RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C POB3Q04636 552 aaKnown RBP3.32□□□□□ -1.88
NMD2YHR077C SMD2Q06217 110 aaKnown RBP3.32□□□□□ -1.88
NMD2YHR077C UTP4Q06679 776 aaKnown RBP3.32□□□□□ -1.88
NMD2YHR077C ESS1P22696 170 aa3.32□□□□□ -1.88
NMD2YHR077C TCD1P38756 429 aa3.32□□□□□ -1.88
NMD2YHR077C PIH1P38768 344 aa3.32□□□□□ -1.88
NMD2YHR077C GPD2P41911 440 aaKnown RBP3.32□□□□□ -1.88
NMD2YHR077C CTK3P46963 296 aaPredicted RBP3.32□□□□□ -1.88
NMD2YHR077C RRB1Q04225 511 aaKnown RBP3.32□□□□□ -1.88
NMD2YHR077C HCR1Q05775 265 aaKnown RBP3.32□□□□□ -1.88
NMD2YHR077C NBL1Q3E7Y6 73 aa3.32□□□□□ -1.88
NMD2YHR077C YLR278CQ05854 1341 aa3.32□□□□□ -1.88
NMD2YHR077C CST26P38226 397 aa3.31□□□□□ -1.88
NMD2YHR077C SUL1P38359 859 aa3.31□□□□□ -1.88
NMD2YHR077C ORC6P38826 435 aa3.31□□□□□ -1.88
NMD2YHR077C LCB2P40970 561 aa3.31□□□□□ -1.88
NMD2YHR077C YGL039WP53183 348 aaKnown RBP3.31□□□□□ -1.88
NMD2YHR077C ALD6P54115 500 aaKnown RBP3.31□□□□□ -1.88
NMD2YHR077C BUL2Q03758 920 aaKnown RBP3.31□□□□□ -1.88
NMD2YHR077C VAC14Q06708 880 aa3.31□□□□□ -1.88
NMD2YHR077C ATG20Q07528 640 aa3.31□□□□□ -1.88
NMD2YHR077C ARP6Q12509 438 aa3.31□□□□□ -1.88
NMD2YHR077C MUD2P36084 527 aaKnown RBP3.31□□□□□ -1.88
NMD2YHR077C TPS3P38426 1054 aaKnown RBP3.31□□□□□ -1.88
NMD2YHR077C FMS1P50264 508 aa3.31□□□□□ -1.88
NMD2YHR077C SDA1P53313 767 aaKnown RBP3.31□□□□□ -1.88
NMD2YHR077C DIP5P53388 608 aa3.31□□□□□ -1.88
NMD2YHR077C LAP2Q10740 671 aa3.31□□□□□ -1.88
NMD2YHR077C NOP14Q99207 810 aaKnown RBP3.31□□□□□ -1.88
NMD2YHR077C RIF1P29539 1916 aa3.31□□□□□ -1.88
NMD2YHR077C TRP2P00899 507 aaKnown RBP3.31□□□□□ -1.88
NMD2YHR077C MAK16P10962 306 aaPredicted RBP3.31□□□□□ -1.88
NMD2YHR077C PYC1P11154 1178 aaKnown RBP3.31□□□□□ -1.88
NMD2YHR077C SRO9P25567 434 aaKnown RBP3.31□□□□□ -1.88
NMD2YHR077C BCH2P36122 765 aa3.31□□□□□ -1.88
NMD2YHR077C PPS1P38148 807 aa3.31□□□□□ -1.88
NMD2YHR077C YBL028CP38202 106 aa3.31□□□□□ -1.88
NMD2YHR077C SIP3P38717 1229 aa3.31□□□□□ -1.88
NMD2YHR077C PES4P39684 611 aa3.31□□□□□ -1.88
NMD2YHR077C FIG4P42837 879 aa3.31□□□□□ -1.88
NMD2YHR077C EMP47P43555 445 aa3.31□□□□□ -1.88
NMD2YHR077C TOS3P43637 560 aa3.31□□□□□ -1.88
NMD2YHR077C YGR117CP53270 476 aa3.31□□□□□ -1.88
NMD2YHR077C BTN2P53286 410 aa3.31□□□□□ -1.88
NMD2YHR077C MFM1Q02783 413 aa3.31□□□□□ -1.88
NMD2YHR077C NOP6Q07623 225 aaKnown RBP3.31□□□□□ -1.88
NMD2YHR077C OXR1Q08952 273 aa3.31□□□□□ -1.88
NMD2YHR077C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
NMD2YHR077C MTF2P10849 440 aa3.3□□□□□ -1.88
NMD2YHR077C NAM7P30771 971 aaKnown RBP3.3□□□□□ -1.88
NMD2YHR077C REI1P38344 393 aaPredicted RBP3.3□□□□□ -1.88
NMD2YHR077C SPT8P38915 602 aa3.3□□□□□ -1.88
NMD2YHR077C VPS45P38932 577 aa3.3□□□□□ -1.88
NMD2YHR077C SDS3P40505 327 aa3.3□□□□□ -1.88
NMD2YHR077C MMM1P41800 426 aa3.3□□□□□ -1.88
NMD2YHR077C MIC19P43594 170 aa3.3□□□□□ -1.88
NMD2YHR077C VPS70P47161 811 aa3.3□□□□□ -1.88
NMD2YHR077C BNI5P53890 448 aaKnown RBP3.3□□□□□ -1.88
NMD2YHR077C SOV1Q04748 898 aa3.3□□□□□ -1.88
NMD2YHR077C SPO75Q07798 868 aa3.3□□□□□ -1.88
NMD2YHR077C TLG2Q08144 397 aa3.3□□□□□ -1.88
NMD2YHR077C YOR223WQ12015 292 aa3.3□□□□□ -1.88
NMD2YHR077C RRP6Q12149 733 aaKnown RBP3.3□□□□□ -1.88
NMD2YHR077C PMA1P05030 918 aaKnown RBP3.3□□□□□ -1.88
NMD2YHR077C SSB1P11484 613 aaKnown RBP3.3□□□□□ -1.88
NMD2YHR077C SUP45P12385 437 aaKnown RBP3.3□□□□□ -1.88
NMD2YHR077C CAP1P28495 268 aaKnown RBP3.3□□□□□ -1.88
NMD2YHR077C RAM2P29703 316 aa3.3□□□□□ -1.88
NMD2YHR077C SIS2P36024 562 aa3.3□□□□□ -1.88
NMD2YHR077C PHO88P38264 188 aaPredicted RBP3.3□□□□□ -1.88
NMD2YHR077C KIC1P38692 1080 aa3.3□□□□□ -1.88
NMD2YHR077C YER156CP40093 338 aaKnown RBP3.3□□□□□ -1.88
NMD2YHR077C SSB2P40150 613 aaKnown RBP3.3□□□□□ -1.88
NMD2YHR077C PGA2P53903 129 aa3.3□□□□□ -1.88
NMD2YHR077C DAS2Q12084 232 aa3.3□□□□□ -1.88
NMD2YHR077C YOL098CQ12496 1037 aa3.3□□□□□ -1.88
NMD2YHR077C PFK1P16861 987 aaKnown RBP3.29□□□□□ -1.88
NMD2YHR077C RPO26P20435 155 aa3.29□□□□□ -1.88
NMD2YHR077C CKI1P20485 582 aa3.29□□□□□ -1.88
NMD2YHR077C MRPL32P25348 183 aa3.29□□□□□ -1.88
NMD2YHR077C YEL043WP32618 956 aa3.29□□□□□ -1.88
NMD2YHR077C ECM32P32644 1121 aaKnown RBP3.29□□□□□ -1.88
NMD2YHR077C SAP190P36123 1033 aa3.29□□□□□ -1.88
NMD2YHR077C ISW1P38144 1129 aa3.29□□□□□ -1.88
NMD2YHR077C RGD1P38339 666 aa3.29□□□□□ -1.88
NMD2YHR077C VTC3Q02725 835 aa3.29□□□□□ -1.88
NMD2YHR077C VPS60Q03390 229 aa3.29□□□□□ -1.88
NMD2YHR077C OYE2Q03558 400 aaKnown RBP3.29□□□□□ -1.88
NMD2YHR077C UTP13Q05946 817 aaKnown RBP3.29□□□□□ -1.88
NMD2YHR077C CSR2Q12734 1121 aa3.29□□□□□ -1.88
NMD2YHR077C ILV1P00927 576 aaKnown RBP3.29□□□□□ -1.88
NMD2YHR077C CDC60P26637 1090 aaKnown RBP3.29□□□□□ -1.88
NMD2YHR077C SUV3P32580 737 aa3.29□□□□□ -1.88
NMD2YHR077C GLC3P32775 704 aa3.29□□□□□ -1.88
NMD2YHR077C KTR2P33550 425 aa3.29□□□□□ -1.88
NMD2YHR077C TRZ1P36159 838 aaPredicted RBP3.29□□□□□ -1.88
NMD2YHR077C CDC27P38042 758 aa3.29□□□□□ -1.88
NMD2YHR077C TDA3P38758 523 aa3.29□□□□□ -1.88
NMD2YHR077C CCT4P39078 528 aaKnown RBP3.29□□□□□ -1.88
NMD2YHR077C PUS2P53167 370 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms