RNA–Protein interactions for RNA: YDR229W

IVY1, Transcript of Phospholipid-binding protein that interacts with both Ypt7p and Vps33p, yeast

Gene IVY1, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IVY1	YDR229W	YPR084W	Q06821	456 aa		7.22	□□□□□ -1.25
IVY1	YDR229W	RAD61	Q99359	647 aa		7.22	□□□□□ -1.25
IVY1	YDR229W	TUS1	Q06412	1307 aa		7.22	□□□□□ -1.25
IVY1	YDR229W	PCT1	P13259	424 aa		7.21	□□□□□ -1.25
IVY1	YDR229W	SAM2	P19358	384 aa	Known RBP	7.21	□□□□□ -1.25
IVY1	YDR229W	ISF1	P32488	338 aa		7.21	□□□□□ -1.25
IVY1	YDR229W	MRT4	P33201	236 aa	Known RBP	7.21	□□□□□ -1.25
IVY1	YDR229W	TOM71	P38825	639 aa	Known RBP	7.21	□□□□□ -1.25
IVY1	YDR229W	BRE2	P43132	505 aa		7.21	□□□□□ -1.25
IVY1	YDR229W	YGR125W	P53273	1036 aa		7.21	□□□□□ -1.25
IVY1	YDR229W	CWC22	P53333	577 aa	Known RBP	7.21	□□□□□ -1.25
IVY1	YDR229W	CEF1	Q03654	590 aa	Predicted RBP	7.21	□□□□□ -1.25
IVY1	YDR229W	MRD1	Q06106	887 aa	Known RBP	7.21	□□□□□ -1.25
IVY1	YDR229W	MCM16	Q12262	181 aa		7.21	□□□□□ -1.25
IVY1	YDR229W	YGR161W-C	Q3E744	92 aa		7.21	□□□□□ -1.25
IVY1	YDR229W	RAD18	P10862	487 aa		7.2	□□□□□ -1.26
IVY1	YDR229W	COQ1	P18900	473 aa		7.2	□□□□□ -1.26
IVY1	YDR229W	OSH3	P38713	996 aa	Known RBP	7.2	□□□□□ -1.26
IVY1	YDR229W	DJP1	P40564	432 aa		7.2	□□□□□ -1.26
IVY1	YDR229W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	7.2	□□□□□ -1.26	not detected
IVY1	YDR229W	RMD1	Q03441	430 aa		7.2	□□□□□ -1.26
IVY1	YDR229W	AHC1	Q12433	566 aa		7.2	□□□□□ -1.26
IVY1	YDR229W	NOP58	Q12499	511 aa	Known RBP	7.2	□□□□□ -1.26
IVY1	YDR229W	LAM4	P38800	1345 aa		7.2	□□□□□ -1.26
IVY1	YDR229W	SUP45	P12385	437 aa	Known RBP	7.2	□□□□□ -1.26
IVY1	YDR229W	KTR2	P33550	425 aa		7.2	□□□□□ -1.26
IVY1	YDR229W	VPS24	P36095	224 aa	Known RBP	7.2	□□□□□ -1.26
IVY1	YDR229W	PHO88	P38264	188 aa	Predicted RBP	7.2	□□□□□ -1.26
IVY1	YDR229W	RRP8	P38961	392 aa	Known RBP	7.2	□□□□□ -1.26
IVY1	YDR229W	VPS8	P39702	1274 aa		7.2	□□□□□ -1.26
IVY1	YDR229W	PTK2	P47116	818 aa	Known RBP	7.2	□□□□□ -1.26
IVY1	YDR229W	YGL081W	P53156	320 aa		7.2	□□□□□ -1.26
IVY1	YDR229W	ENT2	Q05785	613 aa		7.2	□□□□□ -1.26
IVY1	YDR229W	RRP15	Q06511	250 aa	Predicted RBP	7.2	□□□□□ -1.26
IVY1	YDR229W	FRA1	Q07825	749 aa		7.2	□□□□□ -1.26
IVY1	YDR229W	TAH18	Q12181	623 aa		7.2	□□□□□ -1.26
IVY1	YDR229W	CHO2	P05374	869 aa	Known RBP	7.19	□□□□□ -1.26
IVY1	YDR229W	CIT2	P08679	460 aa		7.19	□□□□□ -1.26
IVY1	YDR229W	SAM1	P10659	382 aa	Known RBP	7.19	□□□□□ -1.26
IVY1	YDR229W	ATE1	P16639	503 aa		7.19	□□□□□ -1.26
IVY1	YDR229W	SEC8	P32855	1065 aa		7.19	□□□□□ -1.26
IVY1	YDR229W	VAC8	P39968	578 aa		7.19	□□□□□ -1.26
IVY1	YDR229W	EMW1	P42842	904 aa	Known RBP	7.19	□□□□□ -1.26
IVY1	YDR229W	MRPS35	P53292	345 aa		7.19	□□□□□ -1.26
IVY1	YDR229W	CTR9	P89105	1077 aa		7.19	□□□□□ -1.26
IVY1	YDR229W	COG4	Q06096	861 aa		7.19	□□□□□ -1.26
IVY1	YDR229W	ENO2	P00925	437 aa	Known RBP	7.18	□□□□□ -1.26
IVY1	YDR229W	HIP1	P06775	603 aa		7.18	□□□□□ -1.26
IVY1	YDR229W	MIP1	P15801	1254 aa		7.18	□□□□□ -1.26
IVY1	YDR229W	ACE2	P21192	770 aa		7.18	□□□□□ -1.26
IVY1	YDR229W	MSP1	P28737	362 aa		7.18	□□□□□ -1.26
IVY1	YDR229W	PRO3	P32263	286 aa	Known RBP	7.18	□□□□□ -1.26
IVY1	YDR229W	MGE1	P38523	228 aa		7.18	□□□□□ -1.26
IVY1	YDR229W	SKP2	P42843	763 aa		7.18	□□□□□ -1.26
IVY1	YDR229W	MAG2	Q06436	670 aa	Known RBP	7.18	□□□□□ -1.26
IVY1	YDR229W	YMR084W	A2P2R3	262 aa		7.17	□□□□□ -1.26
IVY1	YDR229W	YUR1	P26725	428 aa		7.17	□□□□□ -1.26
IVY1	YDR229W	DPB3	P27344	201 aa		7.17	□□□□□ -1.26
IVY1	YDR229W	TGL1	P34163	548 aa		7.17	□□□□□ -1.26
IVY1	YDR229W	SHP1	P34223	423 aa		7.17	□□□□□ -1.26
IVY1	YDR229W	BLI1	P35727	113 aa		7.17	□□□□□ -1.26
IVY1	YDR229W	MSC7	P38694	644 aa		7.17	□□□□□ -1.26
IVY1	YDR229W	ERP5	P38819	212 aa		7.17	□□□□□ -1.26
IVY1	YDR229W	ESF2	P53743	316 aa	Known RBP	7.17	□□□□□ -1.26
IVY1	YDR229W	SLD5	Q03406	294 aa		7.17	□□□□□ -1.26
IVY1	YDR229W	OPI1	P21957	404 aa		7.16	□□□□□ -1.26
IVY1	YDR229W	MET1	P36150	593 aa		7.16	□□□□□ -1.26
IVY1	YDR229W	RIX1	P38883	763 aa	Predicted RBP	7.16	□□□□□ -1.26
IVY1	YDR229W	YHR219W	P38900	624 aa		7.16	□□□□□ -1.26
IVY1	YDR229W	PES4	P39684	611 aa		7.16	□□□□□ -1.26
IVY1	YDR229W	UFD2	P54860	961 aa		7.16	□□□□□ -1.26
IVY1	YDR229W	RPS15	Q01855	142 aa	Known RBP	7.16	□□□□□ -1.26
IVY1	YDR229W	SPH1	Q06160	661 aa		7.16	□□□□□ -1.26
IVY1	YDR229W	UBR2	Q07963	1872 aa		7.15	□□□□□ -1.26
IVY1	YDR229W	RIT1	P23796	513 aa		7.15	□□□□□ -1.26
IVY1	YDR229W	MKS1	P34072	584 aa		7.15	□□□□□ -1.26
IVY1	YDR229W	VPS53	P47061	822 aa		7.15	□□□□□ -1.26
IVY1	YDR229W	YJR115W	P47152	169 aa		7.15	□□□□□ -1.26
IVY1	YDR229W	DUS3	Q06053	668 aa	Known RBP	7.15	□□□□□ -1.26
IVY1	YDR229W	ERP3	Q12403	225 aa		7.15	□□□□□ -1.26
IVY1	YDR229W	NKP1	Q12493	238 aa		7.15	□□□□□ -1.26
IVY1	YDR229W	YDR461C-A	Q2V2P7	80 aa		7.15	□□□□□ -1.26
IVY1	YDR229W	CDC16	P09798	840 aa		7.14	□□□□□ -1.27
IVY1	YDR229W	HEM1	P09950	548 aa	Predicted RBP	7.14	□□□□□ -1.27
IVY1	YDR229W	POX1	P13711	748 aa		7.14	□□□□□ -1.27
IVY1	YDR229W	MCM4	P30665	933 aa	Known RBP	7.14	□□□□□ -1.27
IVY1	YDR229W	MYO3	P36006	1272 aa		7.14	□□□□□ -1.27
IVY1	YDR229W	MCR1	P36060	302 aa	Known RBP	7.14	□□□□□ -1.27
IVY1	YDR229W	SCS3	P53012	380 aa		7.14	□□□□□ -1.27
IVY1	YDR229W	YGL039W	P53183	348 aa	Known RBP	7.14	□□□□□ -1.27
IVY1	YDR229W	FOL1	P53848	824 aa		7.14	□□□□□ -1.27
IVY1	YDR229W	DAK1	P54838	584 aa	Known RBP	7.14	□□□□□ -1.27
IVY1	YDR229W	VPS30	Q02948	557 aa		7.14	□□□□□ -1.27
IVY1	YDR229W	VMS1	Q04311	632 aa	Known RBP	7.14	□□□□□ -1.27
IVY1	YDR229W	RLP24	Q07915	199 aa	Known RBP	7.14	□□□□□ -1.27
IVY1	YDR229W	LSP1	Q12230	341 aa	Known RBP	7.14	□□□□□ -1.27
IVY1	YDR229W	YDR524C-B	Q3E6R4	66 aa		7.14	□□□□□ -1.27
IVY1	YDR229W	RPN12	P32496	274 aa		7.13	□□□□□ -1.27
IVY1	YDR229W	SEC6	P32844	805 aa		7.13	□□□□□ -1.27
IVY1	YDR229W	DBP7	P36120	742 aa	Known RBP	7.13	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 70.7 ms