RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C MRN1Q08925 612 aaKnown RBP RIP-Chip data9.44□□□□□ -0.9not detected
SOD2YHR008C IRA2P19158 3079 aa9.43□□□□□ -0.9
SOD2YHR008C EFT1P32324 842 aaKnown RBP9.43□□□□□ -0.9
SOD2YHR008C ISW1P38144 1129 aa9.43□□□□□ -0.9
SOD2YHR008C ZPR1P53303 486 aaKnown RBP9.43□□□□□ -0.9
SOD2YHR008C PHM6Q05637 104 aa9.43□□□□□ -0.9
SOD2YHR008C UBP11P36026 717 aa9.42□□□□□ -0.9
SOD2YHR008C YIR016WP40572 265 aa9.42□□□□□ -0.9
SOD2YHR008C ASE1P50275 885 aa9.42□□□□□ -0.9
SOD2YHR008C CRD1Q07560 283 aa9.42□□□□□ -0.9
SOD2YHR008C OXR1Q08952 273 aa9.42□□□□□ -0.9
SOD2YHR008C HIF1Q12373 385 aa9.42□□□□□ -0.9
SOD2YHR008C MAF1P41910 395 aa9.41□□□□□ -0.9
SOD2YHR008C ORC4P54791 529 aa9.41□□□□□ -0.9
SOD2YHR008C SPP1Q03012 353 aa9.41□□□□□ -0.9
SOD2YHR008C OYE2Q03558 400 aaKnown RBP9.41□□□□□ -0.9
SOD2YHR008C PML39Q03760 334 aa9.41□□□□□ -0.9
SOD2YHR008C PGK1P00560 416 aaKnown RBP9.4□□□□□ -0.9
SOD2YHR008C ADE2P21264 571 aaKnown RBP9.4□□□□□ -0.9
SOD2YHR008C BIO2P32451 375 aa9.4□□□□□ -0.9
SOD2YHR008C SEG2P34250 1132 aa9.4□□□□□ -0.9
SOD2YHR008C MGA2P40578 1113 aa9.4□□□□□ -0.9
SOD2YHR008C ACF4P47129 309 aa9.4□□□□□ -0.9
SOD2YHR008C MRI1Q06489 411 aaKnown RBP9.4□□□□□ -0.9
SOD2YHR008C HFI1Q12060 488 aa9.4□□□□□ -0.9
SOD2YHR008C YOR111WQ99210 232 aa9.4□□□□□ -0.9
SOD2YHR008C RIF1P29539 1916 aa9.4□□□□□ -0.9
SOD2YHR008C RPS9AO13516 197 aaKnown RBP9.39□□□□□ -0.91
SOD2YHR008C HIS5P07172 385 aa9.39□□□□□ -0.91
SOD2YHR008C PEX1P24004 1043 aa9.39□□□□□ -0.91
SOD2YHR008C JJJ3P47138 172 aa9.39□□□□□ -0.91
SOD2YHR008C WHI2P12611 486 aa9.38□□□□□ -0.91
SOD2YHR008C RNR3P21672 869 aaKnown RBP9.38□□□□□ -0.91
SOD2YHR008C ESS1P22696 170 aa9.38□□□□□ -0.91
SOD2YHR008C GCS1P35197 352 aa9.38□□□□□ -0.91
SOD2YHR008C RFC1P38630 861 aaKnown RBP9.38□□□□□ -0.91
SOD2YHR008C CAF120P53836 1060 aa9.38□□□□□ -0.91
SOD2YHR008C RAM1P22007 431 aa9.37□□□□□ -0.91
SOD2YHR008C CCL1P37366 393 aa9.37□□□□□ -0.91
SOD2YHR008C CNM67P53865 581 aaKnown RBP9.37□□□□□ -0.91
SOD2YHR008C PEX19Q07418 342 aa9.37□□□□□ -0.91
SOD2YHR008C HMG2P12684 1045 aa9.36□□□□□ -0.91
SOD2YHR008C CDC48P25694 835 aaKnown RBP9.36□□□□□ -0.91
SOD2YHR008C COY1P34237 679 aa9.36□□□□□ -0.91
SOD2YHR008C CCT3P39077 534 aaKnown RBP9.36□□□□□ -0.91
SOD2YHR008C XDJ1P39102 459 aa9.36□□□□□ -0.91
SOD2YHR008C LSB6P42951 607 aa9.36□□□□□ -0.91
SOD2YHR008C NSE1Q07913 336 aa9.36□□□□□ -0.91
SOD2YHR008C RIM20Q12033 661 aa9.36□□□□□ -0.91
SOD2YHR008C YLR422WQ06409 1932 aa9.36□□□□□ -0.91
SOD2YHR008C CIT1P00890 479 aa9.35□□□□□ -0.91
SOD2YHR008C SRO9P25567 434 aaKnown RBP9.35□□□□□ -0.91
SOD2YHR008C CSE2P33308 149 aa9.35□□□□□ -0.91
SOD2YHR008C YEL023CP39992 682 aa9.35□□□□□ -0.91
SOD2YHR008C GPD2P41911 440 aaKnown RBP9.35□□□□□ -0.91
SOD2YHR008C DOT1Q04089 582 aaKnown RBP9.35□□□□□ -0.91
SOD2YHR008C EST2Q06163 884 aa9.35□□□□□ -0.91
SOD2YHR008C DED1P06634 604 aaKnown RBP9.34□□□□□ -0.91
SOD2YHR008C SPE1P08432 466 aa9.34□□□□□ -0.91
SOD2YHR008C EAF5P39995 279 aa9.34□□□□□ -0.91
SOD2YHR008C VID28P40547 921 aa9.34□□□□□ -0.91
SOD2YHR008C LAM5P43560 674 aa9.34□□□□□ -0.91
SOD2YHR008C YML053CQ04978 212 aa9.34□□□□□ -0.91
SOD2YHR008C YDR341CQ05506 607 aaKnown RBP9.34□□□□□ -0.91
SOD2YHR008C COQ9Q05779 260 aa9.34□□□□□ -0.91
SOD2YHR008C SMC5Q08204 1093 aa9.34□□□□□ -0.91
SOD2YHR008C PIN2Q12057 282 aa9.34□□□□□ -0.91
SOD2YHR008C YOR022CQ12204 715 aa9.34□□□□□ -0.91
SOD2YHR008C MEX67Q99257 599 aaKnown RBP9.34□□□□□ -0.91
SOD2YHR008C CCH1P50077 2039 aa9.34□□□□□ -0.91
SOD2YHR008C RAD27P26793 382 aa9.33□□□□□ -0.92
SOD2YHR008C PGM1P33401 570 aaKnown RBP9.33□□□□□ -0.92
SOD2YHR008C RXT2P38255 430 aa9.33□□□□□ -0.92
SOD2YHR008C ATH1P48016 1211 aa9.33□□□□□ -0.92
SOD2YHR008C LEE1Q02799 301 aaKnown RBP9.33□□□□□ -0.92
SOD2YHR008C YML083CQ04526 418 aa9.33□□□□□ -0.92
SOD2YHR008C HOM2P13663 365 aaKnown RBP9.32□□□□□ -0.92
SOD2YHR008C SGF29P25554 259 aa9.32□□□□□ -0.92
SOD2YHR008C IMP2'P32351 346 aa9.32□□□□□ -0.92
SOD2YHR008C TMT1P32643 299 aa9.32□□□□□ -0.92
SOD2YHR008C FMO1P38866 432 aa9.32□□□□□ -0.92
SOD2YHR008C ENV11P53246 860 aa9.32□□□□□ -0.92
SOD2YHR008C PKH2Q12236 1081 aaKnown RBP9.32□□□□□ -0.92
SOD2YHR008C RSA4P25382 515 aaKnown RBP9.31□□□□□ -0.92
SOD2YHR008C AAP1P37898 856 aaKnown RBP9.31□□□□□ -0.92
SOD2YHR008C MSB2P32334 1306 aa9.31□□□□□ -0.92
SOD2YHR008C ATP1P07251 545 aaKnown RBP9.3□□□□□ -0.92
SOD2YHR008C PEP3P27801 918 aa9.3□□□□□ -0.92
SOD2YHR008C BFA1P47113 574 aa9.3□□□□□ -0.92
SOD2YHR008C YGR273CP53329 174 aa9.3□□□□□ -0.92
SOD2YHR008C SFB2P53953 876 aa9.3□□□□□ -0.92
SOD2YHR008C ROD1Q02805 837 aa9.3□□□□□ -0.92
SOD2YHR008C ESC8Q08119 714 aa9.3□□□□□ -0.92
SOD2YHR008C RLF2Q12495 606 aa9.3□□□□□ -0.92
SOD2YHR008C RAD50P12753 1312 aa9.3□□□□□ -0.92
SOD2YHR008C STI1P15705 589 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92not detected
SOD2YHR008C TPM1P17536 199 aaKnown RBP9.29□□□□□ -0.92
SOD2YHR008C GLN3P18494 730 aa9.29□□□□□ -0.92
SOD2YHR008C ZAP1P47043 880 aa9.29□□□□□ -0.92
SOD2YHR008C FAA4P47912 694 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 65.1 ms