RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C RKM2Q03942 479 aa7□□□□□ -1.29
MSS116YDR194C YTM1Q12024 460 aaPredicted RBP7□□□□□ -1.29
MSS116YDR194C GNT1Q12096 491 aa7□□□□□ -1.29
MSS116YDR194C APA1P16550 321 aaKnown RBP7□□□□□ -1.29
MSS116YDR194C AEP2P22136 580 aa7□□□□□ -1.29
MSS116YDR194C PTH2P34222 208 aa7□□□□□ -1.29
MSS116YDR194C ALG3P38179 458 aa7□□□□□ -1.29
MSS116YDR194C RGD1P38339 666 aa7□□□□□ -1.29
MSS116YDR194C CKB2P38930 258 aa7□□□□□ -1.29
MSS116YDR194C MSB3P48566 633 aaPredicted RBP7□□□□□ -1.29
MSS116YDR194C RRI2Q12348 645 aa7□□□□□ -1.29
MSS116YDR194C SSH4P32343 579 aa6.99□□□□□ -1.29
MSS116YDR194C SCT1P32784 759 aa6.99□□□□□ -1.29
MSS116YDR194C GPP2P40106 250 aaKnown RBP6.99□□□□□ -1.29
MSS116YDR194C RPT2P40327 437 aaKnown RBP6.99□□□□□ -1.29
MSS116YDR194C UTP22P53254 1237 aaPredicted RBP6.99□□□□□ -1.29
MSS116YDR194C DUS3Q06053 668 aaKnown RBP6.99□□□□□ -1.29
MSS116YDR194C MLC2Q06580 163 aa6.99□□□□□ -1.29
MSS116YDR194C PCM1P38628 557 aaKnown RBP6.99□□□□□ -1.29
MSS116YDR194C RIM4P38741 713 aa6.99□□□□□ -1.29
MSS116YDR194C FET4P40988 552 aa6.99□□□□□ -1.29
MSS116YDR194C CLA4P48562 842 aa6.99□□□□□ -1.29
MSS116YDR194C KCC4P25389 1037 aa6.98□□□□□ -1.29
MSS116YDR194C NFU1P32860 256 aa6.98□□□□□ -1.29
MSS116YDR194C ERT1P38140 529 aa6.98□□□□□ -1.29
MSS116YDR194C HOS4P40480 1083 aa6.98□□□□□ -1.29
MSS116YDR194C CAF16P43569 289 aa6.98□□□□□ -1.29
MSS116YDR194C SNP1Q00916 300 aaPredicted RBP6.98□□□□□ -1.29
MSS116YDR194C GUD1Q07729 489 aa6.98□□□□□ -1.29
MSS116YDR194C PSR2Q07949 397 aa6.98□□□□□ -1.29
MSS116YDR194C SOG2Q08817 791 aa6.98□□□□□ -1.29
MSS116YDR194C PPH3P32345 308 aa6.97□□□□□ -1.29
MSS116YDR194C DAL3P32459 195 aa6.97□□□□□ -1.29
MSS116YDR194C AFR1P33304 620 aa6.97□□□□□ -1.29
MSS116YDR194C YHL041WP38730 149 aa6.97□□□□□ -1.29
MSS116YDR194C GZF3P42944 551 aaKnown RBP6.97□□□□□ -1.29
MSS116YDR194C GYP8P43570 497 aa6.97□□□□□ -1.29
MSS116YDR194C PTK2P47116 818 aaKnown RBP6.97□□□□□ -1.29
MSS116YDR194C MDM1Q01846 1127 aa6.97□□□□□ -1.29
MSS116YDR194C LCD1Q04377 747 aa6.97□□□□□ -1.29
MSS116YDR194C YIG1Q08956 461 aa6.97□□□□□ -1.29
MSS116YDR194C RET1P22276 1149 aaKnown RBP6.97□□□□□ -1.29
MSS116YDR194C YKL133CP36066 463 aa6.97□□□□□ -1.29
MSS116YDR194C MRPL16P38064 232 aa6.97□□□□□ -1.29
MSS116YDR194C PNT1P38969 423 aa6.97□□□□□ -1.29
MSS116YDR194C IES1P43579 692 aa6.97□□□□□ -1.29
MSS116YDR194C UBP15P50101 1230 aa6.97□□□□□ -1.29
MSS116YDR194C SPP382Q06411 708 aaPredicted RBP6.97□□□□□ -1.29
MSS116YDR194C ERP4Q12450 207 aa6.97□□□□□ -1.29
MSS116YDR194C KTR4P38131 464 aa6.96□□□□□ -1.3
MSS116YDR194C YGR283CP53336 341 aaPredicted RBP6.96□□□□□ -1.3
MSS116YDR194C YNR063WP53749 607 aa6.96□□□□□ -1.3
MSS116YDR194C YML131WQ03102 365 aa6.96□□□□□ -1.3
MSS116YDR194C DBF20P32328 564 aa6.95□□□□□ -1.3
MSS116YDR194C YRO2P38079 344 aa6.95□□□□□ -1.3
MSS116YDR194C TOK1P40310 691 aa6.95□□□□□ -1.3
MSS116YDR194C YJR098CP47139 656 aa6.95□□□□□ -1.3
MSS116YDR194C COG8Q04632 607 aa6.95□□□□□ -1.3
MSS116YDR194C RSC3Q06639 885 aa6.95□□□□□ -1.3
MSS116YDR194C PTC5Q12511 572 aa6.95□□□□□ -1.3
MSS116YDR194C MRP10O75012 95 aa6.95□□□□□ -1.3
MSS116YDR194C ADE8P04161 214 aa6.95□□□□□ -1.3
MSS116YDR194C YER152CP10356 443 aa6.95□□□□□ -1.3
MSS116YDR194C HSC82P15108 705 aaKnown RBP6.95□□□□□ -1.3
MSS116YDR194C STO1P34160 861 aaKnown RBP6.95□□□□□ -1.3
MSS116YDR194C ARL1P38116 183 aaKnown RBP6.95□□□□□ -1.3
MSS116YDR194C YAP1801P38856 637 aa6.95□□□□□ -1.3
MSS116YDR194C HAS1Q03532 505 aaKnown RBP6.95□□□□□ -1.3
MSS116YDR194C PHM6Q05637 104 aa6.95□□□□□ -1.3
MSS116YDR194C ATG33Q06485 197 aa6.95□□□□□ -1.3
MSS116YDR194C DBP2P24783 546 aaKnown RBP6.94□□□□□ -1.3
MSS116YDR194C HIS6P40545 261 aa6.94□□□□□ -1.3
MSS116YDR194C AIM14P53109 570 aa6.94□□□□□ -1.3
MSS116YDR194C AFT1P22149 690 aa6.93□□□□□ -1.3
MSS116YDR194C HEM12P32347 362 aaPredicted RBP6.93□□□□□ -1.3
MSS116YDR194C MCD4P36051 919 aa6.93□□□□□ -1.3
MSS116YDR194C YBR238CP38330 731 aaKnown RBP6.93□□□□□ -1.3
MSS116YDR194C MNN11P46985 422 aaKnown RBP6.93□□□□□ -1.3
MSS116YDR194C ATP25Q03153 612 aa6.93□□□□□ -1.3
MSS116YDR194C RMP1Q12530 201 aa6.93□□□□□ -1.3
MSS116YDR194C CDC4P07834 779 aa6.93□□□□□ -1.3
MSS116YDR194C HMG1P12683 1054 aa6.93□□□□□ -1.3
MSS116YDR194C SPO74P45819 413 aa6.93□□□□□ -1.3
MSS116YDR194C PAP2P53632 584 aaKnown RBP6.93□□□□□ -1.3
MSS116YDR194C BMT6Q12291 365 aa6.93□□□□□ -1.3
MSS116YDR194C YOL087CQ99247 1116 aa6.93□□□□□ -1.3
MSS116YDR194C NPP1P25353 742 aa6.92□□□□□ -1.3
MSS116YDR194C CDC12P32468 407 aaKnown RBP6.92□□□□□ -1.3
MSS116YDR194C ATG14P38270 344 aa6.92□□□□□ -1.3
MSS116YDR194C BIT2P38346 545 aa6.92□□□□□ -1.3
MSS116YDR194C SAP185P40856 1058 aa6.92□□□□□ -1.3
MSS116YDR194C HEH2Q03281 663 aa6.92□□□□□ -1.3
MSS116YDR194C RPL11AP0C0W9 174 aaKnown RBP6.91□□□□□ -1.3
MSS116YDR194C GFD2P25370 566 aaKnown RBP6.91□□□□□ -1.3
MSS116YDR194C HOG1P32485 435 aa6.91□□□□□ -1.3
MSS116YDR194C ASH1P34233 588 aa6.91□□□□□ -1.3
MSS116YDR194C TAF1P46677 1066 aa6.91□□□□□ -1.3
MSS116YDR194C YDR338CQ05497 695 aa6.91□□□□□ -1.3
MSS116YDR194C RPL11BQ3E757 174 aaPredicted RBP6.91□□□□□ -1.3
MSS116YDR194C RPP1AP05318 106 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms