RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C SUP45P12385 437 aaKnown RBP7.76□□□□□ -1.17
LDB7YBL006C MSD1P15179 658 aaKnown RBP7.76□□□□□ -1.17
LDB7YBL006C CBP3P21560 335 aa7.76□□□□□ -1.17
LDB7YBL006C PRP22P24384 1145 aaKnown RBP7.76□□□□□ -1.17
LDB7YBL006C CDC48P25694 835 aaKnown RBP7.76□□□□□ -1.17
LDB7YBL006C URK1P27515 501 aa7.76□□□□□ -1.17
LDB7YBL006C SLX5P32828 619 aaKnown RBP7.76□□□□□ -1.17
LDB7YBL006C ORC6P38826 435 aa7.76□□□□□ -1.17
LDB7YBL006C FIS1P40515 155 aa7.76□□□□□ -1.17
LDB7YBL006C YNL034WP53963 612 aa7.76□□□□□ -1.17
LDB7YBL006C YNL018CP53976 612 aa7.76□□□□□ -1.17
LDB7YBL006C CSM3Q04659 317 aa7.76□□□□□ -1.17
LDB7YBL006C MAG2Q06436 670 aaKnown RBP7.76□□□□□ -1.17
LDB7YBL006C CEX1Q12453 761 aa7.76□□□□□ -1.17
LDB7YBL006C FAB1P34756 2278 aa7.76□□□□□ -1.17
LDB7YBL006C CLN3P13365 580 aa7.75□□□□□ -1.17
LDB7YBL006C POL3P15436 1097 aa7.75□□□□□ -1.17
LDB7YBL006C IDI1P15496 288 aa7.75□□□□□ -1.17
LDB7YBL006C THR4P16120 514 aaKnown RBP7.75□□□□□ -1.17
LDB7YBL006C GSY1P23337 708 aa7.75□□□□□ -1.17
LDB7YBL006C DID4P36108 232 aa7.75□□□□□ -1.17
LDB7YBL006C SLX1P38324 304 aa7.75□□□□□ -1.17
LDB7YBL006C STB5P38699 743 aa7.75□□□□□ -1.17
LDB7YBL006C ATG32P40458 529 aa7.75□□□□□ -1.17
LDB7YBL006C ACF4P47129 309 aa7.75□□□□□ -1.17
LDB7YBL006C HEH2Q03281 663 aa7.75□□□□□ -1.17
LDB7YBL006C COQ9Q05779 260 aa7.75□□□□□ -1.17
LDB7YBL006C DAP1Q12091 152 aa7.75□□□□□ -1.17
LDB7YBL006C NCR1Q12200 1170 aa7.75□□□□□ -1.17
LDB7YBL006C ASF1P32447 279 aa7.74□□□□□ -1.17
LDB7YBL006C STT3P39007 718 aaKnown RBP7.74□□□□□ -1.17
LDB7YBL006C TGL3P40308 642 aa7.74□□□□□ -1.17
LDB7YBL006C GCV2P49095 1034 aa7.74□□□□□ -1.17
LDB7YBL006C ROD1Q02805 837 aa7.74□□□□□ -1.17
LDB7YBL006C PNG1Q02890 363 aa7.74□□□□□ -1.17
LDB7YBL006C TRS120Q04183 1289 aa7.74□□□□□ -1.17
LDB7YBL006C SLK19Q08581 821 aaKnown RBP7.74□□□□□ -1.17
LDB7YBL006C YHL017WP38745 532 aa7.73□□□□□ -1.17
LDB7YBL006C EAF5P39995 279 aa7.73□□□□□ -1.17
LDB7YBL006C SMC5Q08204 1093 aa7.73□□□□□ -1.17
LDB7YBL006C GET3Q12154 354 aaKnown RBP7.73□□□□□ -1.17
LDB7YBL006C HIF1Q12373 385 aa7.73□□□□□ -1.17
LDB7YBL006C PRC1P00729 532 aa7.72□□□□□ -1.17
LDB7YBL006C SRD1P09007 221 aa7.72□□□□□ -1.17
LDB7YBL006C RNR2P09938 399 aaKnown RBP7.72□□□□□ -1.17
LDB7YBL006C TIF1P10081 395 aaKnown RBP7.72□□□□□ -1.17
LDB7YBL006C ADE2P21264 571 aaKnown RBP7.72□□□□□ -1.17
LDB7YBL006C RIM101P33400 625 aa7.72□□□□□ -1.17
LDB7YBL006C UBX7P38349 436 aa7.72□□□□□ -1.17
LDB7YBL006C BUD6P41697 788 aa7.72□□□□□ -1.17
LDB7YBL006C YGR153WP48238 217 aa7.72□□□□□ -1.17
LDB7YBL006C YNR014WP53719 212 aa7.72□□□□□ -1.17
LDB7YBL006C YLR455WQ06188 304 aa7.72□□□□□ -1.17
LDB7YBL006C MMR1Q06324 491 aa7.72□□□□□ -1.17
LDB7YBL006C HFI1Q12060 488 aa7.72□□□□□ -1.17
LDB7YBL006C SYN8P31377 255 aa7.71□□□□□ -1.18
LDB7YBL006C BUD2P33314 1104 aa7.71□□□□□ -1.18
LDB7YBL006C APN2P38207 520 aa7.71□□□□□ -1.18
LDB7YBL006C YAP1801P38856 637 aa7.71□□□□□ -1.18
LDB7YBL006C OYE3P41816 400 aaPredicted RBP7.71□□□□□ -1.18
LDB7YBL006C CTF18P49956 741 aa7.71□□□□□ -1.18
LDB7YBL006C PGA2P53903 129 aa7.71□□□□□ -1.18
LDB7YBL006C FUS2Q05670 677 aa7.71□□□□□ -1.18
LDB7YBL006C DCS2Q12123 353 aa7.71□□□□□ -1.18
LDB7YBL006C TIP41Q12199 356 aa7.71□□□□□ -1.18
LDB7YBL006C FMP27Q06179 2628 aa7.7□□□□□ -1.18
LDB7YBL006C WHI2P12611 486 aa7.7□□□□□ -1.18
LDB7YBL006C TCP1P12612 559 aaKnown RBP7.7□□□□□ -1.18
LDB7YBL006C TMT1P32643 299 aa7.7□□□□□ -1.18
LDB7YBL006C YHL026CP38740 315 aa7.7□□□□□ -1.18
LDB7YBL006C BUD16P39988 312 aa7.7□□□□□ -1.18
LDB7YBL006C ROG3P43602 733 aa7.7□□□□□ -1.18
LDB7YBL006C JJJ3P47138 172 aa7.7□□□□□ -1.18
LDB7YBL006C ENT3P47160 408 aa7.7□□□□□ -1.18
LDB7YBL006C YNL134CP53912 376 aaKnown RBP7.7□□□□□ -1.18
LDB7YBL006C MAP1Q01662 387 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
LDB7YBL006C YLH47Q06493 454 aa7.7□□□□□ -1.18
LDB7YBL006C PCD1Q12524 340 aa7.7□□□□□ -1.18
LDB7YBL006C HSP82P02829 709 aaKnown RBP7.69□□□□□ -1.18
LDB7YBL006C BCH2P36122 765 aa7.69□□□□□ -1.18
LDB7YBL006C RDH54P38086 958 aa7.69□□□□□ -1.18
LDB7YBL006C ESL1P40456 1118 aa7.69□□□□□ -1.18
LDB7YBL006C FYV10P40492 516 aa7.69□□□□□ -1.18
LDB7YBL006C ULP2P40537 1034 aaPredicted RBP7.69□□□□□ -1.18
LDB7YBL006C FAF1P40546 346 aaPredicted RBP7.69□□□□□ -1.18
LDB7YBL006C YFL052WP43551 465 aa7.69□□□□□ -1.18
LDB7YBL006C AVT1P47082 602 aa7.69□□□□□ -1.18
LDB7YBL006C SMC6Q12749 1114 aa7.69□□□□□ -1.18
LDB7YBL006C ALG1P16661 449 aa7.68□□□□□ -1.18
LDB7YBL006C ADK2P26364 225 aa7.68□□□□□ -1.18
LDB7YBL006C RFS1P38234 210 aaKnown RBP7.68□□□□□ -1.18
LDB7YBL006C TPO2P53283 614 aa7.68□□□□□ -1.18
LDB7YBL006C SDA1P53313 767 aaKnown RBP7.68□□□□□ -1.18
LDB7YBL006C SPP1Q03012 353 aa7.68□□□□□ -1.18
LDB7YBL006C DOT1Q04089 582 aaKnown RBP7.68□□□□□ -1.18
LDB7YBL006C NOC3Q07896 663 aaPredicted RBP7.68□□□□□ -1.18
LDB7YBL006C PSK2Q08217 1101 aa7.68□□□□□ -1.18
LDB7YBL006C YOR296WQ08748 1289 aa7.68□□□□□ -1.18
LDB7YBL006C PTC5Q12511 572 aa7.68□□□□□ -1.18
LDB7YBL006C TUF1P02992 437 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms