RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VMA21, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA21	YGR105W	YPL277C	Q08989	487 aa		4.88	□□□□□ -1.63
VMA21	YGR105W	RIB2	Q12362	591 aa	Known RBP	4.88	□□□□□ -1.63
VMA21	YGR105W	GAL10	P04397	699 aa		4.87	□□□□□ -1.63
VMA21	YGR105W	ACE2	P21192	770 aa		4.87	□□□□□ -1.63
VMA21	YGR105W	AGP1	P25376	633 aa		4.87	□□□□□ -1.63
VMA21	YGR105W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
VMA21	YGR105W	LAM1	P38851	1228 aa		4.87	□□□□□ -1.63
VMA21	YGR105W	PLB2	Q03674	706 aa		4.87	□□□□□ -1.63
VMA21	YGR105W	ATG13	Q06628	738 aa		4.87	□□□□□ -1.63
VMA21	YGR105W	RPS13	P05756	151 aa	Known RBP	4.86	□□□□□ -1.63
VMA21	YGR105W	KIN2	P13186	1147 aa	Known RBP	4.86	□□□□□ -1.63
VMA21	YGR105W	SBA1	P28707	216 aa	Known RBP	4.86	□□□□□ -1.63
VMA21	YGR105W	VBA5	P36172	582 aa		4.86	□□□□□ -1.63
VMA21	YGR105W	HFM1	P51979	1187 aa		4.86	□□□□□ -1.63
VMA21	YGR105W	RIM8	P53179	542 aa		4.86	□□□□□ -1.63
VMA21	YGR105W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
VMA21	YGR105W	THS1	P04801	734 aa	Known RBP	4.85	□□□□□ -1.63
VMA21	YGR105W	TOD6	P34219	525 aa		4.85	□□□□□ -1.63
VMA21	YGR105W	YKL151C	P36059	337 aa		4.85	□□□□□ -1.63
VMA21	YGR105W	MEF2	P39677	819 aa		4.85	□□□□□ -1.63
VMA21	YGR105W	MTC3	P53077	123 aa		4.85	□□□□□ -1.63
VMA21	YGR105W	HRQ1	Q05549	1077 aa		4.85	□□□□□ -1.63
VMA21	YGR105W	SOD2	P00447	233 aa		4.84	□□□□□ -1.63
VMA21	YGR105W	SNF7	P39929	240 aa	Known RBP	4.84	□□□□□ -1.63
VMA21	YGR105W	RRT14	P40470	206 aa		4.84	□□□□□ -1.63
VMA21	YGR105W	KRI1	P42846	591 aa	Known RBP	4.84	□□□□□ -1.63
VMA21	YGR105W	SPT20	P50875	604 aa		4.83	□□□□□ -1.64
VMA21	YGR105W	GCN5	Q03330	439 aa		4.83	□□□□□ -1.64
VMA21	YGR105W	YDR132C	Q03900	495 aa		4.83	□□□□□ -1.64
VMA21	YGR105W	XYL2	Q07993	356 aa		4.83	□□□□□ -1.64
VMA21	YGR105W	SAH1	P39954	449 aa	Known RBP	4.82	□□□□□ -1.64
VMA21	YGR105W	MSC2	Q03455	724 aa		4.82	□□□□□ -1.64
VMA21	YGR105W	SHE9	Q04172	456 aa		4.82	□□□□□ -1.64
VMA21	YGR105W	SIZ1	Q04195	904 aa		4.82	□□□□□ -1.64
VMA21	YGR105W	DUS4	Q06063	367 aa		4.82	□□□□□ -1.64
VMA21	YGR105W	MDM38	Q08179	573 aa		4.82	□□□□□ -1.64
VMA21	YGR105W	SPF1	P39986	1215 aa	Known RBP	4.81	□□□□□ -1.64
VMA21	YGR105W	TAF1	P46677	1066 aa		4.81	□□□□□ -1.64
VMA21	YGR105W	GTF1	P53260	183 aa	Predicted RBP	4.81	□□□□□ -1.64
VMA21	YGR105W	NOP7	P53261	605 aa	Known RBP	4.81	□□□□□ -1.64
VMA21	YGR105W	TDA5	Q06417	326 aa	Known RBP	4.81	□□□□□ -1.64
VMA21	YGR105W	ESC8	Q08119	714 aa		4.81	□□□□□ -1.64
VMA21	YGR105W	OSW2	Q12202	724 aa		4.81	□□□□□ -1.64
VMA21	YGR105W	STE5	P32917	917 aa		4.8	□□□□□ -1.64
VMA21	YGR105W	FLR1	P38124	548 aa		4.8	□□□□□ -1.64
VMA21	YGR105W	GCV2	P49095	1034 aa		4.8	□□□□□ -1.64
VMA21	YGR105W	DUS3	Q06053	668 aa	Known RBP	4.8	□□□□□ -1.64
VMA21	YGR105W	GIC1	P38785	314 aa		4.79	□□□□□ -1.64
VMA21	YGR105W	SRT1	Q03175	343 aa		4.79	□□□□□ -1.64
VMA21	YGR105W	YDR306C	Q06640	478 aa		4.79	□□□□□ -1.64
VMA21	YGR105W	GPB1	Q08886	897 aa		4.79	□□□□□ -1.64
VMA21	YGR105W	WRS1	Q12109	432 aa	Known RBP	4.79	□□□□□ -1.64
VMA21	YGR105W	YLL058W	Q12198	575 aa		4.79	□□□□□ -1.64
VMA21	YGR105W	CDC6	P09119	513 aa		4.78	□□□□□ -1.64
VMA21	YGR105W	ENA1	P13587	1091 aa		4.78	□□□□□ -1.64
VMA21	YGR105W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
VMA21	YGR105W	GRX1	P25373	110 aa	Known RBP	4.78	□□□□□ -1.64
VMA21	YGR105W	CDC12	P32468	407 aa	Known RBP	4.78	□□□□□ -1.64
VMA21	YGR105W	MRP8	P35719	219 aa		4.78	□□□□□ -1.64
VMA21	YGR105W	YBR184W	P38299	523 aa		4.78	□□□□□ -1.64
VMA21	YGR105W	YAP1801	P38856	637 aa		4.78	□□□□□ -1.64
VMA21	YGR105W	NPP2	P39997	493 aa		4.78	□□□□□ -1.64
VMA21	YGR105W	ENA2	Q01896	1091 aa		4.78	□□□□□ -1.64
VMA21	YGR105W	SRP1	Q02821	542 aa	Known RBP	4.78	□□□□□ -1.64
VMA21	YGR105W	RXT3	Q07458	294 aa		4.78	□□□□□ -1.64
VMA21	YGR105W	SSF2	Q12153	453 aa	Predicted RBP	4.78	□□□□□ -1.64
VMA21	YGR105W	ENA5	Q12691	1091 aa		4.78	□□□□□ -1.64
VMA21	YGR105W	CDC20	P26309	610 aa		4.77	□□□□□ -1.65
VMA21	YGR105W	PBY1	P38254	753 aa		4.77	□□□□□ -1.65
VMA21	YGR105W	ZRG8	P40021	1076 aa		4.77	□□□□□ -1.65
VMA21	YGR105W	IRR1	P40541	1150 aa		4.77	□□□□□ -1.65
VMA21	YGR105W	MND2	P40577	368 aa		4.77	□□□□□ -1.65
VMA21	YGR105W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
VMA21	YGR105W	PBP1	P53297	722 aa	Known RBP	4.77	□□□□□ -1.65
VMA21	YGR105W	SFB2	P53953	876 aa		4.77	□□□□□ -1.65
VMA21	YGR105W	ACK1	Q07622	623 aa	Predicted RBP	4.77	□□□□□ -1.65
VMA21	YGR105W	YLR358C	O13565	187 aa		4.76	□□□□□ -1.65
VMA21	YGR105W	YCR015C	P25616	317 aa		4.76	□□□□□ -1.65
VMA21	YGR105W	FUN30	P31380	1131 aa		4.76	□□□□□ -1.65
VMA21	YGR105W	YKL222C	P35995	705 aa		4.76	□□□□□ -1.65
VMA21	YGR105W	ECM21	P38167	1117 aa	Known RBP	4.76	□□□□□ -1.65
VMA21	YGR105W	GIP4	P39732	760 aa		4.76	□□□□□ -1.65
VMA21	YGR105W	EMC1	P25574	760 aa		4.75	□□□□□ -1.65
VMA21	YGR105W	PPH3	P32345	308 aa		4.75	□□□□□ -1.65
VMA21	YGR105W	AAR2	P32357	355 aa	Predicted RBP	4.75	□□□□□ -1.65
VMA21	YGR105W	SRP101	P32916	621 aa		4.75	□□□□□ -1.65
VMA21	YGR105W	DOM34	P33309	386 aa		4.75	□□□□□ -1.65
VMA21	YGR105W	VPS62	P53285	467 aa		4.75	□□□□□ -1.65
VMA21	YGR105W	CLU1	Q03690	1277 aa	Known RBP	4.75	□□□□□ -1.65
VMA21	YGR105W	YAP6	Q03935	383 aa		4.75	□□□□□ -1.65
VMA21	YGR105W	TPO1	Q07824	586 aa		4.75	□□□□□ -1.65
VMA21	YGR105W	POA1	P38218	177 aa		4.74	□□□□□ -1.65
VMA21	YGR105W	TAT2	P38967	592 aa		4.74	□□□□□ -1.65
VMA21	YGR105W	PFD1	P46988	109 aa		4.74	□□□□□ -1.65
VMA21	YGR105W	YGR012W	P53206	393 aa		4.74	□□□□□ -1.65
VMA21	YGR105W	HMI1	Q12039	706 aa		4.74	□□□□□ -1.65
VMA21	YGR105W	NPP1	P25353	742 aa		4.73	□□□□□ -1.65
VMA21	YGR105W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
VMA21	YGR105W	GYP7	P48365	746 aa		4.73	□□□□□ -1.65
VMA21	YGR105W	YLR224W	Q05947	369 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms