RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	SAH1	P39954	449 aa	Known RBP	6.45	□□□□□ -1.38
NSE3	YDR288W	CCT8	P47079	568 aa	Known RBP	6.45	□□□□□ -1.38
NSE3	YDR288W	RNH70	P53331	553 aa		6.45	□□□□□ -1.38
NSE3	YDR288W	YDL124W	Q07551	312 aa	Known RBP	6.45	□□□□□ -1.38
NSE3	YDR288W	CYC7	P00045	113 aa		6.44	□□□□□ -1.38
NSE3	YDR288W	SAM35	P14693	329 aa		6.44	□□□□□ -1.38
NSE3	YDR288W	AIM26	P32858	118 aa		6.44	□□□□□ -1.38
NSE3	YDR288W	PTC7	P38797	343 aa		6.44	□□□□□ -1.38
NSE3	YDR288W	OYE3	P41816	400 aa	Predicted RBP	6.44	□□□□□ -1.38
NSE3	YDR288W	RCL1	Q08096	367 aa	Predicted RBP	6.44	□□□□□ -1.38
NSE3	YDR288W	ADE8	P04161	214 aa		6.43	□□□□□ -1.38
NSE3	YDR288W	CIT2	P08679	460 aa		6.43	□□□□□ -1.38
NSE3	YDR288W	SNF5	P18480	905 aa		6.43	□□□□□ -1.38
NSE3	YDR288W	BAP2	P38084	609 aa		6.43	□□□□□ -1.38
NSE3	YDR288W	NMD2	P38798	1089 aa	Known RBP	6.43	□□□□□ -1.38
NSE3	YDR288W	GTS1	P40956	396 aa		6.43	□□□□□ -1.38
NSE3	YDR288W	YFL054C	P43549	646 aa		6.43	□□□□□ -1.38
NSE3	YDR288W	LSB3	P43603	459 aa	Known RBP	6.43	□□□□□ -1.38
NSE3	YDR288W	CAN1	P04817	590 aa		6.42	□□□□□ -1.38
NSE3	YDR288W	ADP1	P25371	1049 aa		6.42	□□□□□ -1.38
NSE3	YDR288W	NUP82	P40368	713 aa		6.42	□□□□□ -1.38
NSE3	YDR288W	BUD6	P41697	788 aa		6.42	□□□□□ -1.38
NSE3	YDR288W	RSC58	Q07979	502 aa		6.42	□□□□□ -1.38
NSE3	YDR288W	MED7	Q08278	222 aa		6.42	□□□□□ -1.38
NSE3	YDR288W	SLA2	P33338	968 aa		6.41	□□□□□ -1.38
NSE3	YDR288W	YRO2	P38079	344 aa		6.41	□□□□□ -1.38
NSE3	YDR288W	YBR284W	P38150	797 aa		6.41	□□□□□ -1.38
NSE3	YDR288W	PEX7	P39108	375 aa		6.41	□□□□□ -1.38
NSE3	YDR288W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.41	□□□□□ -1.38	not detected
NSE3	YDR288W	FOL2	P51601	243 aa	Known RBP	6.41	□□□□□ -1.38
NSE3	YDR288W	SSY1	Q03770	852 aa		6.41	□□□□□ -1.38
NSE3	YDR288W	SPS1	P08458	490 aa		6.4	□□□□□ -1.38
NSE3	YDR288W	GCD1	P09032	578 aa	Predicted RBP	6.4	□□□□□ -1.38
NSE3	YDR288W	TIM23	P32897	222 aa		6.4	□□□□□ -1.38
NSE3	YDR288W	YLR125W	Q12138	136 aa		6.4	□□□□□ -1.38
NSE3	YDR288W	TRP3	P00937	484 aa		6.39	□□□□□ -1.39
NSE3	YDR288W	BI4	P03879	638 aa		6.39	□□□□□ -1.39
NSE3	YDR288W	MET6	P05694	767 aa	Known RBP	6.39	□□□□□ -1.39
NSE3	YDR288W	PHO8	P11491	566 aa		6.39	□□□□□ -1.39
NSE3	YDR288W	TAF8	Q03750	510 aa		6.39	□□□□□ -1.39
NSE3	YDR288W	SVS1	Q12254	260 aa		6.39	□□□□□ -1.39
NSE3	YDR288W	TOM70	P07213	617 aa	Known RBP	6.38	□□□□□ -1.39
NSE3	YDR288W	HBS1	P32769	611 aa	Known RBP	6.38	□□□□□ -1.39
NSE3	YDR288W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	6.38	□□□□□ -1.39	not detected
NSE3	YDR288W	YPR071W	Q12346	211 aa		6.38	□□□□□ -1.39
NSE3	YDR288W	HBN1	Q96VH4	193 aa		6.38	□□□□□ -1.39
NSE3	YDR288W	THI4	P32318	326 aa		6.37	□□□□□ -1.39
NSE3	YDR288W	DOM34	P33309	386 aa		6.37	□□□□□ -1.39
NSE3	YDR288W	RFC5	P38251	354 aa		6.37	□□□□□ -1.39
NSE3	YDR288W	TOS1	P38288	455 aa		6.37	□□□□□ -1.39
NSE3	YDR288W	HRQ1	Q05549	1077 aa		6.37	□□□□□ -1.39
NSE3	YDR288W	PPM2	Q08282	695 aa		6.37	□□□□□ -1.39
NSE3	YDR288W	CDC12	P32468	407 aa	Known RBP	6.36	□□□□□ -1.39
NSE3	YDR288W	RRP14	P36080	434 aa	Known RBP	6.36	□□□□□ -1.39
NSE3	YDR288W	SIT1	P39980	628 aa		6.36	□□□□□ -1.39
NSE3	YDR288W	RRT14	P40470	206 aa		6.36	□□□□□ -1.39
NSE3	YDR288W	ALG12	P53730	551 aa		6.36	□□□□□ -1.39
NSE3	YDR288W	SDH1	Q00711	640 aa		6.36	□□□□□ -1.39
NSE3	YDR288W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	6.36	□□□□□ -1.39	not detected
NSE3	YDR288W	LCD1	Q04377	747 aa		6.36	□□□□□ -1.39
NSE3	YDR288W	ERR1	P0CX10	437 aa		6.35	□□□□□ -1.39
NSE3	YDR288W	ERR2	P0CX11	437 aa		6.35	□□□□□ -1.39
NSE3	YDR288W	LIP5	P32875	414 aa		6.35	□□□□□ -1.39
NSE3	YDR288W	YKR073C	P36153	106 aa		6.35	□□□□□ -1.39
NSE3	YDR288W	BRN1	P38170	754 aa		6.35	□□□□□ -1.39
NSE3	YDR288W	SEC26	P41810	973 aa	Known RBP	6.35	□□□□□ -1.39
NSE3	YDR288W	ALO1	P54783	526 aa	Known RBP	6.35	□□□□□ -1.39
NSE3	YDR288W	MDM38	Q08179	573 aa		6.35	□□□□□ -1.39
NSE3	YDR288W	YLL058W	Q12198	575 aa		6.35	□□□□□ -1.39
NSE3	YDR288W	OSW2	Q12202	724 aa		6.35	□□□□□ -1.39
NSE3	YDR288W	YKL151C	P36059	337 aa		6.34	□□□□□ -1.39
NSE3	YDR288W	RTA1	P53047	317 aa		6.34	□□□□□ -1.39
NSE3	YDR288W	POB3	Q04636	552 aa	Known RBP	6.34	□□□□□ -1.39
NSE3	YDR288W	YPR196W	Q06595	470 aa		6.34	□□□□□ -1.39
NSE3	YDR288W	ATG13	Q06628	738 aa		6.34	□□□□□ -1.39
NSE3	YDR288W	TOP3	P13099	656 aa		6.33	□□□□□ -1.4
NSE3	YDR288W	KIN2	P13186	1147 aa	Known RBP	6.33	□□□□□ -1.4
NSE3	YDR288W	MSD1	P15179	658 aa	Known RBP	6.33	□□□□□ -1.4
NSE3	YDR288W	ACE2	P21192	770 aa		6.33	□□□□□ -1.4
NSE3	YDR288W	APL1	P27351	700 aa		6.33	□□□□□ -1.4
NSE3	YDR288W	PET10	P36139	283 aa		6.33	□□□□□ -1.4
NSE3	YDR288W	BET3	P36149	193 aa		6.33	□□□□□ -1.4
NSE3	YDR288W	CCM1	P48237	864 aa	Predicted RBP	6.33	□□□□□ -1.4
NSE3	YDR288W	RSM24	Q03976	319 aa		6.33	□□□□□ -1.4
NSE3	YDR288W	OMA1	P36163	345 aa		6.32	□□□□□ -1.4
NSE3	YDR288W	UBP6	P43593	499 aa	Known RBP	6.32	□□□□□ -1.4
NSE3	YDR288W	HSV2	P50079	448 aa	Predicted RBP	6.32	□□□□□ -1.4
NSE3	YDR288W	REC104	P33323	182 aa		6.31	□□□□□ -1.4
NSE3	YDR288W	YER158C	P40095	573 aa		6.31	□□□□□ -1.4
NSE3	YDR288W	ENV11	P53246	860 aa		6.31	□□□□□ -1.4
NSE3	YDR288W	SRT1	Q03175	343 aa		6.31	□□□□□ -1.4
NSE3	YDR288W	YOR352W	Q08816	343 aa		6.31	□□□□□ -1.4
NSE3	YDR288W	FUN30	P31380	1131 aa		6.3	□□□□□ -1.4
NSE3	YDR288W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	6.3	□□□□□ -1.4	RIP-Chip
NSE3	YDR288W	HSP78	P33416	811 aa		6.3	□□□□□ -1.4
NSE3	YDR288W	YKR078W	P36158	585 aa	Known RBP	6.3	□□□□□ -1.4
NSE3	YDR288W	GYP7	P48365	746 aa		6.3	□□□□□ -1.4
NSE3	YDR288W	HFM1	P51979	1187 aa		6.3	□□□□□ -1.4
NSE3	YDR288W	MTC3	P53077	123 aa		6.3	□□□□□ -1.4
NSE3	YDR288W	BRE4	Q07660	1125 aa		6.3	□□□□□ -1.4

Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms