RNA–Protein interactions for RNA: YDR174W

HMO1, Transcript of Chromatin associated high mobility group (HMG) family member, yeast

Gene HMO1, Length 741 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMO1	YDR174W	TAT2	P38967	592 aa		4.98	□□□□□ -1.61
HMO1	YDR174W	RRT14	P40470	206 aa		4.98	□□□□□ -1.61
HMO1	YDR174W	MTC3	P53077	123 aa		4.98	□□□□□ -1.61
HMO1	YDR174W	SNO2	P53823	222 aa		4.98	□□□□□ -1.61
HMO1	YDR174W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
HMO1	YDR174W	SIZ1	Q04195	904 aa		4.98	□□□□□ -1.61
HMO1	YDR174W	HRQ1	Q05549	1077 aa		4.98	□□□□□ -1.61
HMO1	YDR174W	TDA5	Q06417	326 aa	Known RBP	4.98	□□□□□ -1.61
HMO1	YDR174W	STE5	P32917	917 aa		4.97	□□□□□ -1.61
HMO1	YDR174W	MRP8	P35719	219 aa		4.97	□□□□□ -1.61
HMO1	YDR174W	IRC24	P40580	263 aa		4.97	□□□□□ -1.61
HMO1	YDR174W	CYC1	P00044	109 aa	Predicted RBP	4.96	□□□□□ -1.62
HMO1	YDR174W	SRM1	P21827	482 aa		4.96	□□□□□ -1.62
HMO1	YDR174W	HFM1	P51979	1187 aa		4.96	□□□□□ -1.62
HMO1	YDR174W	RSM24	Q03976	319 aa		4.96	□□□□□ -1.62
HMO1	YDR174W	WRS1	Q12109	432 aa	Known RBP	4.96	□□□□□ -1.62
HMO1	YDR174W	YLL058W	Q12198	575 aa		4.96	□□□□□ -1.62
HMO1	YDR174W	CDC12	P32468	407 aa	Known RBP	4.95	□□□□□ -1.62
HMO1	YDR174W	PBY1	P38254	753 aa		4.95	□□□□□ -1.62
HMO1	YDR174W	IRR1	P40541	1150 aa		4.95	□□□□□ -1.62
HMO1	YDR174W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
HMO1	YDR174W	YDR132C	Q03900	495 aa		4.95	□□□□□ -1.62
HMO1	YDR174W	SGD1	Q06132	899 aa		4.95	□□□□□ -1.62
HMO1	YDR174W	KIN2	P13186	1147 aa	Known RBP	4.94	□□□□□ -1.62
HMO1	YDR174W	CMP2	P14747	604 aa		4.94	□□□□□ -1.62
HMO1	YDR174W	PRP6	P19735	899 aa	Predicted RBP	4.94	□□□□□ -1.62
HMO1	YDR174W	GRX1	P25373	110 aa	Known RBP	4.94	□□□□□ -1.62
HMO1	YDR174W	APL1	P27351	700 aa		4.94	□□□□□ -1.62
HMO1	YDR174W	AIM3	P38266	947 aa	Known RBP	4.94	□□□□□ -1.62
HMO1	YDR174W	YBR184W	P38299	523 aa		4.94	□□□□□ -1.62
HMO1	YDR174W	PFD1	P46988	109 aa		4.94	□□□□□ -1.62
HMO1	YDR174W	MSC2	Q03455	724 aa		4.94	□□□□□ -1.62
HMO1	YDR174W	MDM38	Q08179	573 aa		4.94	□□□□□ -1.62
HMO1	YDR174W	SOD2	P00447	233 aa		4.93	□□□□□ -1.62
HMO1	YDR174W	GAL10	P04397	699 aa		4.93	□□□□□ -1.62
HMO1	YDR174W	THI80	P35202	319 aa		4.93	□□□□□ -1.62
HMO1	YDR174W	GIC1	P38785	314 aa		4.93	□□□□□ -1.62
HMO1	YDR174W	LAM1	P38851	1228 aa		4.93	□□□□□ -1.62
HMO1	YDR174W	RIM8	P53179	542 aa		4.93	□□□□□ -1.62
HMO1	YDR174W	PLB2	Q03674	706 aa		4.93	□□□□□ -1.62
HMO1	YDR174W	XYL2	Q07993	356 aa		4.93	□□□□□ -1.62
HMO1	YDR174W	RPS13	P05756	151 aa	Known RBP	4.92	□□□□□ -1.62
HMO1	YDR174W	MEF2	P39677	819 aa		4.92	□□□□□ -1.62
HMO1	YDR174W	NAN1	Q02931	896 aa	Known RBP	4.92	□□□□□ -1.62
HMO1	YDR174W	SRT1	Q03175	343 aa		4.92	□□□□□ -1.62
HMO1	YDR174W	DUS3	Q06053	668 aa	Known RBP	4.92	□□□□□ -1.62
HMO1	YDR174W	FMP25	Q08023	583 aa		4.92	□□□□□ -1.62
HMO1	YDR174W	YPL277C	Q08989	487 aa		4.92	□□□□□ -1.62
HMO1	YDR174W	FUN30	P31380	1131 aa		4.91	□□□□□ -1.62
HMO1	YDR174W	YAP1801	P38856	637 aa		4.91	□□□□□ -1.62
HMO1	YDR174W	UBP5	P39944	805 aa		4.91	□□□□□ -1.62
HMO1	YDR174W	SAH1	P39954	449 aa	Known RBP	4.91	□□□□□ -1.62
HMO1	YDR174W	NPP2	P39997	493 aa		4.91	□□□□□ -1.62
HMO1	YDR174W	SRP1	Q02821	542 aa	Known RBP	4.91	□□□□□ -1.62
HMO1	YDR174W	GCN5	Q03330	439 aa		4.91	□□□□□ -1.62
HMO1	YDR174W	ROT1	Q03691	256 aa		4.91	□□□□□ -1.62
HMO1	YDR174W	DUS4	Q06063	367 aa		4.91	□□□□□ -1.62
HMO1	YDR174W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
HMO1	YDR174W	HBS1	P32769	611 aa	Known RBP	4.9	□□□□□ -1.63
HMO1	YDR174W	YJL049W	P47048	450 aa		4.9	□□□□□ -1.63
HMO1	YDR174W	YDR306C	Q06640	478 aa		4.9	□□□□□ -1.63
HMO1	YDR174W	YOR352W	Q08816	343 aa		4.9	□□□□□ -1.63
HMO1	YDR174W	OSW2	Q12202	724 aa		4.9	□□□□□ -1.63
HMO1	YDR174W	CDC6	P09119	513 aa		4.89	□□□□□ -1.63
HMO1	YDR174W	RAD4	P14736	754 aa		4.89	□□□□□ -1.63
HMO1	YDR174W	PRP9	P19736	530 aa	Known RBP	4.89	□□□□□ -1.63
HMO1	YDR174W	AFR1	P33304	620 aa		4.89	□□□□□ -1.63
HMO1	YDR174W	SIT1	P39980	628 aa		4.89	□□□□□ -1.63
HMO1	YDR174W	RPL8B	P29453	256 aa	Known RBP	4.88	□□□□□ -1.63
HMO1	YDR174W	ECM21	P38167	1117 aa	Known RBP	4.88	□□□□□ -1.63
HMO1	YDR174W	MND2	P40577	368 aa		4.88	□□□□□ -1.63
HMO1	YDR174W	GYP7	P48365	746 aa		4.88	□□□□□ -1.63
HMO1	YDR174W	UTP8	P53276	713 aa	Known RBP	4.88	□□□□□ -1.63
HMO1	YDR174W	NPP1	P25353	742 aa		4.87	□□□□□ -1.63
HMO1	YDR174W	PPH3	P32345	308 aa		4.87	□□□□□ -1.63
HMO1	YDR174W	AAR2	P32357	355 aa	Predicted RBP	4.87	□□□□□ -1.63
HMO1	YDR174W	DOM34	P33309	386 aa		4.87	□□□□□ -1.63
HMO1	YDR174W	TOD6	P34219	525 aa		4.87	□□□□□ -1.63
HMO1	YDR174W	YKR078W	P36158	585 aa	Known RBP	4.87	□□□□□ -1.63
HMO1	YDR174W	TSL1	P38427	1098 aa	Known RBP	4.87	□□□□□ -1.63
HMO1	YDR174W	SPT20	P50875	604 aa		4.87	□□□□□ -1.63
HMO1	YDR174W	SFB2	P53953	876 aa		4.87	□□□□□ -1.63
HMO1	YDR174W	BUL2	Q03758	920 aa	Known RBP	4.87	□□□□□ -1.63
HMO1	YDR174W	CDA1	Q06702	301 aa		4.87	□□□□□ -1.63
HMO1	YDR174W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
HMO1	YDR174W	RPC82	P32349	654 aa		4.86	□□□□□ -1.63
HMO1	YDR174W	YBR238C	P38330	731 aa	Known RBP	4.86	□□□□□ -1.63
HMO1	YDR174W	YHR020W	P38708	688 aa	Known RBP	4.86	□□□□□ -1.63
HMO1	YDR174W	ZRG8	P40021	1076 aa		4.86	□□□□□ -1.63
HMO1	YDR174W	YER158C	P40095	573 aa		4.86	□□□□□ -1.63
HMO1	YDR174W	ALR2	P43553	858 aa		4.86	□□□□□ -1.63
HMO1	YDR174W	NNF1	P47149	201 aa		4.86	□□□□□ -1.63
HMO1	YDR174W	YKE2	P52553	114 aa		4.86	□□□□□ -1.63
HMO1	YDR174W	ERP6	P53198	216 aa		4.86	□□□□□ -1.63
HMO1	YDR174W	TPO2	P53283	614 aa		4.86	□□□□□ -1.63
HMO1	YDR174W	VPS62	P53285	467 aa		4.86	□□□□□ -1.63
HMO1	YDR174W	PBP1	P53297	722 aa	Known RBP	4.86	□□□□□ -1.63
HMO1	YDR174W	ADY3	Q07732	790 aa		4.86	□□□□□ -1.63
HMO1	YDR174W	SPO75	Q07798	868 aa		4.86	□□□□□ -1.63
HMO1	YDR174W	GPB1	Q08886	897 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 98.5 ms