RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C MET6P05694 767 aaKnown RBP3.91□□□□□ -1.78
SSM4YIL030C UBP1P25037 809 aa3.91□□□□□ -1.78
SSM4YIL030C STM1P39015 273 aaKnown RBP3.91□□□□□ -1.78
SSM4YIL030C RIM8P53179 542 aa3.91□□□□□ -1.78
SSM4YIL030C ADA2Q02336 434 aa3.91□□□□□ -1.78
SSM4YIL030C DIG1Q03063 452 aaKnown RBP3.91□□□□□ -1.78
SSM4YIL030C USA1Q03714 838 aa3.91□□□□□ -1.78
SSM4YIL030C PFK2P16862 959 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78not detected
SSM4YIL030C HES1P35843 434 aa3.91□□□□□ -1.78
SSM4YIL030C TOS1P38288 455 aa3.91□□□□□ -1.78
SSM4YIL030C ICP55P40051 511 aa3.91□□□□□ -1.78
SSM4YIL030C HMO1Q03973 246 aaKnown RBP3.91□□□□□ -1.78
SSM4YIL030C SPC24Q04477 213 aa3.91□□□□□ -1.78
SSM4YIL030C OMS1Q06668 471 aa3.91□□□□□ -1.78
SSM4YIL030C MCH5Q08777 521 aa3.91□□□□□ -1.78
SSM4YIL030C SNU66Q12420 587 aaPredicted RBP3.91□□□□□ -1.78
SSM4YIL030C GFA1P14742 717 aaKnown RBP3.9□□□□□ -1.78
SSM4YIL030C YJL045WP47052 634 aa3.9□□□□□ -1.78
SSM4YIL030C SDA1P53313 767 aaKnown RBP3.9□□□□□ -1.78
SSM4YIL030C SRC1Q03707 834 aa3.9□□□□□ -1.78
SSM4YIL030C PPM1Q04081 328 aa3.9□□□□□ -1.78
SSM4YIL030C HEL2Q05580 639 aaKnown RBP3.9□□□□□ -1.78
SSM4YIL030C YOL019WQ08157 551 aa3.9□□□□□ -1.78
SSM4YIL030C CIR2Q08822 631 aa3.9□□□□□ -1.78
SSM4YIL030C GSY1P23337 708 aa3.9□□□□□ -1.79
SSM4YIL030C CDC15P27636 974 aa3.9□□□□□ -1.79
SSM4YIL030C CLB5P30283 435 aa3.9□□□□□ -1.79
SSM4YIL030C PTC3P34221 468 aaKnown RBP3.9□□□□□ -1.79
SSM4YIL030C MAL31P38156 614 aa3.9□□□□□ -1.79
SSM4YIL030C HEK2P38199 381 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
SSM4YIL030C AMN1P38285 549 aaPredicted RBP3.9□□□□□ -1.79
SSM4YIL030C GPB2P39717 880 aa3.9□□□□□ -1.79
SSM4YIL030C NDC80P40460 691 aa3.9□□□□□ -1.79
SSM4YIL030C CSM2P40465 213 aa3.9□□□□□ -1.79
SSM4YIL030C MKT1P40850 830 aaKnown RBP3.9□□□□□ -1.79
SSM4YIL030C VPS30Q02948 557 aa3.9□□□□□ -1.79
SSM4YIL030C STE6P12866 1290 aa3.9□□□□□ -1.79
SSM4YIL030C MIF2P35201 549 aa3.9□□□□□ -1.79
SSM4YIL030C GOS1P38736 223 aa3.9□□□□□ -1.79
SSM4YIL030C BUD6P41697 788 aa3.9□□□□□ -1.79
SSM4YIL030C CLU1Q03690 1277 aaKnown RBP3.9□□□□□ -1.79
SSM4YIL030C WHI4Q07655 649 aaKnown RBP3.9□□□□□ -1.79
SSM4YIL030C RIB2Q12362 591 aaKnown RBP3.9□□□□□ -1.79
SSM4YIL030C CLB1P24868 471 aa3.89□□□□□ -1.79
SSM4YIL030C NAM7P30771 971 aaKnown RBP3.89□□□□□ -1.79
SSM4YIL030C UGA4P32837 571 aa3.89□□□□□ -1.79
SSM4YIL030C AVL9Q12500 764 aa3.89□□□□□ -1.79
SSM4YIL030C TAL1P15019 335 aaKnown RBP3.89□□□□□ -1.79
SSM4YIL030C SRO9P25567 434 aaKnown RBP3.89□□□□□ -1.79
SSM4YIL030C SEC21P32074 935 aaKnown RBP3.89□□□□□ -1.79
SSM4YIL030C PYC2P32327 1180 aaKnown RBP3.89□□□□□ -1.79
SSM4YIL030C PLC1P32383 869 aa3.89□□□□□ -1.79
SSM4YIL030C SEG2P34250 1132 aa3.89□□□□□ -1.79
SSM4YIL030C VRP1P37370 817 aa3.89□□□□□ -1.79
SSM4YIL030C CTP1P38152 299 aa3.89□□□□□ -1.79
SSM4YIL030C UBP14P38237 781 aaKnown RBP3.89□□□□□ -1.79
SSM4YIL030C IRC8P47046 822 aa3.89□□□□□ -1.79
SSM4YIL030C TEL2P53038 688 aa3.89□□□□□ -1.79
SSM4YIL030C TFB2Q02939 513 aa3.89□□□□□ -1.79
SSM4YIL030C PRP42Q03776 544 aaKnown RBP3.89□□□□□ -1.79
SSM4YIL030C FAR8Q05040 523 aa3.89□□□□□ -1.79
SSM4YIL030C YLR326WQ06170 240 aaKnown RBP3.89□□□□□ -1.79
SSM4YIL030C YLR413WQ06689 675 aa3.89□□□□□ -1.79
SSM4YIL030C YDL057WQ07379 328 aa3.89□□□□□ -1.79
SSM4YIL030C FAP7Q12055 197 aaPredicted RBP3.89□□□□□ -1.79
SSM4YIL030C HXK1P04806 485 aaKnown RBP3.89□□□□□ -1.79
SSM4YIL030C VMA1P17255 1071 aaKnown RBP3.89□□□□□ -1.79
SSM4YIL030C ISW1P38144 1129 aa3.89□□□□□ -1.79
SSM4YIL030C PHO86P46956 311 aa3.89□□□□□ -1.79
SSM4YIL030C YGR054WP53235 642 aaKnown RBP3.89□□□□□ -1.79
SSM4YIL030C MDM1Q01846 1127 aa3.89□□□□□ -1.79
SSM4YIL030C REB1P21538 810 aa3.88□□□□□ -1.79
SSM4YIL030C SEC8P32855 1065 aa3.88□□□□□ -1.79
SSM4YIL030C OLA1P38219 394 aaKnown RBP3.88□□□□□ -1.79
SSM4YIL030C REI1P38344 393 aaPredicted RBP3.88□□□□□ -1.79
SSM4YIL030C PIH1P38768 344 aa3.88□□□□□ -1.79
SSM4YIL030C SYF1Q04048 859 aaPredicted RBP3.88□□□□□ -1.79
SSM4YIL030C DIB1Q06819 143 aaPredicted RBP3.88□□□□□ -1.79
SSM4YIL030C RLP24Q07915 199 aaKnown RBP3.88□□□□□ -1.79
SSM4YIL030C AFT2Q08957 416 aa3.88□□□□□ -1.79
SSM4YIL030C APL1P27351 700 aa3.88□□□□□ -1.79
SSM4YIL030C SIP2P34164 415 aaKnown RBP3.88□□□□□ -1.79
SSM4YIL030C SAP185P40856 1058 aa3.88□□□□□ -1.79
SSM4YIL030C OSH6Q02201 448 aa3.88□□□□□ -1.79
SSM4YIL030C UTP5Q04177 643 aaKnown RBP3.88□□□□□ -1.79
SSM4YIL030C RRB1Q04225 511 aaKnown RBP3.88□□□□□ -1.79
SSM4YIL030C UBX2Q04228 584 aa3.88□□□□□ -1.79
SSM4YIL030C PSF3Q12146 194 aa3.88□□□□□ -1.79
SSM4YIL030C GIS3Q12418 502 aa3.88□□□□□ -1.79
SSM4YIL030C SSB1P11484 613 aaKnown RBP3.88□□□□□ -1.79
SSM4YIL030C EXO70P19658 623 aa3.88□□□□□ -1.79
SSM4YIL030C END3P39013 349 aa3.88□□□□□ -1.79
SSM4YIL030C SSB2P40150 613 aaKnown RBP3.88□□□□□ -1.79
SSM4YIL030C EPL1P43572 832 aa3.88□□□□□ -1.79
SSM4YIL030C RTC4P53850 401 aa3.88□□□□□ -1.79
SSM4YIL030C FMP30Q02883 468 aa3.88□□□□□ -1.79
SSM4YIL030C YOL075CQ08234 1294 aa3.88□□□□□ -1.79
SSM4YIL030C GRE2Q12068 342 aaKnown RBP3.88□□□□□ -1.79
SSM4YIL030C SPO21Q12411 609 aa3.88□□□□□ -1.79
SSM4YIL030C YDL206WQ12424 762 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 116.4 ms