RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W EST1P17214 699 aaPredicted RBP2.48□□□□□ -2.01
SIR4YDR227W CDC42P19073 191 aa2.48□□□□□ -2.01
SIR4YDR227W RMA1P36001 430 aaKnown RBP2.48□□□□□ -2.01
SIR4YDR227W ARL1P38116 183 aaKnown RBP2.48□□□□□ -2.01
SIR4YDR227W BOL3P39724 118 aa2.48□□□□□ -2.01
SIR4YDR227W HSV2P50079 448 aaPredicted RBP2.48□□□□□ -2.01
SIR4YDR227W ULP1Q02724 621 aa2.48□□□□□ -2.01
SIR4YDR227W YDL124WQ07551 312 aaKnown RBP2.48□□□□□ -2.01
SIR4YDR227W WHI4Q07655 649 aaKnown RBP2.48□□□□□ -2.01
SIR4YDR227W GYP5Q12344 894 aa2.48□□□□□ -2.01
SIR4YDR227W APA1P16550 321 aaKnown RBP2.48□□□□□ -2.01
SIR4YDR227W SRP72P38688 640 aaKnown RBP2.48□□□□□ -2.01
SIR4YDR227W SAP185P40856 1058 aa2.48□□□□□ -2.01
SIR4YDR227W DAL4Q04895 635 aa2.48□□□□□ -2.01
SIR4YDR227W GAS5Q08193 484 aa2.48□□□□□ -2.01
SIR4YDR227W SEC23P15303 768 aaKnown RBP2.47□□□□□ -2.01
SIR4YDR227W DAL5P15365 543 aa2.47□□□□□ -2.01
SIR4YDR227W HCA4P20448 770 aaKnown RBP2.47□□□□□ -2.01
SIR4YDR227W ISC10P32645 267 aa2.47□□□□□ -2.01
SIR4YDR227W RDH54P38086 958 aa2.47□□□□□ -2.01
SIR4YDR227W PTI1P39927 425 aaPredicted RBP2.47□□□□□ -2.01
SIR4YDR227W HOS4P40480 1083 aa2.47□□□□□ -2.01
SIR4YDR227W GPI8P49018 411 aa2.47□□□□□ -2.01
SIR4YDR227W VPS16Q03308 798 aa2.47□□□□□ -2.01
SIR4YDR227W SPO75Q07798 868 aa2.47□□□□□ -2.01
SIR4YDR227W SMC6Q12749 1114 aa2.47□□□□□ -2.01
SIR4YDR227W SSM4P40318 1319 aa2.47□□□□□ -2.01
SIR4YDR227W VMA4P22203 233 aaKnown RBP2.47□□□□□ -2.01
SIR4YDR227W VMA8P32610 256 aaKnown RBP2.47□□□□□ -2.01
SIR4YDR227W CNS1P33313 385 aa2.47□□□□□ -2.01
SIR4YDR227W SAS3P34218 831 aa2.47□□□□□ -2.01
SIR4YDR227W CCC2P38995 1004 aa2.47□□□□□ -2.01
SIR4YDR227W POL5P39985 1022 aaKnown RBP2.47□□□□□ -2.01
SIR4YDR227W JHD1P40034 492 aa2.47□□□□□ -2.01
SIR4YDR227W VPS53P47061 822 aa2.47□□□□□ -2.01
SIR4YDR227W ELP4Q02884 456 aaKnown RBP2.47□□□□□ -2.01
SIR4YDR227W SXM1Q04175 944 aaKnown RBP2.47□□□□□ -2.01
SIR4YDR227W MDM38Q08179 573 aa2.47□□□□□ -2.01
SIR4YDR227W FLC1Q08967 793 aa2.47□□□□□ -2.01
SIR4YDR227W DAL7P21826 554 aa2.47□□□□□ -2.01
SIR4YDR227W RPB10P22139 70 aa2.47□□□□□ -2.01
SIR4YDR227W PRP19P32523 503 aaKnown RBP2.47□□□□□ -2.01
SIR4YDR227W ORC2P32833 620 aa2.47□□□□□ -2.01
SIR4YDR227W PEX5P35056 612 aa2.47□□□□□ -2.01
SIR4YDR227W ATG14P38270 344 aa2.47□□□□□ -2.01
SIR4YDR227W UBP7P40453 1071 aa2.47□□□□□ -2.01
SIR4YDR227W VPS30Q02948 557 aa2.47□□□□□ -2.01
SIR4YDR227W MDM20Q12387 796 aaKnown RBP2.47□□□□□ -2.01
SIR4YDR227W ISA2Q12425 185 aa2.47□□□□□ -2.01
SIR4YDR227W RPC40P07703 335 aaKnown RBP2.47□□□□□ -2.01
SIR4YDR227W RPS0AP32905 252 aaKnown RBP2.47□□□□□ -2.01
SIR4YDR227W ILV3P39522 585 aaKnown RBP2.47□□□□□ -2.01
SIR4YDR227W VID30P53076 958 aa2.47□□□□□ -2.01
SIR4YDR227W BNI4P53858 892 aa2.47□□□□□ -2.01
SIR4YDR227W TAP42Q04372 366 aa2.47□□□□□ -2.01
SIR4YDR227W ACK1Q07622 623 aaPredicted RBP2.47□□□□□ -2.01
SIR4YDR227W DBP10Q12389 995 aaKnown RBP2.47□□□□□ -2.01
SIR4YDR227W HCM1P25364 564 aa2.46□□□□□ -2.02
SIR4YDR227W ABD1P32783 436 aaPredicted RBP2.46□□□□□ -2.02
SIR4YDR227W ALD5P40047 520 aaKnown RBP2.46□□□□□ -2.02
SIR4YDR227W DAN4P47179 1161 aa2.46□□□□□ -2.02
SIR4YDR227W ROM1P53046 1155 aa2.46□□□□□ -2.02
SIR4YDR227W YGR117CP53270 476 aa2.46□□□□□ -2.02
SIR4YDR227W BDF2Q07442 638 aa2.46□□□□□ -2.02
SIR4YDR227W APL5Q08951 932 aaKnown RBP2.46□□□□□ -2.02
SIR4YDR227W SUP35P05453 685 aaKnown RBP2.46□□□□□ -2.02
SIR4YDR227W KTR4P38131 464 aa2.46□□□□□ -2.02
SIR4YDR227W XKS1P42826 600 aa2.46□□□□□ -2.02
SIR4YDR227W YJR107WP47145 328 aa2.46□□□□□ -2.02
SIR4YDR227W AIM14P53109 570 aa2.46□□□□□ -2.02
SIR4YDR227W YGR266WP53326 701 aa2.46□□□□□ -2.02
SIR4YDR227W YOL024WQ08172 172 aa2.46□□□□□ -2.02
SIR4YDR227W MCM16Q12262 181 aa2.46□□□□□ -2.02
SIR4YDR227W MAK16P10962 306 aaPredicted RBP2.46□□□□□ -2.02
SIR4YDR227W MNE1P24720 663 aa2.46□□□□□ -2.02
SIR4YDR227W PEP3P27801 918 aa2.46□□□□□ -2.02
SIR4YDR227W NPR3P38742 1146 aa2.46□□□□□ -2.02
SIR4YDR227W UBP12P39538 1254 aa2.46□□□□□ -2.02
SIR4YDR227W FET4P40988 552 aa2.46□□□□□ -2.02
SIR4YDR227W ESC8Q08119 714 aa2.46□□□□□ -2.02
SIR4YDR227W NTG2Q08214 380 aa2.46□□□□□ -2.02
SIR4YDR227W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
SIR4YDR227W RAV1P47104 1357 aa2.45□□□□□ -2.02
SIR4YDR227W CDC19P00549 500 aaKnown RBP2.45□□□□□ -2.02
SIR4YDR227W PHR1P05066 565 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
SIR4YDR227W PTH2P34222 208 aa2.45□□□□□ -2.02
SIR4YDR227W MRPL7P36519 292 aa2.45□□□□□ -2.02
SIR4YDR227W POA1P38218 177 aa2.45□□□□□ -2.02
SIR4YDR227W ITC1P53125 1264 aa2.45□□□□□ -2.02
SIR4YDR227W DOS2P54858 310 aa2.45□□□□□ -2.02
SIR4YDR227W SDH5Q08230 162 aa2.45□□□□□ -2.02
SIR4YDR227W GYP1Q08484 637 aa2.45□□□□□ -2.02
SIR4YDR227W YOR378WQ08902 515 aa2.45□□□□□ -2.02
SIR4YDR227W LPD1P09624 499 aaKnown RBP2.45□□□□□ -2.02
SIR4YDR227W RPS8AP0CX39 200 aaKnown RBP2.45□□□□□ -2.02
SIR4YDR227W RPS8BP0CX40 200 aaKnown RBP2.45□□□□□ -2.02
SIR4YDR227W HAP4P14064 554 aa2.45□□□□□ -2.02
SIR4YDR227W IMG2P25642 146 aaPredicted RBP2.45□□□□□ -2.02
SIR4YDR227W UGA3P26370 528 aa2.45□□□□□ -2.02
SIR4YDR227W CDC11P32458 415 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms