RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W SRM1P21827 482 aa6.48□□□□□ -1.37
SEC28YIL076W NAP1P25293 417 aaKnown RBP6.48□□□□□ -1.37
SEC28YIL076W ABD1P32783 436 aaPredicted RBP6.48□□□□□ -1.37
SEC28YIL076W FLR1P38124 548 aa6.48□□□□□ -1.37
SEC28YIL076W MEF2P39677 819 aa6.48□□□□□ -1.37
SEC28YIL076W GEM1P39722 662 aa6.48□□□□□ -1.37
SEC28YIL076W TAF1P46677 1066 aa6.48□□□□□ -1.37
SEC28YIL076W GCN5Q03330 439 aa6.48□□□□□ -1.37
SEC28YIL076W PLB2Q03674 706 aa6.48□□□□□ -1.37
SEC28YIL076W YKL222CP35995 705 aa6.47□□□□□ -1.37
SEC28YIL076W SPT20P50875 604 aa6.47□□□□□ -1.37
SEC28YIL076W SNU71P53207 620 aaKnown RBP6.47□□□□□ -1.37
SEC28YIL076W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
SEC28YIL076W FAL1Q12099 399 aaKnown RBP6.47□□□□□ -1.37
SEC28YIL076W YCR015CP25616 317 aa6.46□□□□□ -1.38
SEC28YIL076W THS1P04801 734 aaKnown RBP6.45□□□□□ -1.38
SEC28YIL076W GIP4P39732 760 aa6.45□□□□□ -1.38
SEC28YIL076W RRT14P40470 206 aa6.45□□□□□ -1.38
SEC28YIL076W SIZ1Q04195 904 aa6.45□□□□□ -1.38
SEC28YIL076W HFM1P51979 1187 aa6.44□□□□□ -1.38
SEC28YIL076W PIN4P34217 668 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
SEC28YIL076W DUS4Q06063 367 aa6.43□□□□□ -1.38
SEC28YIL076W PRI2P20457 528 aa6.42□□□□□ -1.38
SEC28YIL076W PRE10P21242 288 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
SEC28YIL076W SNF7P39929 240 aaKnown RBP6.42□□□□□ -1.38
SEC28YIL076W MSC2Q03455 724 aa6.42□□□□□ -1.38
SEC28YIL076W YLR358CO13565 187 aa6.41□□□□□ -1.38
SEC28YIL076W AGP1P25376 633 aa6.41□□□□□ -1.38
SEC28YIL076W SBA1P28707 216 aaKnown RBP6.41□□□□□ -1.38
SEC28YIL076W YKL069WP36088 180 aa6.41□□□□□ -1.38
SEC28YIL076W MTC3P53077 123 aa6.41□□□□□ -1.38
SEC28YIL076W GTF1P53260 183 aaPredicted RBP6.41□□□□□ -1.38
SEC28YIL076W CLU1Q03690 1277 aaKnown RBP6.41□□□□□ -1.38
SEC28YIL076W HRQ1Q05549 1077 aa6.41□□□□□ -1.38
SEC28YIL076W XYL2Q07993 356 aa6.41□□□□□ -1.38
SEC28YIL076W OPI10Q08202 246 aa6.41□□□□□ -1.38
SEC28YIL076W YKL151CP36059 337 aa6.4□□□□□ -1.38
SEC28YIL076W MBP1P39678 833 aa6.4□□□□□ -1.38
SEC28YIL076W KRI1P42846 591 aaKnown RBP6.4□□□□□ -1.38
SEC28YIL076W GPB1Q08886 897 aa6.4□□□□□ -1.38
SEC28YIL076W CDC6P09119 513 aa6.39□□□□□ -1.39
SEC28YIL076W VAC8P39968 578 aa6.39□□□□□ -1.39
SEC28YIL076W PBP1P53297 722 aaKnown RBP6.39□□□□□ -1.39
SEC28YIL076W ALD6P54115 500 aaKnown RBP6.39□□□□□ -1.39
SEC28YIL076W RXT3Q07458 294 aa6.39□□□□□ -1.39
SEC28YIL076W PAM1P37304 830 aaKnown RBP6.38□□□□□ -1.39
SEC28YIL076W GCV2P49095 1034 aa6.38□□□□□ -1.39
SEC28YIL076W ACK1Q07622 623 aaPredicted RBP6.38□□□□□ -1.39
SEC28YIL076W MDM38Q08179 573 aa6.38□□□□□ -1.39
SEC28YIL076W CDC20P26309 610 aa6.37□□□□□ -1.39
SEC28YIL076W DOM34P33309 386 aa6.37□□□□□ -1.39
SEC28YIL076W VBA5P36172 582 aa6.37□□□□□ -1.39
SEC28YIL076W SAH1P39954 449 aaKnown RBP6.37□□□□□ -1.39
SEC28YIL076W YLL058WQ12198 575 aa6.37□□□□□ -1.39
SEC28YIL076W OSW2Q12202 724 aa6.37□□□□□ -1.39
SEC28YIL076W CTS1P29029 562 aa6.36□□□□□ -1.39
SEC28YIL076W YAP1801P38856 637 aa6.36□□□□□ -1.39
SEC28YIL076W TAT2P38967 592 aa6.36□□□□□ -1.39
SEC28YIL076W YAP6Q03935 383 aa6.36□□□□□ -1.39
SEC28YIL076W EMC1P25574 760 aa6.35□□□□□ -1.39
SEC28YIL076W GIC1P38785 314 aa6.35□□□□□ -1.39
SEC28YIL076W ZRG8P40021 1076 aa6.35□□□□□ -1.39
SEC28YIL076W MND2P40577 368 aa6.35□□□□□ -1.39
SEC28YIL076W VPS62P53285 467 aa6.35□□□□□ -1.39
SEC28YIL076W SRT1Q03175 343 aa6.35□□□□□ -1.39
SEC28YIL076W SHE9Q04172 456 aa6.35□□□□□ -1.39
SEC28YIL076W DUS3Q06053 668 aaKnown RBP6.35□□□□□ -1.39
SEC28YIL076W HMI1Q12039 706 aa6.35□□□□□ -1.39
SEC28YIL076W ENA1P13587 1091 aa6.34□□□□□ -1.39
SEC28YIL076W SHM2P37291 469 aaKnown RBP6.34□□□□□ -1.39
SEC28YIL076W MPT5P39016 859 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
SEC28YIL076W ENA2Q01896 1091 aa6.34□□□□□ -1.39
SEC28YIL076W TMA10Q06177 86 aa6.34□□□□□ -1.39
SEC28YIL076W ENA5Q12691 1091 aa6.34□□□□□ -1.39
SEC28YIL076W FUN30P31380 1131 aa6.33□□□□□ -1.4
SEC28YIL076W CDC12P32468 407 aaKnown RBP6.33□□□□□ -1.4
SEC28YIL076W NPP2P39997 493 aa6.33□□□□□ -1.4
SEC28YIL076W SRP1Q02821 542 aaKnown RBP6.33□□□□□ -1.4
SEC28YIL076W TPO1Q07824 586 aa6.33□□□□□ -1.4
SEC28YIL076W SRP101P32916 621 aa6.32□□□□□ -1.4
SEC28YIL076W LST4P34239 828 aa6.32□□□□□ -1.4
SEC28YIL076W POA1P38218 177 aa6.32□□□□□ -1.4
SEC28YIL076W MRP8P35719 219 aa6.31□□□□□ -1.4
SEC28YIL076W GUS1P46655 708 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
SEC28YIL076W YLR224WQ05947 369 aa6.31□□□□□ -1.4
SEC28YIL076W TDA5Q06417 326 aaKnown RBP6.31□□□□□ -1.4
SEC28YIL076W ADY3Q07732 790 aa6.31□□□□□ -1.4
SEC28YIL076W ECM21P38167 1117 aaKnown RBP6.3□□□□□ -1.4
SEC28YIL076W SPF1P39986 1215 aaKnown RBP6.3□□□□□ -1.4
SEC28YIL076W YGR012WP53206 393 aa6.3□□□□□ -1.4
SEC28YIL076W YDR306CQ06640 478 aa6.3□□□□□ -1.4
SEC28YIL076W CDA1Q06702 301 aa6.3□□□□□ -1.4
SEC28YIL076W NOP12Q08208 459 aaKnown RBP6.3□□□□□ -1.4
SEC28YIL076W MET12P46151 657 aa6.29□□□□□ -1.4
SEC28YIL076W MCM6P53091 1017 aaKnown RBP6.29□□□□□ -1.4
SEC28YIL076W SFB2P53953 876 aa6.29□□□□□ -1.4
SEC28YIL076W STE5P32917 917 aa6.28□□□□□ -1.4
SEC28YIL076W PBY1P38254 753 aa6.28□□□□□ -1.4
SEC28YIL076W STE11P23561 717 aa6.27□□□□□ -1.41
SEC28YIL076W PPH3P32345 308 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 97.1 ms