RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W SGD1Q06132 899 aa3.56□□□□□ -1.84
SNX41YDR425W ESC2Q06340 456 aa3.56□□□□□ -1.84
SNX41YDR425W OPI10Q08202 246 aa3.56□□□□□ -1.84
SNX41YDR425W CYC1P00044 109 aaPredicted RBP3.56□□□□□ -1.84
SNX41YDR425W YPL277CQ08989 487 aa3.56□□□□□ -1.84
SNX41YDR425W RPS13P05756 151 aaKnown RBP3.55□□□□□ -1.84
SNX41YDR425W KIN2P13186 1147 aaKnown RBP3.55□□□□□ -1.84
SNX41YDR425W ABD1P32783 436 aaPredicted RBP3.55□□□□□ -1.84
SNX41YDR425W DOM34P33309 386 aa3.55□□□□□ -1.84
SNX41YDR425W YKL151CP36059 337 aa3.55□□□□□ -1.84
SNX41YDR425W LAM1P38851 1228 aa3.55□□□□□ -1.84
SNX41YDR425W MEF2P39677 819 aa3.55□□□□□ -1.84
SNX41YDR425W CWC24P53769 259 aa3.55□□□□□ -1.84
SNX41YDR425W MSC2Q03455 724 aa3.55□□□□□ -1.84
SNX41YDR425W DUS4Q06063 367 aa3.55□□□□□ -1.84
SNX41YDR425W FAL1Q12099 399 aaKnown RBP3.55□□□□□ -1.84
SNX41YDR425W YKL069WP36088 180 aa3.54□□□□□ -1.84
SNX41YDR425W GCN5Q03330 439 aa3.54□□□□□ -1.84
SNX41YDR425W PLB2Q03674 706 aa3.54□□□□□ -1.84
SNX41YDR425W CDC6P09119 513 aa3.54□□□□□ -1.84
SNX41YDR425W VAC8P39968 578 aa3.54□□□□□ -1.84
SNX41YDR425W HFM1P51979 1187 aa3.54□□□□□ -1.84
SNX41YDR425W ALD6P54115 500 aaKnown RBP3.54□□□□□ -1.84
SNX41YDR425W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
SNX41YDR425W HRQ1Q05549 1077 aa3.54□□□□□ -1.84
SNX41YDR425W GAL10P04397 699 aa3.53□□□□□ -1.84
SNX41YDR425W PRE10P21242 288 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
SNX41YDR425W APL1P27351 700 aa3.53□□□□□ -1.84
SNX41YDR425W VBA5P36172 582 aa3.53□□□□□ -1.84
SNX41YDR425W ESC8Q08119 714 aa3.53□□□□□ -1.84
SNX41YDR425W CMP2P14747 604 aa3.52□□□□□ -1.85
SNX41YDR425W MBP1P39678 833 aa3.52□□□□□ -1.85
SNX41YDR425W SPF1P39986 1215 aaKnown RBP3.52□□□□□ -1.85
SNX41YDR425W GUS1P46655 708 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
SNX41YDR425W MDM38Q08179 573 aa3.52□□□□□ -1.85
SNX41YDR425W YCR015CP25616 317 aa3.52□□□□□ -1.85
SNX41YDR425W CDC12P32468 407 aaKnown RBP3.52□□□□□ -1.85
SNX41YDR425W TOD6P34219 525 aa3.52□□□□□ -1.85
SNX41YDR425W MRP8P35719 219 aa3.52□□□□□ -1.85
SNX41YDR425W FLR1P38124 548 aa3.52□□□□□ -1.85
SNX41YDR425W YAP1801P38856 637 aa3.52□□□□□ -1.85
SNX41YDR425W SSF2Q12153 453 aaPredicted RBP3.52□□□□□ -1.85
SNX41YDR425W PRI2P20457 528 aa3.51□□□□□ -1.85
SNX41YDR425W FUN30P31380 1131 aa3.51□□□□□ -1.85
SNX41YDR425W GIC1P38785 314 aa3.51□□□□□ -1.85
SNX41YDR425W TAT2P38967 592 aa3.51□□□□□ -1.85
SNX41YDR425W VPS62P53285 467 aa3.51□□□□□ -1.85
SNX41YDR425W PBP1P53297 722 aaKnown RBP3.51□□□□□ -1.85
SNX41YDR425W SRT1Q03175 343 aa3.51□□□□□ -1.85
SNX41YDR425W ROT1Q03691 256 aa3.51□□□□□ -1.85
SNX41YDR425W XYL2Q07993 356 aa3.51□□□□□ -1.85
SNX41YDR425W YOR352WQ08816 343 aa3.51□□□□□ -1.85
SNX41YDR425W CDC20P26309 610 aa3.5□□□□□ -1.85
SNX41YDR425W PBY1P38254 753 aa3.5□□□□□ -1.85
SNX41YDR425W IRR1P40541 1150 aa3.5□□□□□ -1.85
SNX41YDR425W TAF1P46677 1066 aa3.5□□□□□ -1.85
SNX41YDR425W CLU1Q03690 1277 aaKnown RBP3.5□□□□□ -1.85
SNX41YDR425W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
SNX41YDR425W YLR358CO13565 187 aa3.5□□□□□ -1.85
SNX41YDR425W STE5P32917 917 aa3.5□□□□□ -1.85
SNX41YDR425W MND2P40577 368 aa3.5□□□□□ -1.85
SNX41YDR425W SPT20P50875 604 aa3.5□□□□□ -1.85
SNX41YDR425W NOP7P53261 605 aaKnown RBP3.5□□□□□ -1.85
SNX41YDR425W SRP1Q02821 542 aaKnown RBP3.5□□□□□ -1.85
SNX41YDR425W RXT3Q07458 294 aa3.5□□□□□ -1.85
SNX41YDR425W ACK1Q07622 623 aaPredicted RBP3.5□□□□□ -1.85
SNX41YDR425W GPB1Q08886 897 aa3.5□□□□□ -1.85
SNX41YDR425W HMI1Q12039 706 aa3.5□□□□□ -1.85
SNX41YDR425W RPC82P32349 654 aa3.49□□□□□ -1.85
SNX41YDR425W YKR078WP36158 585 aaKnown RBP3.49□□□□□ -1.85
SNX41YDR425W ECM21P38167 1117 aaKnown RBP3.49□□□□□ -1.85
SNX41YDR425W YBR238CP38330 731 aaKnown RBP3.49□□□□□ -1.85
SNX41YDR425W SIT1P39980 628 aa3.49□□□□□ -1.85
SNX41YDR425W NPP2P39997 493 aa3.49□□□□□ -1.85
SNX41YDR425W PFD1P46988 109 aa3.49□□□□□ -1.85
SNX41YDR425W GYP7P48365 746 aa3.49□□□□□ -1.85
SNX41YDR425W TDA5Q06417 326 aaKnown RBP3.49□□□□□ -1.85
SNX41YDR425W ADY3Q07732 790 aa3.49□□□□□ -1.85
SNX41YDR425W OSW2Q12202 724 aa3.49□□□□□ -1.85
SNX41YDR425W SAH1P39954 449 aaKnown RBP3.48□□□□□ -1.85
SNX41YDR425W YKE2P52553 114 aa3.48□□□□□ -1.85
SNX41YDR425W CDA1Q06702 301 aa3.48□□□□□ -1.85
SNX41YDR425W STE11P23561 717 aa3.47□□□□□ -1.85
SNX41YDR425W AFR1P33304 620 aa3.47□□□□□ -1.85
SNX41YDR425W GIP4P39732 760 aa3.47□□□□□ -1.85
SNX41YDR425W MET12P46151 657 aa3.47□□□□□ -1.85
SNX41YDR425W DUS3Q06053 668 aaKnown RBP3.47□□□□□ -1.85
SNX41YDR425W NOP12Q08208 459 aaKnown RBP3.47□□□□□ -1.85
SNX41YDR425W GRX1P25373 110 aaKnown RBP3.47□□□□□ -1.85
SNX41YDR425W HBS1P32769 611 aaKnown RBP3.47□□□□□ -1.85
SNX41YDR425W TSL1P38427 1098 aaKnown RBP3.47□□□□□ -1.85
SNX41YDR425W BUL2Q03758 920 aaKnown RBP3.47□□□□□ -1.85
SNX41YDR425W TPO1Q07824 586 aa3.47□□□□□ -1.85
SNX41YDR425W WRS1Q12109 432 aaKnown RBP3.47□□□□□ -1.85
SNX41YDR425W EMC1P25574 760 aa3.46□□□□□ -1.86
SNX41YDR425W LST4P34239 828 aa3.46□□□□□ -1.86
SNX41YDR425W YBR184WP38299 523 aa3.46□□□□□ -1.86
SNX41YDR425W ZRG8P40021 1076 aa3.46□□□□□ -1.86
SNX41YDR425W CHA4P43634 648 aa3.46□□□□□ -1.86
SNX41YDR425W YGR012WP53206 393 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms