RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C YPL066WQ12194 479 aa3.64□□□□□ -1.83
SPC72YAL047C GAL10P04397 699 aa3.64□□□□□ -1.83
SPC72YAL047C DBP2P24783 546 aaKnown RBP3.64□□□□□ -1.83
SPC72YAL047C ABD1P32783 436 aaPredicted RBP3.64□□□□□ -1.83
SPC72YAL047C SLA2P33338 968 aa3.64□□□□□ -1.83
SPC72YAL047C PBP1P53297 722 aaKnown RBP3.64□□□□□ -1.83
SPC72YAL047C GCN5Q03330 439 aa3.64□□□□□ -1.83
SPC72YAL047C ESC2Q06340 456 aa3.64□□□□□ -1.83
SPC72YAL047C ATG13Q06628 738 aa3.64□□□□□ -1.83
SPC72YAL047C ESC8Q08119 714 aa3.64□□□□□ -1.83
SPC72YAL047C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SPC72YAL047C PRI2P20457 528 aa3.63□□□□□ -1.83
SPC72YAL047C ACE2P21192 770 aa3.63□□□□□ -1.83
SPC72YAL047C ABZ1P37254 787 aaPredicted RBP3.63□□□□□ -1.83
SPC72YAL047C MEF2P39677 819 aa3.63□□□□□ -1.83
SPC72YAL047C SBA1P28707 216 aaKnown RBP3.62□□□□□ -1.83
SPC72YAL047C THI80P35202 319 aa3.62□□□□□ -1.83
SPC72YAL047C VAC8P39968 578 aa3.62□□□□□ -1.83
SPC72YAL047C YLR358CO13565 187 aa3.62□□□□□ -1.83
SPC72YAL047C SIP5P40210 489 aaKnown RBP3.62□□□□□ -1.83
SPC72YAL047C GTF1P53260 183 aaPredicted RBP3.62□□□□□ -1.83
SPC72YAL047C RXT3Q07458 294 aa3.62□□□□□ -1.83
SPC72YAL047C RIB2Q12362 591 aaKnown RBP3.62□□□□□ -1.83
SPC72YAL047C AGP1P25376 633 aa3.61□□□□□ -1.83
SPC72YAL047C SAH1P39954 449 aaKnown RBP3.61□□□□□ -1.83
SPC72YAL047C HFM1P51979 1187 aa3.61□□□□□ -1.83
SPC72YAL047C ALD6P54115 500 aaKnown RBP3.61□□□□□ -1.83
SPC72YAL047C YDR132CQ03900 495 aa3.61□□□□□ -1.83
SPC72YAL047C SIZ1Q04195 904 aa3.61□□□□□ -1.83
SPC72YAL047C OPI10Q08202 246 aa3.61□□□□□ -1.83
SPC72YAL047C OSW2Q12202 724 aa3.61□□□□□ -1.83
SPC72YAL047C ENA1P13587 1091 aa3.6□□□□□ -1.83
SPC72YAL047C YCR015CP25616 317 aa3.6□□□□□ -1.83
SPC72YAL047C FLR1P38124 548 aa3.6□□□□□ -1.83
SPC72YAL047C GIP4P39732 760 aa3.6□□□□□ -1.83
SPC72YAL047C ENA2Q01896 1091 aa3.6□□□□□ -1.83
SPC72YAL047C SRP1Q02821 542 aaKnown RBP3.6□□□□□ -1.83
SPC72YAL047C PLB2Q03674 706 aa3.6□□□□□ -1.83
SPC72YAL047C GPB1Q08886 897 aa3.6□□□□□ -1.83
SPC72YAL047C ENA5Q12691 1091 aa3.6□□□□□ -1.83
SPC72YAL047C MBP1P39678 833 aa3.6□□□□□ -1.83
SPC72YAL047C NOP7P53261 605 aaKnown RBP3.6□□□□□ -1.83
SPC72YAL047C MSC2Q03455 724 aa3.6□□□□□ -1.83
SPC72YAL047C SRM1P21827 482 aa3.59□□□□□ -1.83
SPC72YAL047C ZRG8P40021 1076 aa3.59□□□□□ -1.83
SPC72YAL047C DUS3Q06053 668 aaKnown RBP3.59□□□□□ -1.83
SPC72YAL047C ACK1Q07622 623 aaPredicted RBP3.59□□□□□ -1.83
SPC72YAL047C PRE10P21242 288 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
SPC72YAL047C PPH3P32345 308 aa3.58□□□□□ -1.84
SPC72YAL047C VBA5P36172 582 aa3.58□□□□□ -1.84
SPC72YAL047C PAM1P37304 830 aaKnown RBP3.58□□□□□ -1.84
SPC72YAL047C TAF1P46677 1066 aa3.58□□□□□ -1.84
SPC72YAL047C TPO2P53283 614 aa3.58□□□□□ -1.84
SPC72YAL047C CLU1Q03690 1277 aaKnown RBP3.58□□□□□ -1.84
SPC72YAL047C SHE9Q04172 456 aa3.58□□□□□ -1.84
SPC72YAL047C HRQ1Q05549 1077 aa3.58□□□□□ -1.84
SPC72YAL047C TDA5Q06417 326 aaKnown RBP3.58□□□□□ -1.84
SPC72YAL047C MDM38Q08179 573 aa3.58□□□□□ -1.84
SPC72YAL047C YLL058WQ12198 575 aa3.58□□□□□ -1.84
SPC72YAL047C MRP8P35719 219 aa3.58□□□□□ -1.84
SPC72YAL047C YKL069WP36088 180 aa3.58□□□□□ -1.84
SPC72YAL047C POA1P38218 177 aa3.58□□□□□ -1.84
SPC72YAL047C DUS4Q06063 367 aa3.58□□□□□ -1.84
SPC72YAL047C YDR306CQ06640 478 aa3.58□□□□□ -1.84
SPC72YAL047C WRS1Q12109 432 aaKnown RBP3.58□□□□□ -1.84
SPC72YAL047C RPP2AP05319 106 aaKnown RBP3.57□□□□□ -1.84
SPC72YAL047C DOM34P33309 386 aa3.57□□□□□ -1.84
SPC72YAL047C YAP1801P38856 637 aa3.57□□□□□ -1.84
SPC72YAL047C TAT2P38967 592 aa3.57□□□□□ -1.84
SPC72YAL047C MPT5P39016 859 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
SPC72YAL047C MND2P40577 368 aa3.57□□□□□ -1.84
SPC72YAL047C GCV2P49095 1034 aa3.57□□□□□ -1.84
SPC72YAL047C EMC1P25574 760 aa3.56□□□□□ -1.84
SPC72YAL047C CDC20P26309 610 aa3.56□□□□□ -1.84
SPC72YAL047C FUN30P31380 1131 aa3.56□□□□□ -1.84
SPC72YAL047C PSP2P50109 593 aaKnown RBP3.56□□□□□ -1.84
SPC72YAL047C SRT1Q03175 343 aa3.56□□□□□ -1.84
SPC72YAL047C YAP6Q03935 383 aa3.56□□□□□ -1.84
SPC72YAL047C YPR196WQ06595 470 aa3.56□□□□□ -1.84
SPC72YAL047C XYL2Q07993 356 aa3.56□□□□□ -1.84
SPC72YAL047C AAR2P32357 355 aaPredicted RBP3.56□□□□□ -1.84
SPC72YAL047C SRP101P32916 621 aa3.56□□□□□ -1.84
SPC72YAL047C PBY1P38254 753 aa3.56□□□□□ -1.84
SPC72YAL047C GIC1P38785 314 aa3.56□□□□□ -1.84
SPC72YAL047C CCC2P38995 1004 aa3.56□□□□□ -1.84
SPC72YAL047C MTC3P53077 123 aa3.56□□□□□ -1.84
SPC72YAL047C YGR012WP53206 393 aa3.56□□□□□ -1.84
SPC72YAL047C TMA10Q06177 86 aa3.56□□□□□ -1.84
SPC72YAL047C PRP9P19736 530 aaKnown RBP3.55□□□□□ -1.84
SPC72YAL047C CTS1P29029 562 aa3.55□□□□□ -1.84
SPC72YAL047C CDC12P32468 407 aaKnown RBP3.55□□□□□ -1.84
SPC72YAL047C YKL151CP36059 337 aa3.55□□□□□ -1.84
SPC72YAL047C SHM2P37291 469 aaKnown RBP3.55□□□□□ -1.84
SPC72YAL047C SPF1P39986 1215 aaKnown RBP3.55□□□□□ -1.84
SPC72YAL047C VPS62P53285 467 aa3.55□□□□□ -1.84
SPC72YAL047C TPO1Q07824 586 aa3.55□□□□□ -1.84
SPC72YAL047C HSF1P10961 833 aa3.54□□□□□ -1.84
SPC72YAL047C ECM21P38167 1117 aaKnown RBP3.54□□□□□ -1.84
SPC72YAL047C YER158CP40095 573 aa3.54□□□□□ -1.84
SPC72YAL047C IRR1P40541 1150 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms