RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APQ12	YIL040W	YOL073C	Q08232	322 aa		3.2	□□□□□ -1.9
APQ12	YIL040W	SYP1	P25623	870 aa	Known RBP	3.19	□□□□□ -1.9
APQ12	YIL040W	STB4	P50104	949 aa		3.19	□□□□□ -1.9
APQ12	YIL040W	TIM44	Q01852	431 aa		3.19	□□□□□ -1.9
APQ12	YIL040W	YLR040C	Q07988	224 aa		3.19	□□□□□ -1.9
APQ12	YIL040W	KCS1	Q12494	1050 aa		3.19	□□□□□ -1.9
APQ12	YIL040W	BI4	P03879	638 aa		3.18	□□□□□ -1.9
APQ12	YIL040W	PRE9	P23638	258 aa	Known RBP	3.18	□□□□□ -1.9
APQ12	YIL040W	YER158C	P40095	573 aa		3.18	□□□□□ -1.9
APQ12	YIL040W	RRT14	P40470	206 aa		3.18	□□□□□ -1.9
APQ12	YIL040W	CNN1	P43618	361 aa		3.18	□□□□□ -1.9
APQ12	YIL040W	HFM1	P51979	1187 aa		3.18	□□□□□ -1.9
APQ12	YIL040W	SIW14	P53965	281 aa		3.18	□□□□□ -1.9
APQ12	YIL040W	IRC10	Q08118	586 aa		3.18	□□□□□ -1.9
APQ12	YIL040W	SSA1	P10591	642 aa	Known RBP	3.17	□□□□□ -1.9
APQ12	YIL040W	CAD1	P24813	409 aa	Known RBP	3.17	□□□□□ -1.9
APQ12	YIL040W	MXR1	P40029	184 aa		3.17	□□□□□ -1.9
APQ12	YIL040W	CHA4	P43634	648 aa		3.17	□□□□□ -1.9
APQ12	YIL040W	ENB1	Q08299	606 aa		3.17	□□□□□ -1.9
APQ12	YIL040W	ACM1	Q08981	209 aa		3.17	□□□□□ -1.9
APQ12	YIL040W	ACF2	Q12168	779 aa		3.17	□□□□□ -1.9
APQ12	YIL040W	PEX2	P32800	271 aa		3.16	□□□□□ -1.9
APQ12	YIL040W	OMS1	Q06668	471 aa		3.16	□□□□□ -1.9
APQ12	YIL040W	NPC2	Q12408	173 aa		3.16	□□□□□ -1.9
APQ12	YIL040W	THS1	P04801	734 aa	Known RBP	3.15	□□□□□ -1.91
APQ12	YIL040W	HXK1	P04806	485 aa	Known RBP	3.15	□□□□□ -1.91
APQ12	YIL040W	DBP5	P20449	482 aa	Known RBP	3.15	□□□□□ -1.91
APQ12	YIL040W	MET4	P32389	672 aa		3.15	□□□□□ -1.91
APQ12	YIL040W	RPT1	P33299	467 aa	Known RBP	3.15	□□□□□ -1.91
APQ12	YIL040W	KTR4	P38131	464 aa		3.15	□□□□□ -1.91
APQ12	YIL040W	MRPS18	P42847	217 aa		3.15	□□□□□ -1.91
APQ12	YIL040W	THI12	P42883	340 aa		3.15	□□□□□ -1.91
APQ12	YIL040W	THI5	P43534	340 aa		3.15	□□□□□ -1.91
APQ12	YIL040W	ENT3	P47160	408 aa		3.15	□□□□□ -1.91
APQ12	YIL040W	THI11	P47183	340 aa		3.15	□□□□□ -1.91
APQ12	YIL040W	MRL1	Q06815	381 aa		3.15	□□□□□ -1.91
APQ12	YIL040W	THI13	Q07748	340 aa		3.15	□□□□□ -1.91
APQ12	YIL040W	SEC8	P32855	1065 aa		3.14	□□□□□ -1.91
APQ12	YIL040W	MCM7	P38132	845 aa		3.14	□□□□□ -1.91
APQ12	YIL040W	PSP2	P50109	593 aa	Known RBP	3.14	□□□□□ -1.91
APQ12	YIL040W	YGR012W	P53206	393 aa		3.14	□□□□□ -1.91
APQ12	YIL040W	MCD1	Q12158	566 aa		3.14	□□□□□ -1.91
APQ12	YIL040W	OSW2	Q12202	724 aa		3.14	□□□□□ -1.91
APQ12	YIL040W	RLF2	Q12495	606 aa		3.14	□□□□□ -1.91
APQ12	YIL040W	RPL11A	P0C0W9	174 aa	Known RBP	3.13	□□□□□ -1.91
APQ12	YIL040W	MTH1	P35198	433 aa		3.13	□□□□□ -1.91
APQ12	YIL040W	SPC42	P36094	363 aa		3.13	□□□□□ -1.91
APQ12	YIL040W	CCC2	P38995	1004 aa		3.13	□□□□□ -1.91
APQ12	YIL040W	GEM1	P39722	662 aa		3.13	□□□□□ -1.91
APQ12	YIL040W	XYL2	Q07993	356 aa		3.13	□□□□□ -1.91
APQ12	YIL040W	NDJ1	Q12366	352 aa		3.13	□□□□□ -1.91
APQ12	YIL040W	LAS17	Q12446	633 aa		3.13	□□□□□ -1.91
APQ12	YIL040W	RPL11B	Q3E757	174 aa	Predicted RBP	3.13	□□□□□ -1.91
APQ12	YIL040W	SPE1	P08432	466 aa		3.12	□□□□□ -1.91
APQ12	YIL040W	ERG4	P25340	473 aa		3.12	□□□□□ -1.91
APQ12	YIL040W	KAR4	P25583	335 aa		3.12	□□□□□ -1.91
APQ12	YIL040W	SRP101	P32916	621 aa		3.12	□□□□□ -1.91
APQ12	YIL040W	MPH1	P40562	993 aa		3.12	□□□□□ -1.91
APQ12	YIL040W	GND2	P53319	492 aa		3.12	□□□□□ -1.91
APQ12	YIL040W	AFT2	Q08957	416 aa		3.12	□□□□□ -1.91
APQ12	YIL040W	GNT1	Q12096	491 aa		3.12	□□□□□ -1.91
APQ12	YIL040W	SLA2	P33338	968 aa		3.11	□□□□□ -1.91
APQ12	YIL040W	YAP1801	P38856	637 aa		3.11	□□□□□ -1.91
APQ12	YIL040W	HXT13	P39924	564 aa		3.11	□□□□□ -1.91
APQ12	YIL040W	HXT17	P53631	564 aa		3.11	□□□□□ -1.91
APQ12	YIL040W	HXT15	P54854	567 aa		3.11	□□□□□ -1.91
APQ12	YIL040W	RNT1	Q02555	471 aa		3.11	□□□□□ -1.91
APQ12	YIL040W	MUK1	Q02866	612 aa		3.11	□□□□□ -1.91
APQ12	YIL040W	SPP382	Q06411	708 aa	Predicted RBP	3.11	□□□□□ -1.91
APQ12	YIL040W	DBP2	P24783	546 aa	Known RBP	3.1	□□□□□ -1.91
APQ12	YIL040W	PPX1	P38698	397 aa		3.1	□□□□□ -1.91
APQ12	YIL040W	BUL1	P48524	976 aa		3.1	□□□□□ -1.91
APQ12	YIL040W	NCS6	P53088	359 aa		3.09	□□□□□ -1.91
APQ12	YIL040W	CDA1	Q06702	301 aa		3.09	□□□□□ -1.91
APQ12	YIL040W	YAP7	Q08182	245 aa		3.09	□□□□□ -1.91
APQ12	YIL040W	HSF1	P10961	833 aa		3.08	□□□□□ -1.92
APQ12	YIL040W	ATG19	P35193	415 aa		3.08	□□□□□ -1.92
APQ12	YIL040W	GEF1	P37020	779 aa		3.08	□□□□□ -1.92
APQ12	YIL040W	YGR122W	P53272	402 aa		3.08	□□□□□ -1.92
APQ12	YIL040W	HBT1	Q07653	1046 aa	Known RBP	3.08	□□□□□ -1.92
APQ12	YIL040W	GUP2	Q08929	609 aa		3.08	□□□□□ -1.92
APQ12	YIL040W	ALG7	P07286	448 aa		3.07	□□□□□ -1.92
APQ12	YIL040W	MDM10	P18409	493 aa		3.07	□□□□□ -1.92
APQ12	YIL040W	TIF35	Q04067	274 aa	Known RBP	3.07	□□□□□ -1.92
APQ12	YIL040W	HOF1	Q05080	669 aa		3.07	□□□□□ -1.92
APQ12	YIL040W	WHI4	Q07655	649 aa	Known RBP	3.07	□□□□□ -1.92
APQ12	YIL040W	GCR1	P07261	785 aa		3.06	□□□□□ -1.92
APQ12	YIL040W	PPR1	P07272	904 aa	Predicted RBP	3.06	□□□□□ -1.92
APQ12	YIL040W	RAD2	P07276	1031 aa		3.06	□□□□□ -1.92
APQ12	YIL040W	TRP4	P07285	380 aa	Predicted RBP	3.06	□□□□□ -1.92
APQ12	YIL040W	RAD27	P26793	382 aa		3.06	□□□□□ -1.92
APQ12	YIL040W	PPZ2	P33329	710 aa		3.06	□□□□□ -1.92
APQ12	YIL040W	GNP1	P48813	663 aa		3.06	□□□□□ -1.92
APQ12	YIL040W	MTC3	P53077	123 aa		3.06	□□□□□ -1.92
APQ12	YIL040W	WHI5	Q12416	295 aa		3.06	□□□□□ -1.92
APQ12	YIL040W	ECM21	P38167	1117 aa	Known RBP	3.05	□□□□□ -1.92
APQ12	YIL040W	PNT1	P38969	423 aa		3.05	□□□□□ -1.92
APQ12	YIL040W	URM1	P40554	99 aa	Predicted RBP	3.05	□□□□□ -1.92
APQ12	YIL040W	RER2	P35196	286 aa		3.04	□□□□□ -1.92
APQ12	YIL040W	MSC6	Q08818	692 aa	Known RBP	3.04	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms