RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B CYC1P00044 109 aaPredicted RBP2.11□□□□□ -2.07
YGR109W-BYGR109W-B DED1P06634 604 aaKnown RBP2.11□□□□□ -2.07
YGR109W-BYGR109W-B CDC20P26309 610 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B PET112P33893 541 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B RPS26AP39938 119 aaKnown RBP2.11□□□□□ -2.07
YGR109W-BYGR109W-B RPS26BP39939 119 aaKnown RBP2.11□□□□□ -2.07
YGR109W-BYGR109W-B TAF1P46677 1066 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B MSC2Q03455 724 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B TY1B-BRQ12193 1756 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B TY1B-GR3Q12316 1755 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B TY1B-ORQ92393 1755 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B HEM13P11353 328 aaKnown RBP2.11□□□□□ -2.07
YGR109W-BYGR109W-B GIS1Q03833 894 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B DUS4Q06063 367 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B GUP2Q08929 609 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B GAL10P04397 699 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B BAS1P22035 811 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B FUN30P31380 1131 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B SHM2P37291 469 aaKnown RBP2.11□□□□□ -2.07
YGR109W-BYGR109W-B GPB2P39717 880 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B SRP1Q02821 542 aaKnown RBP2.11□□□□□ -2.07
YGR109W-BYGR109W-B VMS1Q04311 632 aaKnown RBP2.11□□□□□ -2.07
YGR109W-BYGR109W-B ENB1Q08299 606 aa2.11□□□□□ -2.07
YGR109W-BYGR109W-B CDC34P14682 295 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B ACE2P21192 770 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B HCM1P25364 564 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B YKR078WP36158 585 aaKnown RBP2.1□□□□□ -2.07
YGR109W-BYGR109W-B NMD3P38861 518 aaKnown RBP2.1□□□□□ -2.07
YGR109W-BYGR109W-B YML020WQ03722 664 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B RRP15Q06511 250 aaPredicted RBP2.1□□□□□ -2.07
YGR109W-BYGR109W-B MYO2P19524 1574 aaKnown RBP2.1□□□□□ -2.07
YGR109W-BYGR109W-B DCG1P32460 244 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B FUN12P39730 1002 aaKnown RBP2.1□□□□□ -2.07
YGR109W-BYGR109W-B OSW2Q12202 724 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B REV3P14284 1504 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B GCR1P07261 785 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B YER152CP10356 443 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B HSF1P10961 833 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B MLS1P30952 554 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B PNT1P38969 423 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B MET12P46151 657 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B RCL1Q08096 367 aaPredicted RBP2.1□□□□□ -2.07
YGR109W-BYGR109W-B CMP2P14747 604 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B PEP7P32609 515 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B YKL107WP34251 309 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B RER2P35196 286 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B UGA2P38067 497 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B MCM7P38132 845 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B MND2P40577 368 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B RAT1Q02792 1006 aaKnown RBP2.1□□□□□ -2.07
YGR109W-BYGR109W-B PUS9Q12069 462 aa2.1□□□□□ -2.07
YGR109W-BYGR109W-B SBA1P28707 216 aaKnown RBP2.09□□□□□ -2.07
YGR109W-BYGR109W-B SLA2P33338 968 aa2.09□□□□□ -2.07
YGR109W-BYGR109W-B POA1P38218 177 aa2.09□□□□□ -2.07
YGR109W-BYGR109W-B PMA1P05030 918 aaKnown RBP2.09□□□□□ -2.07
YGR109W-BYGR109W-B HIS5P07172 385 aa2.09□□□□□ -2.07
YGR109W-BYGR109W-B RPL11AP0C0W9 174 aaKnown RBP2.09□□□□□ -2.07
YGR109W-BYGR109W-B YGL081WP53156 320 aa2.09□□□□□ -2.07
YGR109W-BYGR109W-B TIF35Q04067 274 aaKnown RBP2.09□□□□□ -2.07
YGR109W-BYGR109W-B RPL11BQ3E757 174 aaPredicted RBP2.09□□□□□ -2.07
YGR109W-BYGR109W-B AIM21P40563 679 aa2.09□□□□□ -2.08
YGR109W-BYGR109W-B MSE1P48525 536 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B ADY3Q07732 790 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B HMI1Q12039 706 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B TOP1P04786 769 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B DPB3P27344 201 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B TYW3P53177 273 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B TOS4Q06266 489 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B NTO1Q12311 748 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B CTF4Q01454 927 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B VPS30Q02948 557 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B YLR224WQ05947 369 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B IRC20Q06554 1556 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B OSW7P43611 510 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B CHA4P43634 648 aa2.08□□□□□ -2.08
YGR109W-BYGR109W-B MCM6P53091 1017 aaKnown RBP2.08□□□□□ -2.08
YGR109W-BYGR109W-B TRP2P00899 507 aaKnown RBP2.07□□□□□ -2.08
YGR109W-BYGR109W-B YBR238CP38330 731 aaKnown RBP2.07□□□□□ -2.08
YGR109W-BYGR109W-B YAP1801P38856 637 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B CCC2P38995 1004 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B ZRG8P40021 1076 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B VPS72Q03388 795 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B TPO1Q07824 586 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B VTS1Q08831 523 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
YGR109W-BYGR109W-B TAD3Q9URQ3 322 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B CDC6P09119 513 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B AGP1P25376 633 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B SHE9Q04172 456 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B INO1P11986 533 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B MRP8P35719 219 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B SNU71P53207 620 aaKnown RBP2.07□□□□□ -2.08
YGR109W-BYGR109W-B ROT1Q03691 256 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B AIM39Q08223 395 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B TY2B-LR1P0C2J3 1770 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B TY2B-FP0CX63 1770 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B TY2B-GR2P0CX64 1770 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B TY2B-CP25384 1770 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B TY2B-DR2Q03494 1770 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B TY1B-DR1Q03855 1755 aa2.07□□□□□ -2.08
YGR109W-BYGR109W-B TY2B-DR3Q07791 1770 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 90.8 ms