RNA–Protein interactions for RNA: RDN18-2

RDN18-2, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-2, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-2RDN18-2 ISW1P38144 1129 aa11.23□□□□□ -0.61
RDN18-2RDN18-2 SIP3P38717 1229 aa11.23□□□□□ -0.61
RDN18-2RDN18-2 ROG3P43602 733 aa11.23□□□□□ -0.61
RDN18-2RDN18-2 ORC4P54791 529 aa11.23□□□□□ -0.61
RDN18-2RDN18-2 AAD16Q02895 342 aa11.23□□□□□ -0.61
RDN18-2RDN18-2 ATG20Q07528 640 aa11.23□□□□□ -0.61
RDN18-2RDN18-2 RPC53P25441 422 aa11.22□□□□□ -0.61
RDN18-2RDN18-2 SMF1P38925 575 aa11.22□□□□□ -0.61
RDN18-2RDN18-2 ULP2P40537 1034 aaPredicted RBP11.22□□□□□ -0.61
RDN18-2RDN18-2 CCM1P48237 864 aaPredicted RBP11.22□□□□□ -0.61
RDN18-2RDN18-2 TCO89Q08921 799 aa11.22□□□□□ -0.61
RDN18-2RDN18-2 PFK1P16861 987 aaKnown RBP11.21□□□□□ -0.61
RDN18-2RDN18-2 PWP2P25635 923 aaKnown RBP11.21□□□□□ -0.61
RDN18-2RDN18-2 BUD16P39988 312 aa11.21□□□□□ -0.61
RDN18-2RDN18-2 NBP1P52919 319 aaPredicted RBP11.21□□□□□ -0.61
RDN18-2RDN18-2 MAL13P53338 473 aa11.21□□□□□ -0.61
RDN18-2RDN18-2 NGL3Q03210 505 aa11.21□□□□□ -0.61
RDN18-2RDN18-2 FUS2Q05670 677 aa11.21□□□□□ -0.61
RDN18-2RDN18-2 PHR1P05066 565 aaKnown RBP RIP-Chip data11.21□□□□□ -0.62not detected
RDN18-2RDN18-2 HPR1P17629 752 aaKnown RBP11.21□□□□□ -0.62
RDN18-2RDN18-2 VHR2P40041 505 aa11.21□□□□□ -0.62
RDN18-2RDN18-2 NUP82P40368 713 aa11.21□□□□□ -0.62
RDN18-2RDN18-2 DIP5P53388 608 aa11.21□□□□□ -0.62
RDN18-2RDN18-2 SOV1Q04748 898 aa11.21□□□□□ -0.62
RDN18-2RDN18-2 ARP6Q12509 438 aa11.21□□□□□ -0.62
RDN18-2RDN18-2 SCP160P06105 1222 aaKnown RBP RIP-Chip data11.2□□□□□ -0.62not detected
RDN18-2RDN18-2 DAL7P21826 554 aa11.2□□□□□ -0.62
RDN18-2RDN18-2 PAP1P29468 568 aaKnown RBP11.2□□□□□ -0.62
RDN18-2RDN18-2 AVT3P36062 692 aa11.2□□□□□ -0.62
RDN18-2RDN18-2 UTP13Q05946 817 aaKnown RBP11.2□□□□□ -0.62
RDN18-2RDN18-2 MAK16P10962 306 aaPredicted RBP11.19□□□□□ -0.62
RDN18-2RDN18-2 SSB1P11484 613 aaKnown RBP11.19□□□□□ -0.62
RDN18-2RDN18-2 SSB2P40150 613 aaKnown RBP11.19□□□□□ -0.62
RDN18-2RDN18-2 OYE2Q03558 400 aaKnown RBP11.19□□□□□ -0.62
RDN18-2RDN18-2 ATG23Q06671 453 aa11.19□□□□□ -0.62
RDN18-2RDN18-2 CBP1P07252 654 aa11.19□□□□□ -0.62
RDN18-2RDN18-2 CDC60P26637 1090 aaKnown RBP11.19□□□□□ -0.62
RDN18-2RDN18-2 YEL043WP32618 956 aa11.19□□□□□ -0.62
RDN18-2RDN18-2 UGA4P32837 571 aa11.19□□□□□ -0.62
RDN18-2RDN18-2 XRS2P33301 854 aa11.19□□□□□ -0.62
RDN18-2RDN18-2 RRP1P35178 278 aaPredicted RBP11.19□□□□□ -0.62
RDN18-2RDN18-2 CCT4P39078 528 aaKnown RBP11.19□□□□□ -0.62
RDN18-2RDN18-2 WHI4Q07655 649 aaKnown RBP11.19□□□□□ -0.62
RDN18-2RDN18-2 SIL1Q08199 421 aa11.18□□□□□ -0.62
RDN18-2RDN18-2 PLP2Q12017 286 aa11.18□□□□□ -0.62
RDN18-2RDN18-2 SUP45P12385 437 aaKnown RBP11.17□□□□□ -0.62
RDN18-2RDN18-2 RPO26P20435 155 aa11.17□□□□□ -0.62
RDN18-2RDN18-2 APL1P27351 700 aa11.17□□□□□ -0.62
RDN18-2RDN18-2 HXT1P32465 570 aa11.17□□□□□ -0.62
RDN18-2RDN18-2 YEL1P34225 687 aa11.17□□□□□ -0.62
RDN18-2RDN18-2 PHO88P38264 188 aaPredicted RBP11.17□□□□□ -0.62
RDN18-2RDN18-2 SET5P38890 526 aaKnown RBP11.17□□□□□ -0.62
RDN18-2RDN18-2 NIT1P40447 199 aa11.17□□□□□ -0.62
RDN18-2RDN18-2 YGR117CP53270 476 aa11.17□□□□□ -0.62
RDN18-2RDN18-2 ESS1P22696 170 aa11.16□□□□□ -0.62
RDN18-2RDN18-2 SRB4P32569 687 aa11.16□□□□□ -0.62
RDN18-2RDN18-2 PGM2P37012 569 aaKnown RBP11.16□□□□□ -0.62
RDN18-2RDN18-2 FET4P40988 552 aa11.16□□□□□ -0.62
RDN18-2RDN18-2 YFL034WP43564 1073 aa11.16□□□□□ -0.62
RDN18-2RDN18-2 SOL4P53315 255 aa11.16□□□□□ -0.62
RDN18-2RDN18-2 CKI1P20485 582 aa11.16□□□□□ -0.62
RDN18-2RDN18-2 UBP11P36026 717 aa11.16□□□□□ -0.62
RDN18-2RDN18-2 YMR124WP39523 943 aaKnown RBP11.16□□□□□ -0.62
RDN18-2RDN18-2 MMM1P41800 426 aa11.16□□□□□ -0.62
RDN18-2RDN18-2 CTR1P49573 406 aa11.16□□□□□ -0.62
RDN18-2RDN18-2 GYL1Q04322 720 aa11.16□□□□□ -0.62
RDN18-2RDN18-2 YLR326WQ06170 240 aaKnown RBP11.16□□□□□ -0.62
RDN18-2RDN18-2 FAL1Q12099 399 aaKnown RBP11.16□□□□□ -0.62
RDN18-2RDN18-2 RPS9BP05755 195 aaKnown RBP11.15□□□□□ -0.62
RDN18-2RDN18-2 GLC3P32775 704 aa11.15□□□□□ -0.62
RDN18-2RDN18-2 KIC1P38692 1080 aa11.15□□□□□ -0.62
RDN18-2RDN18-2 SMC2P38989 1170 aaKnown RBP11.15□□□□□ -0.62
RDN18-2RDN18-2 ACA1P39970 489 aa11.15□□□□□ -0.62
RDN18-2RDN18-2 MVP1P40959 511 aaKnown RBP11.15□□□□□ -0.62
RDN18-2RDN18-2 TMA64Q04600 565 aaKnown RBP11.15□□□□□ -0.62
RDN18-2RDN18-2 GIN4Q12263 1142 aa11.15□□□□□ -0.62
RDN18-2RDN18-2 OSH2Q12451 1283 aa11.15□□□□□ -0.62
RDN18-2RDN18-2 RMP1Q12530 201 aa11.15□□□□□ -0.62
RDN18-2RDN18-2 GPD2P41911 440 aaKnown RBP11.14□□□□□ -0.63
RDN18-2RDN18-2 YPL277CQ08989 487 aa11.14□□□□□ -0.63
RDN18-2RDN18-2 ERG12P07277 443 aa11.14□□□□□ -0.63
RDN18-2RDN18-2 RAD18P10862 487 aa11.14□□□□□ -0.63
RDN18-2RDN18-2 PRP22P24384 1145 aaKnown RBP11.14□□□□□ -0.63
RDN18-2RDN18-2 SMC1P32908 1225 aa11.14□□□□□ -0.63
RDN18-2RDN18-2 TOF1P53840 1238 aa11.14□□□□□ -0.63
RDN18-2RDN18-2 SEC5P89102 971 aa11.14□□□□□ -0.63
RDN18-2RDN18-2 MLH2Q07980 695 aa11.14□□□□□ -0.63
RDN18-2RDN18-2 DAS2Q12084 232 aa11.14□□□□□ -0.63
RDN18-2RDN18-2 MED1Q12321 566 aa11.14□□□□□ -0.63
RDN18-2RDN18-2 BYE1P36106 594 aa11.13□□□□□ -0.63
RDN18-2RDN18-2 SAP1P39955 897 aaKnown RBP11.13□□□□□ -0.63
RDN18-2RDN18-2 SQS1P53866 767 aaKnown RBP11.13□□□□□ -0.63
RDN18-2RDN18-2 ARK1P53974 638 aa11.13□□□□□ -0.63
RDN18-2RDN18-2 ALD6P54115 500 aaKnown RBP11.13□□□□□ -0.63
RDN18-2RDN18-2 YML037CQ03703 340 aa11.13□□□□□ -0.63
RDN18-2RDN18-2 OPY2Q06810 360 aa11.13□□□□□ -0.63
RDN18-2RDN18-2 CLN3P13365 580 aa11.12□□□□□ -0.63
RDN18-2RDN18-2 MSH1P25846 959 aa11.12□□□□□ -0.63
RDN18-2RDN18-2 NIP100P33420 868 aa11.12□□□□□ -0.63
RDN18-2RDN18-2 YKL023WP36103 277 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 117.1 ms