RNA–Protein interactions for RNA: YCR083W

TRX3, Transcript of Mitochondrial thioredoxin, yeast

Gene TRX3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRX3	YCR083W	UBP12	P39538	1254 aa		4.29	□□□□□ -1.72
TRX3	YCR083W	NEO1	P40527	1151 aa		4.29	□□□□□ -1.72
TRX3	YCR083W	YBP2	P53169	641 aa		4.29	□□□□□ -1.72
TRX3	YCR083W	VPS64	Q03944	604 aa		4.29	□□□□□ -1.72
TRX3	YCR083W	VPS20	Q04272	221 aa		4.29	□□□□□ -1.72
TRX3	YCR083W	ATG13	Q06628	738 aa		4.29	□□□□□ -1.72
TRX3	YCR083W	RTT10	Q08924	1013 aa		4.29	□□□□□ -1.72
TRX3	YCR083W	FAL1	Q12099	399 aa	Known RBP	4.29	□□□□□ -1.72
TRX3	YCR083W	ENT1	Q12518	454 aa		4.29	□□□□□ -1.72
TRX3	YCR083W	NOT3	P06102	836 aa	Known RBP	4.28	□□□□□ -1.72
TRX3	YCR083W	LPD1	P09624	499 aa	Known RBP	4.28	□□□□□ -1.72
TRX3	YCR083W	RAD27	P26793	382 aa		4.28	□□□□□ -1.72
TRX3	YCR083W	KNS1	P32350	737 aa	Predicted RBP	4.28	□□□□□ -1.72
TRX3	YCR083W	YKL091C	P33324	310 aa	Known RBP	4.28	□□□□□ -1.72
TRX3	YCR083W	AAP1	P37898	856 aa	Known RBP	4.28	□□□□□ -1.72
TRX3	YCR083W	FET4	P40988	552 aa		4.28	□□□□□ -1.72
TRX3	YCR083W	YGL140C	P53120	1219 aa		4.28	□□□□□ -1.72
TRX3	YCR083W	MLC1	P53141	149 aa		4.28	□□□□□ -1.72
TRX3	YCR083W	BIO5	P53744	561 aa	Known RBP	4.28	□□□□□ -1.72
TRX3	YCR083W	FPR4	Q06205	392 aa	Predicted RBP	4.28	□□□□□ -1.72
TRX3	YCR083W	BRE1	Q07457	700 aa	Known RBP	4.28	□□□□□ -1.72
TRX3	YCR083W	SSP2	Q08646	371 aa		4.28	□□□□□ -1.72
TRX3	YCR083W	YDR461C-A	Q2V2P7	80 aa		4.28	□□□□□ -1.72
TRX3	YCR083W	FAS2	P19097	1887 aa	Known RBP	4.27	□□□□□ -1.73
TRX3	YCR083W	DED1	P06634	604 aa	Known RBP	4.27	□□□□□ -1.73
TRX3	YCR083W	YKL077W	P36081	392 aa		4.27	□□□□□ -1.73
TRX3	YCR083W	AMN1	P38285	549 aa	Predicted RBP	4.27	□□□□□ -1.73
TRX3	YCR083W	BDH2	P39713	417 aa		4.27	□□□□□ -1.73
TRX3	YCR083W	IOC3	P43596	787 aa		4.27	□□□□□ -1.73
TRX3	YCR083W	LYS5	P50113	272 aa		4.27	□□□□□ -1.73
TRX3	YCR083W	MRPS35	P53292	345 aa		4.27	□□□□□ -1.73
TRX3	YCR083W	HST1	P53685	503 aa		4.27	□□□□□ -1.73
TRX3	YCR083W	YNR065C	P53751	1116 aa		4.27	□□□□□ -1.73
TRX3	YCR083W	MDG1	P53885	366 aa		4.27	□□□□□ -1.73
TRX3	YCR083W	TDA5	Q06417	326 aa	Known RBP	4.27	□□□□□ -1.73
TRX3	YCR083W	HDA2	Q06629	674 aa		4.27	□□□□□ -1.73
TRX3	YCR083W	IMH1	Q06704	911 aa	Known RBP	4.27	□□□□□ -1.73
TRX3	YCR083W	SYT1	Q06836	1226 aa		4.27	□□□□□ -1.73
TRX3	YCR083W	CDC53	Q12018	815 aa	Known RBP	4.27	□□□□□ -1.73
TRX3	YCR083W	RIM20	Q12033	661 aa		4.27	□□□□□ -1.73
TRX3	YCR083W	SSK22	P25390	1331 aa	Predicted RBP	4.26	□□□□□ -1.73
TRX3	YCR083W	SAC3	P46674	1301 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.26	□□□□□ -1.73
TRX3	YCR083W	HVG1	P0CE11	249 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	TY1A-DR6	P0CX70	440 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	TY1A-ER1	P0CX71	440 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	TY1A-LR2	P0CX72	440 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	TY1A-PL	P0CX73	440 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	TY1A-JR1	P0CX74	440 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	TY1A-LR3	P0CX75	440 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	TY1A-ML2	P0CX76	440 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	BIK1	P11709	440 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	SEC23	P15303	768 aa	Known RBP	4.26	□□□□□ -1.73
TRX3	YCR083W	BAS1	P22035	811 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	APL2	P36000	726 aa	Predicted RBP	4.26	□□□□□ -1.73
TRX3	YCR083W	YKL069W	P36088	180 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	KTR3	P38130	404 aa	Predicted RBP	4.26	□□□□□ -1.73
TRX3	YCR083W	HYR1	P40581	163 aa	Known RBP	4.26	□□□□□ -1.73
TRX3	YCR083W	YJL049W	P47048	450 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	YGL242C	P53066	181 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	SOK2	P53438	785 aa	Predicted RBP	4.26	□□□□□ -1.73
TRX3	YCR083W	EEB1	Q02891	456 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	NOG1	Q02892	647 aa	Known RBP	4.26	□□□□□ -1.73
TRX3	YCR083W	COG8	Q04632	607 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	HRQ1	Q05549	1077 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	OPI10	Q08202	246 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	SOG2	Q08817	791 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	TY1A-GR1	Q12085	440 aa		4.26	□□□□□ -1.73
TRX3	YCR083W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.26	□□□□□ -1.73
TRX3	YCR083W	TY1A-OL	Q92392	440 aa	Known RBP	4.26	□□□□□ -1.73
TRX3	YCR083W	HTS1	P07263	546 aa	Known RBP	4.25	□□□□□ -1.73
TRX3	YCR083W	GRX1	P25373	110 aa	Known RBP	4.25	□□□□□ -1.73
TRX3	YCR083W	RKM3	P38222	552 aa		4.25	□□□□□ -1.73
TRX3	YCR083W	EXO5	P38289	585 aa		4.25	□□□□□ -1.73
TRX3	YCR083W	ACO2	P39533	789 aa		4.25	□□□□□ -1.73
TRX3	YCR083W	CIR1	P42940	261 aa		4.25	□□□□□ -1.73
TRX3	YCR083W	GNP1	P48813	663 aa		4.25	□□□□□ -1.73
TRX3	YCR083W	YGL081W	P53156	320 aa		4.25	□□□□□ -1.73
TRX3	YCR083W	YGR053C	P53234	283 aa		4.25	□□□□□ -1.73
TRX3	YCR083W	ALO1	P54783	526 aa	Known RBP	4.25	□□□□□ -1.73
TRX3	YCR083W	ROD1	Q02805	837 aa		4.25	□□□□□ -1.73
TRX3	YCR083W	PKH1	Q03407	766 aa		4.25	□□□□□ -1.73
TRX3	YCR083W	HAS1	Q03532	505 aa	Known RBP	4.25	□□□□□ -1.73
TRX3	YCR083W	TMA46	Q12000	345 aa	Known RBP	4.25	□□□□□ -1.73
TRX3	YCR083W	REC8	Q12188	680 aa		4.25	□□□□□ -1.73
TRX3	YCR083W	PHM7	Q12252	991 aa		4.25	□□□□□ -1.73
TRX3	YCR083W	TRP2	P00899	507 aa	Known RBP	4.24	□□□□□ -1.73
TRX3	YCR083W	HEM13	P11353	328 aa	Known RBP	4.24	□□□□□ -1.73
TRX3	YCR083W	RPN12	P32496	274 aa		4.24	□□□□□ -1.73
TRX3	YCR083W	YKR075C	P36155	307 aa		4.24	□□□□□ -1.73
TRX3	YCR083W	SPF1	P39986	1215 aa	Known RBP	4.24	□□□□□ -1.73
TRX3	YCR083W	SPO22	P40511	975 aa		4.24	□□□□□ -1.73
TRX3	YCR083W	TIM54	P47045	478 aa		4.24	□□□□□ -1.73
TRX3	YCR083W	PIL1	P53252	339 aa	Known RBP	4.24	□□□□□ -1.73
TRX3	YCR083W	UTP22	P53254	1237 aa	Predicted RBP	4.24	□□□□□ -1.73
TRX3	YCR083W	NAN1	Q02931	896 aa	Known RBP	4.24	□□□□□ -1.73
TRX3	YCR083W	FCP1	Q03254	732 aa		4.24	□□□□□ -1.73
TRX3	YCR083W	YOR131C	Q12486	218 aa		4.24	□□□□□ -1.73
TRX3	YCR083W	FIG2	P25653	1609 aa		4.24	□□□□□ -1.73
TRX3	YCR083W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms