RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C NAM8Q00539 523 aaKnown RBP1.74□□□□□ -2.13
MSH3YCR092C TRM44Q02648 567 aaKnown RBP1.74□□□□□ -2.13
MSH3YCR092C IRC4Q03036 179 aa1.74□□□□□ -2.13
MSH3YCR092C UBX5Q06682 500 aa1.74□□□□□ -2.13
MSH3YCR092C TAH18Q12181 623 aa1.74□□□□□ -2.13
MSH3YCR092C MAK16P10962 306 aaPredicted RBP1.74□□□□□ -2.13
MSH3YCR092C DPH2P32461 534 aa1.74□□□□□ -2.13
MSH3YCR092C UGA4P32837 571 aa1.74□□□□□ -2.13
MSH3YCR092C BOI1P38041 980 aaKnown RBP1.74□□□□□ -2.13
MSH3YCR092C RFC1P38630 861 aaKnown RBP1.74□□□□□ -2.13
MSH3YCR092C SFB3P38810 929 aa1.74□□□□□ -2.13
MSH3YCR092C FAA4P47912 694 aaKnown RBP1.74□□□□□ -2.13
MSH3YCR092C ENP2P48234 707 aaKnown RBP1.74□□□□□ -2.13
MSH3YCR092C RTS3P53289 263 aa1.74□□□□□ -2.13
MSH3YCR092C ORC1P54784 914 aaPredicted RBP1.74□□□□□ -2.13
MSH3YCR092C PTA1Q01329 785 aaPredicted RBP1.74□□□□□ -2.13
MSH3YCR092C YDR341CQ05506 607 aaKnown RBP1.74□□□□□ -2.13
MSH3YCR092C THI22Q06490 572 aa1.74□□□□□ -2.13
MSH3YCR092C RPL22AP05749 121 aaKnown RBP1.73□□□□□ -2.13
MSH3YCR092C ATP1P07251 545 aaKnown RBP1.73□□□□□ -2.13
MSH3YCR092C MET4P32389 672 aa1.73□□□□□ -2.13
MSH3YCR092C TFC4P33339 1025 aa1.73□□□□□ -2.13
MSH3YCR092C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
MSH3YCR092C MCD4P36051 919 aa1.73□□□□□ -2.13
MSH3YCR092C UIP5P36137 443 aa1.73□□□□□ -2.13
MSH3YCR092C YHR131CP38835 850 aa1.73□□□□□ -2.13
MSH3YCR092C ACA1P39970 489 aa1.73□□□□□ -2.13
MSH3YCR092C JHD1P40034 492 aa1.73□□□□□ -2.13
MSH3YCR092C MRX6P48564 524 aa1.73□□□□□ -2.13
MSH3YCR092C PIP2P52960 996 aa1.73□□□□□ -2.13
MSH3YCR092C MET13P53128 600 aa1.73□□□□□ -2.13
MSH3YCR092C MLC1P53141 149 aa1.73□□□□□ -2.13
MSH3YCR092C ISU1Q03020 165 aa1.73□□□□□ -2.13
MSH3YCR092C THI3Q07471 609 aa1.73□□□□□ -2.13
MSH3YCR092C DAL1P32375 460 aa1.73□□□□□ -2.13
MSH3YCR092C HMT1P38074 348 aa1.73□□□□□ -2.13
MSH3YCR092C SLX1P38324 304 aa1.73□□□□□ -2.13
MSH3YCR092C YJR107WP47145 328 aa1.73□□□□□ -2.13
MSH3YCR092C CNM67P53865 581 aaKnown RBP1.73□□□□□ -2.13
MSH3YCR092C NAF1P53919 492 aaKnown RBP1.73□□□□□ -2.13
MSH3YCR092C GYL1Q04322 720 aa1.73□□□□□ -2.13
MSH3YCR092C YLR422WQ06409 1932 aa1.73□□□□□ -2.13
MSH3YCR092C VMA2P16140 517 aaKnown RBP1.72□□□□□ -2.13
MSH3YCR092C PFK2P16862 959 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
MSH3YCR092C VAN1P23642 535 aa1.72□□□□□ -2.13
MSH3YCR092C TYE7P33122 291 aaPredicted RBP1.72□□□□□ -2.13
MSH3YCR092C CCT3P39077 534 aaKnown RBP1.72□□□□□ -2.13
MSH3YCR092C MTO1P53070 669 aa1.72□□□□□ -2.13
MSH3YCR092C SHE10P53075 577 aa1.72□□□□□ -2.13
MSH3YCR092C LIF1P53150 421 aa1.72□□□□□ -2.13
MSH3YCR092C UTP14Q04500 899 aaKnown RBP1.72□□□□□ -2.13
MSH3YCR092C FUS2Q05670 677 aa1.72□□□□□ -2.13
MSH3YCR092C SGD1Q06132 899 aa1.72□□□□□ -2.13
MSH3YCR092C ECM7Q06200 448 aa1.72□□□□□ -2.13
MSH3YCR092C TOS4Q06266 489 aa1.72□□□□□ -2.13
MSH3YCR092C VIP1Q06685 1146 aaKnown RBP1.72□□□□□ -2.13
MSH3YCR092C POX1P13711 748 aa1.72□□□□□ -2.13
MSH3YCR092C ISF1P32488 338 aa1.72□□□□□ -2.13
MSH3YCR092C OMA1P36163 345 aa1.72□□□□□ -2.13
MSH3YCR092C NCL1P38205 684 aaKnown RBP1.72□□□□□ -2.13
MSH3YCR092C CRG1P38892 291 aaRIP-Chip data1.72□□□□□ -2.13not detected
MSH3YCR092C ATG1P53104 897 aa1.72□□□□□ -2.13
MSH3YCR092C ENV11P53246 860 aa1.72□□□□□ -2.13
MSH3YCR092C RPT4P53549 437 aaKnown RBP1.72□□□□□ -2.13
MSH3YCR092C GDE1Q02979 1223 aa1.72□□□□□ -2.13
MSH3YCR092C YDL073WQ07454 984 aa1.72□□□□□ -2.13
MSH3YCR092C FRA1Q07825 749 aa1.72□□□□□ -2.13
MSH3YCR092C TRM11Q12463 433 aa1.72□□□□□ -2.13
MSH3YCR092C MPD2Q99316 277 aa1.72□□□□□ -2.13
MSH3YCR092C PRI2P20457 528 aa1.72□□□□□ -2.13
MSH3YCR092C YDJ1P25491 409 aaKnown RBP1.72□□□□□ -2.13
MSH3YCR092C CYS3P31373 394 aaKnown RBP1.72□□□□□ -2.13
MSH3YCR092C MDJ1P35191 511 aa1.72□□□□□ -2.13
MSH3YCR092C MYO3P36006 1272 aa1.72□□□□□ -2.13
MSH3YCR092C MRPL40P36534 297 aa1.72□□□□□ -2.13
MSH3YCR092C ALG14P38242 237 aa1.72□□□□□ -2.13
MSH3YCR092C TPM2P40414 161 aa1.72□□□□□ -2.13
MSH3YCR092C CUZ1P53899 274 aa1.72□□□□□ -2.13
MSH3YCR092C YNL108CP53929 270 aa1.72□□□□□ -2.13
MSH3YCR092C HEH2Q03281 663 aa1.72□□□□□ -2.13
MSH3YCR092C CSR1Q06705 408 aaKnown RBP1.72□□□□□ -2.13
MSH3YCR092C MRN1Q08925 612 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
MSH3YCR092C HMG2P12684 1045 aa1.71□□□□□ -2.14
MSH3YCR092C ADE2P21264 571 aaKnown RBP1.71□□□□□ -2.14
MSH3YCR092C BCS1P32839 456 aa1.71□□□□□ -2.14
MSH3YCR092C MCR1P36060 302 aaKnown RBP1.71□□□□□ -2.14
MSH3YCR092C SPO22P40511 975 aa1.71□□□□□ -2.14
MSH3YCR092C ERV41Q04651 352 aa1.71□□□□□ -2.14
MSH3YCR092C PHM6Q05637 104 aa1.71□□□□□ -2.14
MSH3YCR092C RTP1Q12751 981 aa1.71□□□□□ -2.14
MSH3YCR092C YMR084WA2P2R3 262 aa1.71□□□□□ -2.14
MSH3YCR092C MBR1P23493 339 aa1.71□□□□□ -2.14
MSH3YCR092C PEP7P32609 515 aa1.71□□□□□ -2.14
MSH3YCR092C DBP7P36120 742 aaKnown RBP1.71□□□□□ -2.14
MSH3YCR092C FMO1P38866 432 aa1.71□□□□□ -2.14
MSH3YCR092C SAH1P39954 449 aaKnown RBP1.71□□□□□ -2.14
MSH3YCR092C YFL066CP43538 392 aa1.71□□□□□ -2.14
MSH3YCR092C UBP15P50101 1230 aa1.71□□□□□ -2.14
MSH3YCR092C YGL082WP53155 381 aa1.71□□□□□ -2.14
MSH3YCR092C SEC5P89102 971 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 86.6 ms