RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W SKG3Q06315 1026 aa6.55□□□□□ -1.36
SHM1YBR263W HVG1P0CE11 249 aa6.54□□□□□ -1.36
SHM1YBR263W TPM1P17536 199 aaKnown RBP6.54□□□□□ -1.36
SHM1YBR263W PEP3P27801 918 aa6.54□□□□□ -1.36
SHM1YBR263W IMP2'P32351 346 aa6.54□□□□□ -1.36
SHM1YBR263W ANP1P32629 500 aa6.54□□□□□ -1.36
SHM1YBR263W SIS2P36024 562 aa6.54□□□□□ -1.36
SHM1YBR263W CST26P38226 397 aa6.54□□□□□ -1.36
SHM1YBR263W AMN1P38285 549 aaPredicted RBP6.54□□□□□ -1.36
SHM1YBR263W ACS2P52910 683 aaKnown RBP6.54□□□□□ -1.36
SHM1YBR263W SNU71P53207 620 aaKnown RBP6.54□□□□□ -1.36
SHM1YBR263W MCA1Q08601 432 aa6.54□□□□□ -1.36
SHM1YBR263W CHS3P29465 1165 aa6.53□□□□□ -1.36
SHM1YBR263W ACA1P39970 489 aa6.53□□□□□ -1.36
SHM1YBR263W LAP2Q10740 671 aa6.53□□□□□ -1.36
SHM1YBR263W GIN4Q12263 1142 aa6.53□□□□□ -1.36
SHM1YBR263W RIT1P23796 513 aa6.53□□□□□ -1.36
SHM1YBR263W BSD2P38356 321 aa6.53□□□□□ -1.36
SHM1YBR263W VPS8P39702 1274 aa6.53□□□□□ -1.36
SHM1YBR263W TIF4631P39935 952 aaKnown RBP6.53□□□□□ -1.36
SHM1YBR263W SPO22P40511 975 aa6.53□□□□□ -1.36
SHM1YBR263W ECM23Q02710 187 aa6.53□□□□□ -1.36
SHM1YBR263W KRS1P15180 591 aaKnown RBP6.52□□□□□ -1.37
SHM1YBR263W ACE2P21192 770 aa6.52□□□□□ -1.37
SHM1YBR263W PHO87P25360 923 aa6.52□□□□□ -1.37
SHM1YBR263W TAT1P38085 619 aa6.52□□□□□ -1.37
SHM1YBR263W KTR7P40504 517 aa6.52□□□□□ -1.37
SHM1YBR263W LSB6P42951 607 aa6.52□□□□□ -1.37
SHM1YBR263W PRY1P47032 299 aa6.52□□□□□ -1.37
SHM1YBR263W TUS1Q06412 1307 aa6.51□□□□□ -1.37
SHM1YBR263W FBP1P09201 348 aa6.51□□□□□ -1.37
SHM1YBR263W MAK31P23059 88 aa6.51□□□□□ -1.37
SHM1YBR263W VID28P40547 921 aa6.51□□□□□ -1.37
SHM1YBR263W KRI1P42846 591 aaKnown RBP6.51□□□□□ -1.37
SHM1YBR263W MTO1P53070 669 aa6.51□□□□□ -1.37
SHM1YBR263W HEH2Q03281 663 aa6.51□□□□□ -1.37
SHM1YBR263W MYO5Q04439 1219 aaKnown RBP6.51□□□□□ -1.37
SHM1YBR263W EST2Q06163 884 aa6.51□□□□□ -1.37
SHM1YBR263W TFC6Q06339 672 aa6.51□□□□□ -1.37
SHM1YBR263W ESF1Q06344 628 aaKnown RBP6.51□□□□□ -1.37
SHM1YBR263W SAM2P19358 384 aaKnown RBP6.5□□□□□ -1.37
SHM1YBR263W OCT1P35999 772 aa6.5□□□□□ -1.37
SHM1YBR263W EBP2P36049 427 aaKnown RBP6.5□□□□□ -1.37
SHM1YBR263W CSM2P40465 213 aa6.5□□□□□ -1.37
SHM1YBR263W YIR014WP40570 242 aa6.5□□□□□ -1.37
SHM1YBR263W RPT6Q01939 405 aaKnown RBP6.5□□□□□ -1.37
SHM1YBR263W UTP4Q06679 776 aaKnown RBP6.5□□□□□ -1.37
SHM1YBR263W PRK1P40494 810 aa6.49□□□□□ -1.37
SHM1YBR263W SKP1P52286 194 aa6.49□□□□□ -1.37
SHM1YBR263W DUS1P53759 423 aaKnown RBP6.49□□□□□ -1.37
SHM1YBR263W FOL1P53848 824 aa6.49□□□□□ -1.37
SHM1YBR263W RBA50Q04418 439 aa6.49□□□□□ -1.37
SHM1YBR263W SUB2Q07478 446 aaKnown RBP6.49□□□□□ -1.37
SHM1YBR263W NUC1P08466 329 aa6.48□□□□□ -1.37
SHM1YBR263W RNR2P09938 399 aaKnown RBP6.48□□□□□ -1.37
SHM1YBR263W HAP4P14064 554 aa6.48□□□□□ -1.37
SHM1YBR263W SRP54P20424 541 aaKnown RBP6.48□□□□□ -1.37
SHM1YBR263W RPL8BP29453 256 aaKnown RBP6.48□□□□□ -1.37
SHM1YBR263W MOT2P34909 587 aaKnown RBP6.48□□□□□ -1.37
SHM1YBR263W APE3P37302 537 aaKnown RBP6.48□□□□□ -1.37
SHM1YBR263W VPS30Q02948 557 aa6.48□□□□□ -1.37
SHM1YBR263W RLF2Q12495 606 aa6.48□□□□□ -1.37
SHM1YBR263W TIF6Q12522 245 aaKnown RBP6.48□□□□□ -1.37
SHM1YBR263W HXT5P38695 592 aa6.47□□□□□ -1.37
SHM1YBR263W AKR1P39010 764 aa6.47□□□□□ -1.37
SHM1YBR263W PES4P39684 611 aa6.47□□□□□ -1.37
SHM1YBR263W NET1P47035 1189 aa6.47□□□□□ -1.37
SHM1YBR263W YML037CQ03703 340 aa6.47□□□□□ -1.37
SHM1YBR263W YOR111WQ99210 232 aa6.47□□□□□ -1.37
SHM1YBR263W GLT1Q12680 2145 aaKnown RBP6.47□□□□□ -1.37
SHM1YBR263W MATALPHA2P0CY08 210 aa6.47□□□□□ -1.37
SHM1YBR263W HMLALPHA2P0CY09 210 aa6.47□□□□□ -1.37
SHM1YBR263W KAP122P32767 1081 aa6.47□□□□□ -1.37
SHM1YBR263W SCD5P34758 872 aa6.47□□□□□ -1.37
SHM1YBR263W PGM2P37012 569 aaKnown RBP6.47□□□□□ -1.37
SHM1YBR263W LYS14P40971 790 aa6.47□□□□□ -1.37
SHM1YBR263W ALG2P43636 503 aa6.47□□□□□ -1.37
SHM1YBR263W SOL4P53315 255 aa6.47□□□□□ -1.37
SHM1YBR263W ARP5P53946 755 aa6.47□□□□□ -1.37
SHM1YBR263W UBX5Q06682 500 aa6.47□□□□□ -1.37
SHM1YBR263W CLF1Q12309 687 aaPredicted RBP6.47□□□□□ -1.37
SHM1YBR263W NHA1Q99271 985 aa6.47□□□□□ -1.37
SHM1YBR263W RNR3P21672 869 aaKnown RBP6.46□□□□□ -1.38
SHM1YBR263W PER1P25625 357 aa6.46□□□□□ -1.38
SHM1YBR263W MAL31P38156 614 aa6.46□□□□□ -1.38
SHM1YBR263W NCL1P38205 684 aaKnown RBP6.46□□□□□ -1.38
SHM1YBR263W ALG14P38242 237 aa6.46□□□□□ -1.38
SHM1YBR263W VAB2P40003 282 aa6.46□□□□□ -1.38
SHM1YBR263W EPL1P43572 832 aa6.46□□□□□ -1.38
SHM1YBR263W YKE2P52553 114 aa6.46□□□□□ -1.38
SHM1YBR263W MDM1Q01846 1127 aa6.46□□□□□ -1.38
SHM1YBR263W CUS1Q02554 436 aaPredicted RBP6.46□□□□□ -1.38
SHM1YBR263W SUE1Q06524 206 aa6.46□□□□□ -1.38
SHM1YBR263W DSE3Q08729 430 aa6.46□□□□□ -1.38
SHM1YBR263W CFT2Q12102 859 aaPredicted RBP6.46□□□□□ -1.38
SHM1YBR263W SRS2P12954 1174 aa6.45□□□□□ -1.38
SHM1YBR263W MCD4P36051 919 aa6.45□□□□□ -1.38
SHM1YBR263W CAB3P36076 571 aa6.45□□□□□ -1.38
SHM1YBR263W ERG7P38604 731 aa6.45□□□□□ -1.38
SHM1YBR263W VPS45P38932 577 aa6.45□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms