RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	UGA2	P38067	497 aa		7.85	□□□□□ -1.15
SIR2	YDL042C	YPL034W	Q03083	165 aa		7.85	□□□□□ -1.15
SIR2	YDL042C	PUS1	Q12211	544 aa	Known RBP	7.85	□□□□□ -1.15
SIR2	YDL042C	ERR1	P0CX10	437 aa		7.84	□□□□□ -1.15
SIR2	YDL042C	ERR2	P0CX11	437 aa		7.84	□□□□□ -1.15
SIR2	YDL042C	SAM35	P14693	329 aa		7.84	□□□□□ -1.15
SIR2	YDL042C	SNF5	P18480	905 aa		7.84	□□□□□ -1.15
SIR2	YDL042C	RCL1	Q08096	367 aa	Predicted RBP	7.84	□□□□□ -1.15
SIR2	YDL042C	PPH3	P32345	308 aa		7.83	□□□□□ -1.16
SIR2	YDL042C	SLA2	P33338	968 aa		7.83	□□□□□ -1.16
SIR2	YDL042C	CCZ1	P38273	704 aa		7.83	□□□□□ -1.16
SIR2	YDL042C	SRP1	Q02821	542 aa	Known RBP	7.83	□□□□□ -1.16
SIR2	YDL042C	HBN1	Q96VH4	193 aa		7.83	□□□□□ -1.16
SIR2	YDL042C	SRO9	P25567	434 aa	Known RBP	7.83	□□□□□ -1.16
SIR2	YDL042C	SCT1	P32784	759 aa		7.83	□□□□□ -1.16
SIR2	YDL042C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	7.83	□□□□□ -1.16	not detected
SIR2	YDL042C	MSB1	P21339	1137 aa	Known RBP	7.82	□□□□□ -1.16
SIR2	YDL042C	MDL2	P33311	773 aa		7.82	□□□□□ -1.16
SIR2	YDL042C	YBR284W	P38150	797 aa		7.82	□□□□□ -1.16
SIR2	YDL042C	RTA1	P53047	317 aa		7.82	□□□□□ -1.16
SIR2	YDL042C	PRO1	P32264	428 aa		7.81	□□□□□ -1.16
SIR2	YDL042C	THI4	P32318	326 aa		7.81	□□□□□ -1.16
SIR2	YDL042C	BET3	P36149	193 aa		7.81	□□□□□ -1.16
SIR2	YDL042C	PIK1	P39104	1066 aa		7.81	□□□□□ -1.16
SIR2	YDL042C	SIT1	P39980	628 aa		7.81	□□□□□ -1.16
SIR2	YDL042C	OYE3	P41816	400 aa	Predicted RBP	7.81	□□□□□ -1.16
SIR2	YDL042C	YLR122C	Q12312	125 aa		7.81	□□□□□ -1.16
SIR2	YDL042C	THS1	P04801	734 aa	Known RBP	7.8	□□□□□ -1.16
SIR2	YDL042C	SAH1	P39954	449 aa	Known RBP	7.8	□□□□□ -1.16
SIR2	YDL042C	NBA1	Q08229	501 aa	Known RBP	7.8	□□□□□ -1.16
SIR2	YDL042C	TRE1	Q08919	783 aa		7.8	□□□□□ -1.16
SIR2	YDL042C	ADE8	P04161	214 aa		7.79	□□□□□ -1.16
SIR2	YDL042C	KAE1	P36132	386 aa		7.79	□□□□□ -1.16
SIR2	YDL042C	NSI1	Q12457	570 aa		7.79	□□□□□ -1.16
SIR2	YDL042C	CDC12	P32468	407 aa	Known RBP	7.79	□□□□□ -1.16
SIR2	YDL042C	HRQ1	Q05549	1077 aa		7.79	□□□□□ -1.16
SIR2	YDL042C	RSB1	Q08417	382 aa		7.79	□□□□□ -1.16
SIR2	YDL042C	YPR071W	Q12346	211 aa		7.79	□□□□□ -1.16
SIR2	YDL042C	TOP3	P13099	656 aa		7.78	□□□□□ -1.16
SIR2	YDL042C	YKL151C	P36059	337 aa		7.78	□□□□□ -1.16
SIR2	YDL042C	FPR3	P38911	411 aa	Known RBP	7.78	□□□□□ -1.16
SIR2	YDL042C	PEX7	P39108	375 aa		7.78	□□□□□ -1.16
SIR2	YDL042C	RSC58	Q07979	502 aa		7.78	□□□□□ -1.16
SIR2	YDL042C	BI4	P03879	638 aa		7.77	□□□□□ -1.17
SIR2	YDL042C	YRO2	P38079	344 aa		7.77	□□□□□ -1.17
SIR2	YDL042C	YGR130C	P53278	816 aa		7.77	□□□□□ -1.17
SIR2	YDL042C	POB3	Q04636	552 aa	Known RBP	7.77	□□□□□ -1.17
SIR2	YDL042C	TOM70	P07213	617 aa	Known RBP	7.76	□□□□□ -1.17
SIR2	YDL042C	DOM34	P33309	386 aa		7.76	□□□□□ -1.17
SIR2	YDL042C	PET10	P36139	283 aa		7.76	□□□□□ -1.17
SIR2	YDL042C	MNN1	P39106	762 aa		7.76	□□□□□ -1.17
SIR2	YDL042C	YLL058W	Q12198	575 aa		7.76	□□□□□ -1.17
SIR2	YDL042C	MSD1	P15179	658 aa	Known RBP	7.75	□□□□□ -1.17
SIR2	YDL042C	PTC7	P38797	343 aa		7.75	□□□□□ -1.17
SIR2	YDL042C	UBP6	P43593	499 aa	Known RBP	7.75	□□□□□ -1.17
SIR2	YDL042C	HSV2	P50079	448 aa	Predicted RBP	7.75	□□□□□ -1.17
SIR2	YDL042C	LCD1	Q04377	747 aa		7.75	□□□□□ -1.17
SIR2	YDL042C	AIM26	P32858	118 aa		7.74	□□□□□ -1.17
SIR2	YDL042C	GTS1	P40956	396 aa		7.74	□□□□□ -1.17
SIR2	YDL042C	MDM38	Q08179	573 aa		7.74	□□□□□ -1.17
SIR2	YDL042C	RRT14	P40470	206 aa		7.73	□□□□□ -1.17
SIR2	YDL042C	CCT8	P47079	568 aa	Known RBP	7.73	□□□□□ -1.17
SIR2	YDL042C	ACE2	P21192	770 aa		7.73	□□□□□ -1.17
SIR2	YDL042C	AFR1	P33304	620 aa		7.73	□□□□□ -1.17
SIR2	YDL042C	GDH3	P39708	457 aa		7.73	□□□□□ -1.17
SIR2	YDL042C	MTC3	P53077	123 aa		7.73	□□□□□ -1.17
SIR2	YDL042C	SSY1	Q03770	852 aa		7.73	□□□□□ -1.17
SIR2	YDL042C	ATG13	Q06628	738 aa		7.73	□□□□□ -1.17
SIR2	YDL042C	CYC7	P00045	113 aa		7.72	□□□□□ -1.17
SIR2	YDL042C	GCD1	P09032	578 aa	Predicted RBP	7.72	□□□□□ -1.17
SIR2	YDL042C	MSH2	P25847	964 aa		7.72	□□□□□ -1.17
SIR2	YDL042C	BUL2	Q03758	920 aa	Known RBP	7.72	□□□□□ -1.17
SIR2	YDL042C	SVS1	Q12254	260 aa		7.72	□□□□□ -1.17
SIR2	YDL042C	NPP1	P25353	742 aa		7.71	□□□□□ -1.18
SIR2	YDL042C	UTP14	Q04500	899 aa	Known RBP	7.71	□□□□□ -1.18
SIR2	YDL042C	SPS1	P08458	490 aa		7.7	□□□□□ -1.18
SIR2	YDL042C	ADP1	P25371	1049 aa		7.7	□□□□□ -1.18
SIR2	YDL042C	TOK1	P40310	691 aa		7.7	□□□□□ -1.18
SIR2	YDL042C	CCM1	P48237	864 aa	Predicted RBP	7.7	□□□□□ -1.18
SIR2	YDL042C	SRT1	Q03175	343 aa		7.7	□□□□□ -1.18
SIR2	YDL042C	REC104	P33323	182 aa		7.7	□□□□□ -1.18
SIR2	YDL042C	ERT1	P38140	529 aa		7.7	□□□□□ -1.18
SIR2	YDL042C	MAL11	P53048	616 aa		7.7	□□□□□ -1.18
SIR2	YDL042C	TRP3	P00937	484 aa		7.69	□□□□□ -1.18
SIR2	YDL042C	YKR078W	P36158	585 aa	Known RBP	7.69	□□□□□ -1.18
SIR2	YDL042C	TSL1	P38427	1098 aa	Known RBP	7.69	□□□□□ -1.18
SIR2	YDL042C	GIC1	P38785	314 aa		7.69	□□□□□ -1.18
SIR2	YDL042C	GYP7	P48365	746 aa		7.69	□□□□□ -1.18
SIR2	YDL042C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	7.69	□□□□□ -1.18	not detected
SIR2	YDL042C	MTC5	Q03897	1148 aa		7.69	□□□□□ -1.18
SIR2	YDL042C	RFC5	P38251	354 aa		7.68	□□□□□ -1.18
SIR2	YDL042C	SEC26	P41810	973 aa	Known RBP	7.68	□□□□□ -1.18
SIR2	YDL042C	SDH1	Q00711	640 aa		7.68	□□□□□ -1.18
SIR2	YDL042C	ALG2	P43636	503 aa		7.67	□□□□□ -1.18
SIR2	YDL042C	UGO1	Q03327	502 aa		7.67	□□□□□ -1.18
SIR2	YDL042C	NTG2	Q08214	380 aa		7.67	□□□□□ -1.18
SIR2	YDL042C	MED7	Q08278	222 aa		7.67	□□□□□ -1.18
SIR2	YDL042C	OSW2	Q12202	724 aa		7.67	□□□□□ -1.18
SIR2	YDL042C	YGR161W-C	Q3E744	92 aa		7.67	□□□□□ -1.18
SIR2	YDL042C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	7.67	□□□□□ -1.18	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms