RNA–Protein interactions for RNA: YFR054C

YFR054C, Transcript of Dubious open reading frame, yeastyeast

Gene YFR054C, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFR054CYFR054C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
YFR054CYFR054C DUS3Q06053 668 aaKnown RBP4.03□□□□□ -1.76
YFR054CYFR054C TRP3P00937 484 aa4.02□□□□□ -1.77
YFR054CYFR054C ADE8P04161 214 aa4.02□□□□□ -1.77
YFR054CYFR054C RPL11AP0C0W9 174 aaKnown RBP4.02□□□□□ -1.77
YFR054CYFR054C TSR4P25040 408 aa4.02□□□□□ -1.77
YFR054CYFR054C RPN3P40016 523 aaKnown RBP4.02□□□□□ -1.77
YFR054CYFR054C IRC24P40580 263 aa4.02□□□□□ -1.77
YFR054CYFR054C TPP1Q03796 238 aa4.02□□□□□ -1.77
YFR054CYFR054C GIC2Q06648 383 aa4.02□□□□□ -1.77
YFR054CYFR054C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
YFR054CYFR054C RPL11BQ3E757 174 aaPredicted RBP4.02□□□□□ -1.77
YFR054CYFR054C NOP14Q99207 810 aaKnown RBP4.02□□□□□ -1.77
YFR054CYFR054C COQ4O13525 335 aa4.01□□□□□ -1.77
YFR054CYFR054C THS1P04801 734 aaKnown RBP4.01□□□□□ -1.77
YFR054CYFR054C SRM1P21827 482 aa4.01□□□□□ -1.77
YFR054CYFR054C MSH2P25847 964 aa4.01□□□□□ -1.77
YFR054CYFR054C DOM34P33309 386 aa4.01□□□□□ -1.77
YFR054CYFR054C BET3P36149 193 aa4.01□□□□□ -1.77
YFR054CYFR054C CCZ1P38273 704 aa4.01□□□□□ -1.77
YFR054CYFR054C PNT1P38969 423 aa4.01□□□□□ -1.77
YFR054CYFR054C GUS1P46655 708 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
YFR054CYFR054C YJL045WP47052 634 aa4.01□□□□□ -1.77
YFR054CYFR054C YJR142WP47173 342 aa4.01□□□□□ -1.77
YFR054CYFR054C RTA1P53047 317 aa4.01□□□□□ -1.77
YFR054CYFR054C YGR130CP53278 816 aa4.01□□□□□ -1.77
YFR054CYFR054C HOS3Q02959 697 aaKnown RBP4.01□□□□□ -1.77
YFR054CYFR054C PUS7Q08647 676 aaKnown RBP4.01□□□□□ -1.77
YFR054CYFR054C ACM1Q08981 209 aa4.01□□□□□ -1.77
YFR054CYFR054C HBN1Q96VH4 193 aa4.01□□□□□ -1.77
YFR054CYFR054C RPS4AP0CX35 261 aaKnown RBP4□□□□□ -1.77
YFR054CYFR054C RPS4BP0CX36 261 aaKnown RBP4□□□□□ -1.77
YFR054CYFR054C NAM7P30771 971 aaKnown RBP4□□□□□ -1.77
YFR054CYFR054C PUB1P32588 453 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
YFR054CYFR054C HBS1P32769 611 aaKnown RBP4□□□□□ -1.77
YFR054CYFR054C YRO2P38079 344 aa4□□□□□ -1.77
YFR054CYFR054C YBR284WP38150 797 aa4□□□□□ -1.77
YFR054CYFR054C NMD3P38861 518 aaKnown RBP4□□□□□ -1.77
YFR054CYFR054C SAH1P39954 449 aaKnown RBP4□□□□□ -1.77
YFR054CYFR054C ALT1P52893 592 aa4□□□□□ -1.77
YFR054CYFR054C TNA1P53322 534 aa4□□□□□ -1.77
YFR054CYFR054C UGO1Q03327 502 aa4□□□□□ -1.77
YFR054CYFR054C CYC7P00045 113 aa3.99□□□□□ -1.77
YFR054CYFR054C GSY1P23337 708 aa3.99□□□□□ -1.77
YFR054CYFR054C YSC84P32793 468 aa3.99□□□□□ -1.77
YFR054CYFR054C UGA2P38067 497 aa3.99□□□□□ -1.77
YFR054CYFR054C SIT1P39980 628 aa3.99□□□□□ -1.77
YFR054CYFR054C MXR1P40029 184 aa3.99□□□□□ -1.77
YFR054CYFR054C UBP6P43593 499 aaKnown RBP3.99□□□□□ -1.77
YFR054CYFR054C LCD1Q04377 747 aa3.99□□□□□ -1.77
YFR054CYFR054C NTG2Q08214 380 aa3.99□□□□□ -1.77
YFR054CYFR054C NBA1Q08229 501 aaKnown RBP3.99□□□□□ -1.77
YFR054CYFR054C MSD1P15179 658 aaKnown RBP3.98□□□□□ -1.77
YFR054CYFR054C MSB1P21339 1137 aaKnown RBP3.98□□□□□ -1.77
YFR054CYFR054C PRO1P32264 428 aa3.98□□□□□ -1.77
YFR054CYFR054C PEX6P33760 1030 aa3.98□□□□□ -1.77
YFR054CYFR054C PET10P36139 283 aa3.98□□□□□ -1.77
YFR054CYFR054C YHL012WP38709 493 aa3.98□□□□□ -1.77
YFR054CYFR054C CRP1P38845 465 aaKnown RBP3.98□□□□□ -1.77
YFR054CYFR054C DSS1P39112 969 aa3.98□□□□□ -1.77
YFR054CYFR054C GDH3P39708 457 aa3.98□□□□□ -1.77
YFR054CYFR054C MMM1P41800 426 aa3.98□□□□□ -1.77
YFR054CYFR054C AVT1P47082 602 aa3.98□□□□□ -1.77
YFR054CYFR054C BRE4Q07660 1125 aa3.98□□□□□ -1.77
YFR054CYFR054C RSB1Q08417 382 aa3.98□□□□□ -1.77
YFR054CYFR054C YOR059CQ08448 450 aaKnown RBP3.98□□□□□ -1.77
YFR054CYFR054C YPR071WQ12346 211 aa3.98□□□□□ -1.77
YFR054CYFR054C NSI1Q12457 570 aa3.98□□□□□ -1.77
YFR054CYFR054C ADR1P07248 1323 aa3.97□□□□□ -1.77
YFR054CYFR054C TOP3P13099 656 aa3.97□□□□□ -1.77
YFR054CYFR054C DBP2P24783 546 aaKnown RBP3.97□□□□□ -1.77
YFR054CYFR054C CDC12P32468 407 aaKnown RBP3.97□□□□□ -1.77
YFR054CYFR054C SLA2P33338 968 aa3.97□□□□□ -1.77
YFR054CYFR054C ALG2P43636 503 aa3.97□□□□□ -1.77
YFR054CYFR054C CCM1P48237 864 aaPredicted RBP3.97□□□□□ -1.77
YFR054CYFR054C DNM1P54861 757 aa3.97□□□□□ -1.77
YFR054CYFR054C SSB1P11484 613 aaKnown RBP3.96□□□□□ -1.78
YFR054CYFR054C RAD53P22216 821 aa3.96□□□□□ -1.78
YFR054CYFR054C REC104P33323 182 aa3.96□□□□□ -1.78
YFR054CYFR054C PIK1P39104 1066 aa3.96□□□□□ -1.78
YFR054CYFR054C SSB2P40150 613 aaKnown RBP3.96□□□□□ -1.78
YFR054CYFR054C CIT3P43635 486 aa3.96□□□□□ -1.78
YFR054CYFR054C CTH1P47976 325 aa3.96□□□□□ -1.78
YFR054CYFR054C HLJ1P48353 224 aa3.96□□□□□ -1.78
YFR054CYFR054C NIT3P49954 291 aa3.96□□□□□ -1.78
YFR054CYFR054C TFB2Q02939 513 aa3.96□□□□□ -1.78
YFR054CYFR054C YLL058WQ12198 575 aa3.96□□□□□ -1.78
YFR054CYFR054C PHR1P05066 565 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
YFR054CYFR054C RPL8AP17076 256 aaKnown RBP3.95□□□□□ -1.78
YFR054CYFR054C SRO9P25567 434 aaKnown RBP3.95□□□□□ -1.78
YFR054CYFR054C GRX4P32642 244 aa3.95□□□□□ -1.78
YFR054CYFR054C MDL2P33311 773 aa3.95□□□□□ -1.78
YFR054CYFR054C TOM20P35180 183 aa3.95□□□□□ -1.78
YFR054CYFR054C YVC1Q12324 675 aa3.95□□□□□ -1.78
YFR054CYFR054C BI4P03879 638 aa3.94□□□□□ -1.78
YFR054CYFR054C SNF5P18480 905 aa3.94□□□□□ -1.78
YFR054CYFR054C ELM1P32801 640 aa3.94□□□□□ -1.78
YFR054CYFR054C WHI3P34761 661 aaKnown RBP3.94□□□□□ -1.78
YFR054CYFR054C YKR078WP36158 585 aaKnown RBP3.94□□□□□ -1.78
YFR054CYFR054C BAP2P38084 609 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms