RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C YPR097WQ06839 1073 aa2.51□□□□□ -2.01
SSD1YDR293C CYC8P14922 966 aa2.51□□□□□ -2.01
SSD1YDR293C GAP1P19145 602 aaPredicted RBP2.51□□□□□ -2.01
SSD1YDR293C SQT1P35184 431 aa2.51□□□□□ -2.01
SSD1YDR293C YKL023WP36103 277 aaKnown RBP2.51□□□□□ -2.01
SSD1YDR293C SAP190P36123 1033 aa2.51□□□□□ -2.01
SSD1YDR293C MCM7P38132 845 aa2.51□□□□□ -2.01
SSD1YDR293C MAL31P38156 614 aa2.51□□□□□ -2.01
SSD1YDR293C RVS167P39743 482 aaKnown RBP2.51□□□□□ -2.01
SSD1YDR293C CIR1P42940 261 aa2.51□□□□□ -2.01
SSD1YDR293C RPL22BP56628 122 aaKnown RBP2.51□□□□□ -2.01
SSD1YDR293C SRC1Q03707 834 aa2.51□□□□□ -2.01
SSD1YDR293C LPD1P09624 499 aaKnown RBP2.5□□□□□ -2.01
SSD1YDR293C BYE1P36106 594 aa2.5□□□□□ -2.01
SSD1YDR293C BCD1P38772 366 aa2.5□□□□□ -2.01
SSD1YDR293C CUE3P53137 624 aaKnown RBP2.5□□□□□ -2.01
SSD1YDR293C RSC1P53236 928 aa2.5□□□□□ -2.01
SSD1YDR293C ARP5P53946 755 aa2.5□□□□□ -2.01
SSD1YDR293C NAN1Q02931 896 aaKnown RBP2.5□□□□□ -2.01
SSD1YDR293C TFB2Q02939 513 aa2.5□□□□□ -2.01
SSD1YDR293C HOS3Q02959 697 aaKnown RBP2.5□□□□□ -2.01
SSD1YDR293C AGE1Q04412 482 aa2.5□□□□□ -2.01
SSD1YDR293C HCR1Q05775 265 aaKnown RBP2.5□□□□□ -2.01
SSD1YDR293C EAF1Q06337 982 aa2.5□□□□□ -2.01
SSD1YDR293C DPH6Q12429 685 aa2.5□□□□□ -2.01
SSD1YDR293C GRX6Q12438 231 aa2.5□□□□□ -2.01
SSD1YDR293C ARD1P07347 238 aaPredicted RBP2.5□□□□□ -2.01
SSD1YDR293C DPB3P27344 201 aa2.5□□□□□ -2.01
SSD1YDR293C RTG1P32607 177 aa2.5□□□□□ -2.01
SSD1YDR293C ISW1P38144 1129 aa2.5□□□□□ -2.01
SSD1YDR293C RTS1P38903 757 aa2.5□□□□□ -2.01
SSD1YDR293C RAD55P38953 406 aa2.5□□□□□ -2.01
SSD1YDR293C XDJ1P39102 459 aa2.5□□□□□ -2.01
SSD1YDR293C RSP5P39940 809 aaKnown RBP2.5□□□□□ -2.01
SSD1YDR293C YFL034WP43564 1073 aa2.5□□□□□ -2.01
SSD1YDR293C YJR115WP47152 169 aa2.5□□□□□ -2.01
SSD1YDR293C MSH6Q03834 1242 aa2.5□□□□□ -2.01
SSD1YDR293C PIN2Q12057 282 aa2.5□□□□□ -2.01
SSD1YDR293C TMA17Q12513 150 aa2.5□□□□□ -2.01
SSD1YDR293C GCD6P32501 712 aaKnown RBP2.5□□□□□ -2.01
SSD1YDR293C FBP26P32604 452 aa2.5□□□□□ -2.01
SSD1YDR293C SMC2P38989 1170 aaKnown RBP2.5□□□□□ -2.01
SSD1YDR293C RAD26P40352 1085 aa2.5□□□□□ -2.01
SSD1YDR293C SPR3P41901 512 aa2.5□□□□□ -2.01
SSD1YDR293C ROG3P43602 733 aa2.5□□□□□ -2.01
SSD1YDR293C FYV8P46949 817 aaKnown RBP2.5□□□□□ -2.01
SSD1YDR293C IRC8P47046 822 aa2.5□□□□□ -2.01
SSD1YDR293C SAM37P50110 327 aa2.5□□□□□ -2.01
SSD1YDR293C VPS20Q04272 221 aa2.5□□□□□ -2.01
SSD1YDR293C YLR407WQ06070 228 aa2.5□□□□□ -2.01
SSD1YDR293C EST2Q06163 884 aa2.5□□□□□ -2.01
SSD1YDR293C GYP1Q08484 637 aa2.5□□□□□ -2.01
SSD1YDR293C RRI2Q12348 645 aa2.5□□□□□ -2.01
SSD1YDR293C FOB1O13329 566 aa2.49□□□□□ -2.01
SSD1YDR293C PFK2P16862 959 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SSD1YDR293C CNS1P33313 385 aa2.49□□□□□ -2.01
SSD1YDR293C CTM1P38818 585 aa2.49□□□□□ -2.01
SSD1YDR293C YAP1801P38856 637 aa2.49□□□□□ -2.01
SSD1YDR293C RGA1P39083 1007 aa2.49□□□□□ -2.01
SSD1YDR293C HXT10P43581 546 aa2.49□□□□□ -2.01
SSD1YDR293C COG4Q06096 861 aa2.49□□□□□ -2.01
SSD1YDR293C TSR1Q07381 788 aaKnown RBP2.49□□□□□ -2.01
SSD1YDR293C ALE1Q08548 619 aa2.49□□□□□ -2.01
SSD1YDR293C FAP7Q12055 197 aaPredicted RBP2.49□□□□□ -2.01
SSD1YDR293C GIN4Q12263 1142 aa2.49□□□□□ -2.01
SSD1YDR293C TY4B-HP0C2J7 1802 aa2.49□□□□□ -2.01
SSD1YDR293C TY4B-JP47024 1803 aa2.49□□□□□ -2.01
SSD1YDR293C SRB4P32569 687 aa2.49□□□□□ -2.01
SSD1YDR293C PFF1P38244 976 aa2.49□□□□□ -2.01
SSD1YDR293C NPR3P38742 1146 aa2.49□□□□□ -2.01
SSD1YDR293C CCT3P39077 534 aaKnown RBP2.49□□□□□ -2.01
SSD1YDR293C TPO2P53283 614 aa2.49□□□□□ -2.01
SSD1YDR293C ADE16P54113 591 aaKnown RBP2.49□□□□□ -2.01
SSD1YDR293C GFD1Q04839 188 aaKnown RBP2.49□□□□□ -2.01
SSD1YDR293C YPR084WQ06821 456 aa2.49□□□□□ -2.01
SSD1YDR293C ACK1Q07622 623 aaPredicted RBP2.49□□□□□ -2.01
SSD1YDR293C RIO1Q12196 484 aaKnown RBP2.49□□□□□ -2.01
SSD1YDR293C LDB19Q12502 818 aa2.49□□□□□ -2.01
SSD1YDR293C GAL11P19659 1081 aa2.49□□□□□ -2.01
SSD1YDR293C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01 RIP-Chip
SSD1YDR293C SAS3P34218 831 aa2.49□□□□□ -2.01
SSD1YDR293C BSD2P38356 321 aa2.49□□□□□ -2.01
SSD1YDR293C CIC1P38779 376 aaKnown RBP2.49□□□□□ -2.01
SSD1YDR293C CAJ1P39101 391 aa2.49□□□□□ -2.01
SSD1YDR293C VTC3Q02725 835 aa2.49□□□□□ -2.01
SSD1YDR293C MRD1Q06106 887 aaKnown RBP2.49□□□□□ -2.01
SSD1YDR293C CUR1Q06469 252 aa2.49□□□□□ -2.01
SSD1YDR293C TY1B-AO13527 1196 aaKnown RBP2.48□□□□□ -2.01
SSD1YDR293C GCR1P07261 785 aa2.48□□□□□ -2.01
SSD1YDR293C TFC4P33339 1025 aa2.48□□□□□ -2.01
SSD1YDR293C CCC2P38995 1004 aa2.48□□□□□ -2.01
SSD1YDR293C MBP1P39678 833 aa2.48□□□□□ -2.01
SSD1YDR293C BUD16P39988 312 aa2.48□□□□□ -2.01
SSD1YDR293C QDR2P40474 542 aa2.48□□□□□ -2.01
SSD1YDR293C CIR2Q08822 631 aa2.48□□□□□ -2.01
SSD1YDR293C NEW1Q08972 1196 aaKnown RBP2.48□□□□□ -2.01
SSD1YDR293C LSO1Q3E827 93 aa2.48□□□□□ -2.01
SSD1YDR293C PRT1P06103 763 aaKnown RBP2.48□□□□□ -2.01
SSD1YDR293C VPS35P34110 944 aa2.48□□□□□ -2.01
SSD1YDR293C TDA3P38758 523 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms