RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C MLF3P32047 452 aa2.34□□□□□ -2.03
RTT101YJL047C PYC2P32327 1180 aaKnown RBP2.34□□□□□ -2.03
RTT101YJL047C HEM12P32347 362 aaPredicted RBP2.34□□□□□ -2.03
RTT101YJL047C IRE1P32361 1115 aa2.34□□□□□ -2.03
RTT101YJL047C FBP26P32604 452 aa2.34□□□□□ -2.03
RTT101YJL047C VMA8P32610 256 aaKnown RBP2.34□□□□□ -2.03
RTT101YJL047C SPC29P33419 253 aa2.34□□□□□ -2.03
RTT101YJL047C RRN3P36070 627 aa2.34□□□□□ -2.03
RTT101YJL047C ERT1P38140 529 aa2.34□□□□□ -2.03
RTT101YJL047C SAH1P39954 449 aaKnown RBP2.34□□□□□ -2.03
RTT101YJL047C FIR1P40020 876 aa2.34□□□□□ -2.03
RTT101YJL047C QRI7P43122 407 aa2.34□□□□□ -2.03
RTT101YJL047C GRX3Q03835 250 aa2.34□□□□□ -2.03
RTT101YJL047C TIF35Q04067 274 aaKnown RBP2.34□□□□□ -2.03
RTT101YJL047C SPN1Q06505 410 aaPredicted RBP2.34□□□□□ -2.03
RTT101YJL047C PRT1P06103 763 aaKnown RBP2.34□□□□□ -2.04
RTT101YJL047C MSM1P22438 575 aa2.34□□□□□ -2.04
RTT101YJL047C GSY1P23337 708 aa2.34□□□□□ -2.04
RTT101YJL047C DPH2P32461 534 aa2.34□□□□□ -2.04
RTT101YJL047C VPH1P32563 840 aaKnown RBP2.34□□□□□ -2.04
RTT101YJL047C ANP1P32629 500 aa2.34□□□□□ -2.04
RTT101YJL047C MKS1P34072 584 aa2.34□□□□□ -2.04
RTT101YJL047C RVS167P39743 482 aaKnown RBP2.34□□□□□ -2.04
RTT101YJL047C TMA108P40462 946 aa2.34□□□□□ -2.04
RTT101YJL047C SAP155P43612 1002 aa2.34□□□□□ -2.04
RTT101YJL047C YGL176CP46945 554 aa2.34□□□□□ -2.04
RTT101YJL047C CAF120P53836 1060 aa2.34□□□□□ -2.04
RTT101YJL047C PEX13P80667 386 aa2.34□□□□□ -2.04
RTT101YJL047C ERO1Q03103 563 aa2.34□□□□□ -2.04
RTT101YJL047C EIS1Q05050 843 aaKnown RBP2.34□□□□□ -2.04
RTT101YJL047C EMG1Q06287 252 aaKnown RBP2.34□□□□□ -2.04
RTT101YJL047C IMH1Q06704 911 aaKnown RBP2.34□□□□□ -2.04
RTT101YJL047C SPS1P08458 490 aa2.33□□□□□ -2.04
RTT101YJL047C BRF1P29056 596 aa2.33□□□□□ -2.04
RTT101YJL047C MUD2P36084 527 aaKnown RBP2.33□□□□□ -2.04
RTT101YJL047C RDH54P38086 958 aa2.33□□□□□ -2.04
RTT101YJL047C BCD1P38772 366 aa2.33□□□□□ -2.04
RTT101YJL047C IML2P47031 731 aa2.33□□□□□ -2.04
RTT101YJL047C UPF3P48412 387 aaKnown RBP2.33□□□□□ -2.04
RTT101YJL047C HOS2P53096 452 aaPredicted RBP2.33□□□□□ -2.04
RTT101YJL047C YAP1802P53309 568 aa2.33□□□□□ -2.04
RTT101YJL047C MOT3P54785 490 aaKnown RBP2.33□□□□□ -2.04
RTT101YJL047C SRP1Q02821 542 aaKnown RBP2.33□□□□□ -2.04
RTT101YJL047C SYH1Q02875 849 aaKnown RBP2.33□□□□□ -2.04
RTT101YJL047C PKH1Q03407 766 aa2.33□□□□□ -2.04
RTT101YJL047C SPC19Q03954 165 aa2.33□□□□□ -2.04
RTT101YJL047C YDR286CQ05530 114 aa2.33□□□□□ -2.04
RTT101YJL047C ECM38Q05902 660 aaPredicted RBP2.33□□□□□ -2.04
RTT101YJL047C AOS1Q06624 347 aa2.33□□□□□ -2.04
RTT101YJL047C YTM1Q12024 460 aaPredicted RBP2.33□□□□□ -2.04
RTT101YJL047C CLF1Q12309 687 aaPredicted RBP2.33□□□□□ -2.04
RTT101YJL047C YPR071WQ12346 211 aa2.33□□□□□ -2.04
RTT101YJL047C BI4P03879 638 aa2.33□□□□□ -2.04
RTT101YJL047C PHR1P05066 565 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
RTT101YJL047C DED1P06634 604 aaKnown RBP2.33□□□□□ -2.04
RTT101YJL047C YER152CP10356 443 aa2.33□□□□□ -2.04
RTT101YJL047C STE6P12866 1290 aa2.33□□□□□ -2.04
RTT101YJL047C GFA1P14742 717 aaKnown RBP2.33□□□□□ -2.04
RTT101YJL047C IDI1P15496 288 aa2.33□□□□□ -2.04
RTT101YJL047C MSH3P25336 1018 aa2.33□□□□□ -2.04
RTT101YJL047C SER1P33330 395 aaKnown RBP2.33□□□□□ -2.04
RTT101YJL047C YKL107WP34251 309 aa2.33□□□□□ -2.04
RTT101YJL047C DHR2P36009 735 aaPredicted RBP2.33□□□□□ -2.04
RTT101YJL047C PET10P36139 283 aa2.33□□□□□ -2.04
RTT101YJL047C RXT2P38255 430 aa2.33□□□□□ -2.04
RTT101YJL047C BIT2P38346 545 aa2.33□□□□□ -2.04
RTT101YJL047C RIM11P38615 370 aa2.33□□□□□ -2.04
RTT101YJL047C PCM1P38628 557 aaKnown RBP2.33□□□□□ -2.04
RTT101YJL047C CCT3P39077 534 aaKnown RBP2.33□□□□□ -2.04
RTT101YJL047C CAJ1P39101 391 aa2.33□□□□□ -2.04
RTT101YJL047C AIM14P53109 570 aa2.33□□□□□ -2.04
RTT101YJL047C CEG1Q01159 459 aaPredicted RBP2.33□□□□□ -2.04
RTT101YJL047C RAT1Q02792 1006 aaKnown RBP2.33□□□□□ -2.04
RTT101YJL047C NSE5Q03718 556 aa2.33□□□□□ -2.04
RTT101YJL047C ARA2Q04212 335 aa2.33□□□□□ -2.04
RTT101YJL047C UTP4Q06679 776 aaKnown RBP2.33□□□□□ -2.04
RTT101YJL047C DPH6Q12429 685 aa2.33□□□□□ -2.04
RTT101YJL047C RKM4Q12504 494 aa2.33□□□□□ -2.04
RTT101YJL047C RPS31P05759 152 aaKnown RBP2.32□□□□□ -2.04
RTT101YJL047C HMG1P12683 1054 aa2.32□□□□□ -2.04
RTT101YJL047C PFK1P16861 987 aaKnown RBP2.32□□□□□ -2.04
RTT101YJL047C SPO16P17122 198 aa2.32□□□□□ -2.04
RTT101YJL047C AAC3P18238 307 aa2.32□□□□□ -2.04
RTT101YJL047C SEC18P18759 758 aaKnown RBP2.32□□□□□ -2.04
RTT101YJL047C NOP4P37838 685 aaKnown RBP2.32□□□□□ -2.04
RTT101YJL047C AIM46P38885 310 aa2.32□□□□□ -2.04
RTT101YJL047C CKB2P38930 258 aa2.32□□□□□ -2.04
RTT101YJL047C SIP5P40210 489 aaKnown RBP2.32□□□□□ -2.04
RTT101YJL047C CNN1P43618 361 aa2.32□□□□□ -2.04
RTT101YJL047C ALG2P43636 503 aa2.32□□□□□ -2.04
RTT101YJL047C SGM1P47166 707 aa2.32□□□□□ -2.04
RTT101YJL047C TIM10P87108 93 aa2.32□□□□□ -2.04
RTT101YJL047C TLG1Q03322 224 aa2.32□□□□□ -2.04
RTT101YJL047C VTI1Q04338 217 aa2.32□□□□□ -2.04
RTT101YJL047C DFG5Q05031 458 aa2.32□□□□□ -2.04
RTT101YJL047C YDR338CQ05497 695 aa2.32□□□□□ -2.04
RTT101YJL047C OPY2Q06810 360 aa2.32□□□□□ -2.04
RTT101YJL047C GUD1Q07729 489 aa2.32□□□□□ -2.04
RTT101YJL047C RMP1Q12530 201 aa2.32□□□□□ -2.04
RTT101YJL047C RAS1P01119 309 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 79.1 ms