 1117 aaKnown RBP4.18□□□□□ -1.74
PEP8YJL053W RER2P35196 286 aa4.17□□□□□ -1.74
PEP8YJL053W WHI4Q07655 649 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms