RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSN2	YDR443C	PSR2	Q07949	397 aa		3	□□□□□ -1.93
SSN2	YDR443C	APC11	Q12157	165 aa		3	□□□□□ -1.93
SSN2	YDR443C	STF1	P01098	86 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	RRP8	P38961	392 aa	Known RBP	2.99	□□□□□ -1.93
SSN2	YDR443C	SAH1	P39954	449 aa	Known RBP	2.99	□□□□□ -1.93
SSN2	YDR443C	IRR1	P40541	1150 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	NPY1	P53164	384 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	RAD51	P25454	400 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	KRR1	P25586	316 aa	Predicted RBP	2.99	□□□□□ -1.93
SSN2	YDR443C	NGR1	P32831	672 aa	Known RBP	2.99	□□□□□ -1.93
SSN2	YDR443C	DEF1	P35732	738 aa	Known RBP	2.99	□□□□□ -1.93
SSN2	YDR443C	YKL050C	P35736	922 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	TRZ1	P36159	838 aa	Predicted RBP	2.99	□□□□□ -1.93
SSN2	YDR443C	CCC2	P38995	1004 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	CAT8	P39113	1433 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	DPH6	Q12429	685 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	ORC2	P32833	620 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	RRN3	P36070	627 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	MUD2	P36084	527 aa	Known RBP	2.99	□□□□□ -1.93
SSN2	YDR443C	RSC8	P43609	557 aa	Known RBP	2.99	□□□□□ -1.93
SSN2	YDR443C	ESC8	Q08119	714 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	SMC6	Q12749	1114 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	UGA3	P26370	528 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	SAE2	P46946	345 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	YJR096W	P47137	282 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	ULP1	Q02724	621 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	YCS4	Q06156	1176 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	YLR001C	Q07895	862 aa		2.99	□□□□□ -1.93
SSN2	YDR443C	PRP5	P21372	849 aa	Predicted RBP	2.98	□□□□□ -1.93
SSN2	YDR443C	DAL7	P21826	554 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	MRP8	P35719	219 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	YHR218W	P38899	603 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	RSC4	Q02206	625 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	PLP2	Q12017	286 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	SWI5	P08153	709 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	PAN5	P38787	379 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	MBP1	P39678	833 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	YEL068C	P39977	110 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	CNN1	P43618	361 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	PCL10	P53124	433 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	MET13	P53128	600 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	AAC3	P18238	307 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	PGS1	P25578	521 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	SPC29	P33419	253 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	DHR2	P36009	735 aa	Predicted RBP	2.98	□□□□□ -1.93
SSN2	YDR443C	SRP72	P38688	640 aa	Known RBP	2.98	□□□□□ -1.93
SSN2	YDR443C	DJP1	P40564	432 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	CCT8	P47079	568 aa	Known RBP	2.98	□□□□□ -1.93
SSN2	YDR443C	CAF120	P53836	1060 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	SPO71	Q03868	1245 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	PGC1	Q08959	321 aa		2.98	□□□□□ -1.93
SSN2	YDR443C	YBT1	P32386	1661 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	TY1B-NL2	Q99337	1749 aa	Known RBP	2.97	□□□□□ -1.93
SSN2	YDR443C	TRP2	P00899	507 aa	Known RBP	2.97	□□□□□ -1.93
SSN2	YDR443C	SUI2	P20459	304 aa	Known RBP	2.97	□□□□□ -1.93
SSN2	YDR443C	RET1	P22276	1149 aa	Known RBP	2.97	□□□□□ -1.93
SSN2	YDR443C	BCD1	P38772	366 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	UTP8	P53276	713 aa	Known RBP	2.97	□□□□□ -1.93
SSN2	YDR443C	RBG2	P53295	368 aa	Known RBP	2.97	□□□□□ -1.93
SSN2	YDR443C	YPL109C	Q02981	657 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	SPO21	Q12411	609 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	PHO81	P17442	1178 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	AEP2	P22136	580 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	TRX1	P22217	103 aa	Known RBP	2.97	□□□□□ -1.93
SSN2	YDR443C	AGP1	P25376	633 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	ESL2	P36168	1195 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	TIF4631	P39935	952 aa	Known RBP	2.97	□□□□□ -1.93
SSN2	YDR443C	SEC27	P41811	889 aa	Known RBP	2.97	□□□□□ -1.93
SSN2	YDR443C	MRPL19	P53875	158 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	EIS1	Q05050	843 aa	Known RBP	2.97	□□□□□ -1.93
SSN2	YDR443C	RGA2	Q06407	1009 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	DBP10	Q12389	995 aa	Known RBP	2.97	□□□□□ -1.93
SSN2	YDR443C	AI4	P03878	556 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
SSN2	YDR443C	ACE2	P21192	770 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	FUN30	P31380	1131 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	NUD1	P32336	851 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	MCM7	P38132	845 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	RAD55	P38953	406 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	ACA1	P39970	489 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	DAN4	P47179	1161 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	TIM10	P87108	93 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	YLR287C	Q05881	355 aa		2.97	□□□□□ -1.93
SSN2	YDR443C	RRP9	Q06506	573 aa	Known RBP	2.97	□□□□□ -1.93
SSN2	YDR443C	SSM4	P40318	1319 aa		2.96	□□□□□ -1.93
SSN2	YDR443C	TPM1	P17536	199 aa	Known RBP	2.96	□□□□□ -1.93
SSN2	YDR443C	RAD53	P22216	821 aa		2.96	□□□□□ -1.93
SSN2	YDR443C	UBP1	P25037	809 aa		2.96	□□□□□ -1.93
SSN2	YDR443C	RKM3	P38222	552 aa		2.96	□□□□□ -1.93
SSN2	YDR443C	PBY1	P38254	753 aa		2.96	□□□□□ -1.93
SSN2	YDR443C	RSM26	P47141	266 aa		2.96	□□□□□ -1.93
SSN2	YDR443C	SGM1	P47166	707 aa		2.96	□□□□□ -1.93
SSN2	YDR443C	PBP1	P53297	722 aa	Known RBP	2.96	□□□□□ -1.93
SSN2	YDR443C	RAT1	Q02792	1006 aa	Known RBP	2.96	□□□□□ -1.93
SSN2	YDR443C	ADI1	Q03677	179 aa		2.96	□□□□□ -1.93
SSN2	YDR443C	YKU80	Q04437	629 aa		2.96	□□□□□ -1.93
SSN2	YDR443C	ECM38	Q05902	660 aa	Predicted RBP	2.96	□□□□□ -1.93
SSN2	YDR443C	SGD1	Q06132	899 aa		2.96	□□□□□ -1.93
SSN2	YDR443C	RSC58	Q07979	502 aa		2.96	□□□□□ -1.93
SSN2	YDR443C	SES1	P07284	462 aa	Known RBP	2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 216.5 ms