RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 RAPGEF4Q8WZA2 1011 aa20.99■□□□□ 0.95
PHGDH-211ENST00000641213 ABCC6O95255 1503 aa20.99■□□□□ 0.95
PHGDH-211ENST00000641213 TNS3Q68CZ2 1445 aa20.99■□□□□ 0.95
PHGDH-211ENST00000641213 NPHP3Q7Z494 1330 aa20.98■□□□□ 0.95
PHGDH-211ENST00000641213 PRAMEF22A3QJZ6 481 aa20.98■□□□□ 0.95
PHGDH-211ENST00000641213 ERC2O15083 957 aa20.98■□□□□ 0.95
PHGDH-211ENST00000641213 PROSER3Q2NL68 480 aa20.98■□□□□ 0.95
PHGDH-211ENST00000641213 CADPS2Q86UW7 1296 aa20.98■□□□□ 0.95
PHGDH-211ENST00000641213 CIZ1Q9ULV3 898 aaPredicted RBP20.98■□□□□ 0.95
PHGDH-211ENST00000641213 RAB11FIP3O75154 756 aa20.97■□□□□ 0.95
PHGDH-211ENST00000641213 CABLES1Q8TDN4 633 aa20.97■□□□□ 0.95
PHGDH-211ENST00000641213 KDM6AO15550 1401 aaPredicted RBP20.97■□□□□ 0.95
PHGDH-211ENST00000641213 MEGF6O75095 1541 aa20.97■□□□□ 0.95
PHGDH-211ENST00000641213 PKD1L3Q7Z443 1732 aa20.96■□□□□ 0.95
PHGDH-211ENST00000641213 SRGAP3O43295 1099 aa20.96■□□□□ 0.95
PHGDH-211ENST00000641213 SURF6O75683 361 aaKnown RBP20.96■□□□□ 0.95
PHGDH-211ENST00000641213 TATP17735 454 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-211ENST00000641213 MAP3K2Q9Y2U5 619 aa20.96■□□□□ 0.95
PHGDH-211ENST00000641213 HSP90AA1P07900 732 aaKnown RBP20.95■□□□□ 0.94
PHGDH-211ENST00000641213 KSR2Q6VAB6 950 aa20.95■□□□□ 0.94
PHGDH-211ENST00000641213 AOX1Q06278 1338 aa20.95■□□□□ 0.94
PHGDH-211ENST00000641213 IL1RAPL2Q9NP60 686 aa20.95■□□□□ 0.94
PHGDH-211ENST00000641213 HYPKQ9NX55 129 aa20.95■□□□□ 0.94
PHGDH-211ENST00000641213 PHKG2P15735 406 aa20.94■□□□□ 0.94
PHGDH-211ENST00000641213 SLC52A2Q9HAB3 445 aa20.94■□□□□ 0.94
PHGDH-211ENST00000641213 SPG7Q9UQ90 795 aa20.94■□□□□ 0.94
PHGDH-211ENST00000641213 ALDH1L1O75891 902 aa20.93■□□□□ 0.94
PHGDH-211ENST00000641213 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.93■□□□□ 0.94
PHGDH-211ENST00000641213 SPATA31A3Q5VYP0 1347 aa20.93■□□□□ 0.94
PHGDH-211ENST00000641213 HSPA2P54652 639 aa20.93■□□□□ 0.94
PHGDH-211ENST00000641213 CHRNA2Q15822 529 aa20.93■□□□□ 0.94
PHGDH-211ENST00000641213 ZNF790Q6PG37 636 aa20.93■□□□□ 0.94
PHGDH-211ENST00000641213 RHPN1Q8TCX5 695 aa20.93■□□□□ 0.94
PHGDH-211ENST00000641213 FOXD4L1Q9NU39 408 aa20.93■□□□□ 0.94
PHGDH-211ENST00000641213 CSB-PGBD3P0DP91 1061 aa20.92■□□□□ 0.94
PHGDH-211ENST00000641213 ESYT1Q9BSJ8 1104 aa20.92■□□□□ 0.94
PHGDH-211ENST00000641213 DDX21Q9NR30 783 aaKnown RBP eCLIP20.92■□□□□ 0.94
PHGDH-211ENST00000641213 TRIM6-TRIM34B2RNG4 842 aa20.92■□□□□ 0.94
PHGDH-211ENST00000641213 SLC39A6Q13433 755 aa20.92■□□□□ 0.94
PHGDH-211ENST00000641213 NUTM1Q86Y26 1132 aa20.92■□□□□ 0.94
PHGDH-211ENST00000641213 RILPL2Q969X0 211 aa20.92■□□□□ 0.94
PHGDH-211ENST00000641213 CHMLP26374 656 aa20.91■□□□□ 0.94
PHGDH-211ENST00000641213 RAB3GAP1Q15042 981 aa20.91■□□□□ 0.94
PHGDH-211ENST00000641213 PDIA6Q15084 440 aa20.91■□□□□ 0.94
PHGDH-211ENST00000641213 TNPO1Q92973 898 aaKnown RBP20.91■□□□□ 0.94
PHGDH-211ENST00000641213 KIF1BPQ96EK5 621 aa20.91■□□□□ 0.94
PHGDH-211ENST00000641213 MTX1Q13505 466 aa20.9■□□□□ 0.94
PHGDH-211ENST00000641213 IFNL2Q8IZJ0 200 aa20.9■□□□□ 0.94
PHGDH-211ENST00000641213 NFATC2IPQ8NCF5 419 aa20.9■□□□□ 0.94
PHGDH-211ENST00000641213 C9orf78Q9NZ63 289 aaPredicted RBP20.9■□□□□ 0.94
PHGDH-211ENST00000641213 PLEKHG2Q9H7P9 1386 aa20.9■□□□□ 0.94
PHGDH-211ENST00000641213 UNC5CLQ8IV45 518 aa20.9■□□□□ 0.94
PHGDH-211ENST00000641213 MRC1P22897 1456 aa20.9■□□□□ 0.94
PHGDH-211ENST00000641213 CWF19L2Q2TBE0 894 aaKnown RBP20.89■□□□□ 0.93
PHGDH-211ENST00000641213 CPDO75976 1380 aa20.89■□□□□ 0.93
PHGDH-211ENST00000641213 HSP90AB4PQ58FF6 505 aa20.89■□□□□ 0.93
PHGDH-211ENST00000641213 DDX58O95786 925 aaKnown RBP20.88■□□□□ 0.93
PHGDH-211ENST00000641213 DDX11L8A8MPP1 907 aa20.87■□□□□ 0.93
PHGDH-211ENST00000641213 LINS1Q8NG48 757 aa20.87■□□□□ 0.93
PHGDH-211ENST00000641213 PI4K2BQ8TCG2 481 aa20.87■□□□□ 0.93
PHGDH-211ENST00000641213 STRCQ7RTU9 1775 aa20.87■□□□□ 0.93
PHGDH-211ENST00000641213 CYP27B1O15528 508 aa20.87■□□□□ 0.93
PHGDH-211ENST00000641213 ST18O60284 1047 aa20.87■□□□□ 0.93
PHGDH-211ENST00000641213 AIMP1Q12904 312 aaKnown RBP20.87■□□□□ 0.93
PHGDH-211ENST00000641213 HDAC5Q9UQL6 1122 aa20.87■□□□□ 0.93
PHGDH-211ENST00000641213 PARP4Q9UKK3 1724 aaKnown RBP20.86■□□□□ 0.93
PHGDH-211ENST00000641213 DCAF5Q96JK2 942 aa20.86■□□□□ 0.93
PHGDH-211ENST00000641213 TRAK2O60296 914 aa20.85■□□□□ 0.93
PHGDH-211ENST00000641213 UTYO14607 1347 aa20.85■□□□□ 0.93
PHGDH-211ENST00000641213 BRINP3Q76B58 766 aa20.85■□□□□ 0.93
PHGDH-211ENST00000641213 ZNF496Q96IT1 587 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-211ENST00000641213 AFDNP55196 1824 aaKnown RBP20.85■□□□□ 0.93
PHGDH-211ENST00000641213 GRM8O00222 908 aa20.84■□□□□ 0.93
PHGDH-211ENST00000641213 LAMB4A4D0S4 1761 aa20.84■□□□□ 0.93
PHGDH-211ENST00000641213 GBP4Q96PP9 640 aa20.84■□□□□ 0.93
PHGDH-211ENST00000641213 USP42Q9H9J4 1324 aaKnown RBP20.83■□□□□ 0.93
PHGDH-211ENST00000641213 MYL6BP14649 208 aa20.83■□□□□ 0.93
PHGDH-211ENST00000641213 OS9Q13438 667 aaPredicted RBP20.83■□□□□ 0.93
PHGDH-211ENST00000641213 ANO2Q9NQ90 1003 aa20.83■□□□□ 0.93
PHGDH-211ENST00000641213 MAP4K4O95819 1239 aaPredicted RBP20.82■□□□□ 0.92
PHGDH-211ENST00000641213 RIC3Q7Z5B4 369 aa20.82■□□□□ 0.92
PHGDH-211ENST00000641213 KAZALD1Q96I82 304 aa20.82■□□□□ 0.92
PHGDH-211ENST00000641213 SUCLG2Q96I99 432 aa20.82■□□□□ 0.92
PHGDH-211ENST00000641213 IGKV5-2P06315 115 aa20.82■□□□□ 0.92
PHGDH-211ENST00000641213 MCCP23508 829 aa20.82■□□□□ 0.92
PHGDH-211ENST00000641213 LARP1Q6PKG0 1096 aaKnown RBP20.82■□□□□ 0.92
PHGDH-211ENST00000641213 ARFGEF2Q9Y6D5 1785 aa20.82■□□□□ 0.92
PHGDH-211ENST00000641213 SSFA2P28290 1259 aa20.81■□□□□ 0.92
PHGDH-211ENST00000641213 TTC5Q8N0Z6 440 aa20.81■□□□□ 0.92
PHGDH-211ENST00000641213 PA2G4Q9UQ80 394 aaKnown RBP20.81■□□□□ 0.92
PHGDH-211ENST00000641213 GLI3P10071 1580 aa20.81■□□□□ 0.92
PHGDH-211ENST00000641213 TTC41PQ6P2S7 1318 aa20.81■□□□□ 0.92
PHGDH-211ENST00000641213 SNRPA1P09661 255 aaKnown RBP20.81■□□□□ 0.92
PHGDH-211ENST00000641213 ANAPC15P60006 121 aa20.81■□□□□ 0.92
PHGDH-211ENST00000641213 XAGE3Q8WTP9 111 aa20.81■□□□□ 0.92
PHGDH-211ENST00000641213 IL25Q9H293 177 aa20.81■□□□□ 0.92
PHGDH-211ENST00000641213 PALD1Q9ULE6 856 aa20.81■□□□□ 0.92
PHGDH-211ENST00000641213 USP16Q9Y5T5 823 aa20.81■□□□□ 0.92
PHGDH-211ENST00000641213 ABCA3Q99758 1704 aa20.81■□□□□ 0.92
PHGDH-211ENST00000641213 COPS6Q7L5N1 327 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms