RNA–Protein interactions for RNA: YCR073C

SSK22, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK22, Length 3,996 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK22YCR073C ADE2P21264 571 aaKnown RBP6.22□□□□□ -1.41
SSK22YCR073C VAN1P23642 535 aa6.22□□□□□ -1.41
SSK22YCR073C SLD2P34252 453 aa6.22□□□□□ -1.41
SSK22YCR073C ILV2P07342 687 aaKnown RBP6.22□□□□□ -1.41
SSK22YCR073C PUP2P32379 260 aa6.22□□□□□ -1.41
SSK22YCR073C LOS1P33418 1100 aaPredicted RBP6.22□□□□□ -1.41
SSK22YCR073C VPS30Q02948 557 aa6.22□□□□□ -1.41
SSK22YCR073C FAL1Q12099 399 aaKnown RBP6.22□□□□□ -1.41
SSK22YCR073C CDC8P00572 216 aa6.21□□□□□ -1.41
SSK22YCR073C CDC37P06101 506 aaKnown RBP6.21□□□□□ -1.41
SSK22YCR073C SUP45P12385 437 aaKnown RBP6.21□□□□□ -1.41
SSK22YCR073C MAK31P23059 88 aa6.21□□□□□ -1.41
SSK22YCR073C MCD4P36051 919 aa6.21□□□□□ -1.41
SSK22YCR073C SIT1P39980 628 aa6.21□□□□□ -1.41
SSK22YCR073C APL6P46682 809 aa6.21□□□□□ -1.41
SSK22YCR073C LCB5Q06147 687 aaKnown RBP6.21□□□□□ -1.41
SSK22YCR073C PUF4P25339 888 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
SSK22YCR073C SDS3P40505 327 aa6.21□□□□□ -1.42
SSK22YCR073C URB2P47108 1174 aa6.21□□□□□ -1.42
SSK22YCR073C ORM1P53224 222 aa6.21□□□□□ -1.42
SSK22YCR073C RET3P53600 189 aa6.21□□□□□ -1.42
SSK22YCR073C UTP5Q04177 643 aaKnown RBP6.21□□□□□ -1.42
SSK22YCR073C HCR1Q05775 265 aaKnown RBP6.21□□□□□ -1.42
SSK22YCR073C PNP1Q05788 311 aa6.21□□□□□ -1.42
SSK22YCR073C PRI1P10363 409 aa6.21□□□□□ -1.42
SSK22YCR073C LCB1P25045 558 aaKnown RBP6.21□□□□□ -1.42
SSK22YCR073C RME1P32338 300 aaKnown RBP6.21□□□□□ -1.42
SSK22YCR073C BIM1P40013 344 aa6.21□□□□□ -1.42
SSK22YCR073C YAP5P40574 245 aa6.21□□□□□ -1.42
SSK22YCR073C MGA2P40578 1113 aa6.21□□□□□ -1.42
SSK22YCR073C MMM1P41800 426 aa6.21□□□□□ -1.42
SSK22YCR073C IOC3P43596 787 aa6.21□□□□□ -1.42
SSK22YCR073C NAF1P53919 492 aaKnown RBP6.21□□□□□ -1.42
SSK22YCR073C RAM2P29703 316 aa6.2□□□□□ -1.42
SSK22YCR073C YMR196WQ04336 1088 aa6.2□□□□□ -1.42
SSK22YCR073C RUD3Q12234 484 aaKnown RBP6.2□□□□□ -1.42
SSK22YCR073C OCA6Q12454 224 aa6.2□□□□□ -1.42
SSK22YCR073C SNA3P14359 133 aa6.2□□□□□ -1.42
SSK22YCR073C MAD1P40957 749 aa6.2□□□□□ -1.42
SSK22YCR073C TAF10Q12030 206 aa6.2□□□□□ -1.42
SSK22YCR073C RAD5P32849 1169 aaPredicted RBP6.2□□□□□ -1.42
SSK22YCR073C SPP381P38282 291 aaPredicted RBP6.2□□□□□ -1.42
SSK22YCR073C MAK11P20484 414 aaKnown RBP6.19□□□□□ -1.42
SSK22YCR073C CCT2P39076 527 aaKnown RBP6.19□□□□□ -1.42
SSK22YCR073C IRC8P47046 822 aa6.19□□□□□ -1.42
SSK22YCR073C FMN1Q03778 218 aa6.19□□□□□ -1.42
SSK22YCR073C CYB2P00175 591 aa6.19□□□□□ -1.42
SSK22YCR073C RPG1P38249 964 aaKnown RBP6.19□□□□□ -1.42
SSK22YCR073C YIL001WP40560 513 aa6.19□□□□□ -1.42
SSK22YCR073C SEC26P41810 973 aaKnown RBP6.19□□□□□ -1.42
SSK22YCR073C SLK19Q08581 821 aaKnown RBP6.19□□□□□ -1.42
SSK22YCR073C GET4Q12125 312 aa6.19□□□□□ -1.42
SSK22YCR073C RIO1Q12196 484 aaKnown RBP6.19□□□□□ -1.42
SSK22YCR073C NYV1Q12255 253 aa6.19□□□□□ -1.42
SSK22YCR073C GCD6P32501 712 aaKnown RBP6.19□□□□□ -1.42
SSK22YCR073C ILM1P47155 203 aa6.19□□□□□ -1.42
SSK22YCR073C MDR1P53258 950 aa6.19□□□□□ -1.42
SSK22YCR073C YLR287CQ05881 355 aa6.19□□□□□ -1.42
SSK22YCR073C ESF1Q06344 628 aaKnown RBP6.19□□□□□ -1.42
SSK22YCR073C SRV2P17555 526 aaKnown RBP6.18□□□□□ -1.42
SSK22YCR073C ILV6P25605 309 aaKnown RBP6.18□□□□□ -1.42
SSK22YCR073C SRB4P32569 687 aa6.18□□□□□ -1.42
SSK22YCR073C EIS1Q05050 843 aaKnown RBP6.18□□□□□ -1.42
SSK22YCR073C TOS4Q06266 489 aa6.18□□□□□ -1.42
SSK22YCR073C BDF2Q07442 638 aa6.18□□□□□ -1.42
SSK22YCR073C TRK2P28584 889 aa6.18□□□□□ -1.42
SSK22YCR073C CDC11P32458 415 aa6.18□□□□□ -1.42
SSK22YCR073C AMN1P38285 549 aaPredicted RBP6.18□□□□□ -1.42
SSK22YCR073C SPC24Q04477 213 aa6.18□□□□□ -1.42
SSK22YCR073C ADY4Q05955 493 aa6.18□□□□□ -1.42
SSK22YCR073C STI1P15705 589 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42not detected
SSK22YCR073C SPS22P25380 463 aa6.18□□□□□ -1.42
SSK22YCR073C PYC2P32327 1180 aaKnown RBP6.18□□□□□ -1.42
SSK22YCR073C PET10P36139 283 aa6.18□□□□□ -1.42
SSK22YCR073C SAP185P40856 1058 aa6.18□□□□□ -1.42
SSK22YCR073C VPS70P47161 811 aa6.18□□□□□ -1.42
SSK22YCR073C INP52P50942 1183 aa6.18□□□□□ -1.42
SSK22YCR073C PUS2P53167 370 aa6.18□□□□□ -1.42
SSK22YCR073C UFD2P54860 961 aa6.18□□□□□ -1.42
SSK22YCR073C PLP2Q12017 286 aa6.18□□□□□ -1.42
SSK22YCR073C SPO21Q12411 609 aa6.18□□□□□ -1.42
SSK22YCR073C ATO2P32907 282 aa6.17□□□□□ -1.42
SSK22YCR073C BCK2P33306 851 aa6.17□□□□□ -1.42
SSK22YCR073C TRM2P33753 639 aa6.17□□□□□ -1.42
SSK22YCR073C SIP5P40210 489 aaKnown RBP6.17□□□□□ -1.42
SSK22YCR073C YJL107CP42947 387 aa6.17□□□□□ -1.42
SSK22YCR073C VTC2P43585 828 aa6.17□□□□□ -1.42
SSK22YCR073C FOX2Q02207 900 aaKnown RBP6.17□□□□□ -1.42
SSK22YCR073C CBF1P17106 351 aa6.17□□□□□ -1.42
SSK22YCR073C ADY2P25613 283 aa6.17□□□□□ -1.42
SSK22YCR073C LCP5P40079 357 aaPredicted RBP6.17□□□□□ -1.42
SSK22YCR073C PFK26P40433 827 aaKnown RBP6.17□□□□□ -1.42
SSK22YCR073C KAP114P53067 1004 aa6.17□□□□□ -1.42
SSK22YCR073C MFM1Q02783 413 aa6.17□□□□□ -1.42
SSK22YCR073C YMR114CQ04471 368 aaKnown RBP6.17□□□□□ -1.42
SSK22YCR073C MRD1Q06106 887 aaKnown RBP6.17□□□□□ -1.42
SSK22YCR073C APL1P27351 700 aa6.17□□□□□ -1.42
SSK22YCR073C FZO1P38297 855 aa6.17□□□□□ -1.42
SSK22YCR073C BRE2P43132 505 aa6.17□□□□□ -1.42
SSK22YCR073C GDE1Q02979 1223 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms