RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, human

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LPP-222	ENST00000640853	EPB41L2	O43491	1005 aa	Known RBP	3.56	□□□□□ -1.84
LPP-222	ENST00000640853	HSPA2	P54652	639 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	MAP9	Q49MG5	647 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	CCDC191	Q8NCU4	936 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	INSR	P06213	1382 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	CCDC196	A0A1B0GTZ2	297 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	KIAA0754	O94854	1291 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	SFPQ	P23246	707 aa	Known RBP eCLIP	3.56	□□□□□ -1.84	2e-6	■■■■□ 26
LPP-222	ENST00000640853	DNAJC2	Q99543	621 aa	Known RBP	3.56	□□□□□ -1.84
LPP-222	ENST00000640853	SPATA31E1	Q6ZUB1	1445 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	GBP3	Q9H0R5	595 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	KANK3	Q6NY19	840 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	MRPL50	Q8N5N7	158 aa	Known RBP	3.56	□□□□□ -1.84
LPP-222	ENST00000640853	KIAA0586	Q9BVV6	1533 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	CAMK4	Q16566	473 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	MIS18A	Q9NYP9	233 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	TCEAL9	Q9UHQ7	104 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	STX1A	Q16623	288 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	LMBRD1	Q9NUN5	540 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	DMRT2	Q9Y5R5	561 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	TRO	Q12816	1431 aa	Predicted RBP	3.56	□□□□□ -1.84
LPP-222	ENST00000640853	TTC39A	Q5SRH9	613 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	ZKSCAN5	Q9Y2L8	839 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	SPDYE4	A6NLX3	237 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	SRRT	Q9BXP5	876 aa	Known RBP	3.56	□□□□□ -1.84
LPP-222	ENST00000640853	TFIP11	Q9UBB9	837 aa	Known RBP	3.56	□□□□□ -1.84
LPP-222	ENST00000640853	MX1	P20591	662 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	CABP4	P57796	275 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	PRPF40B	Q6NWY9	871 aa	Known RBP	3.56	□□□□□ -1.84
LPP-222	ENST00000640853	DDX11	Q96FC9	970 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	HYPK	Q9NX55	129 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	PTPRC	P08575	1304 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	CCDC69	A6NI79	296 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	USP8	P40818	1118 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	GDPD2	Q9HCC8	539 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	HMG20B	Q9P0W2	317 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	ABCC11	Q96J66	1382 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	GNAT3	A8MTJ3	354 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	FILIP1	Q7Z7B0	1213 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	AKAP2	Q9Y2D5	859 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	KIF5C	O60282	957 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	CEP135	Q66GS9	1140 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	YEATS4	O95619	227 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	STK3	Q13188	491 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	ODF2	Q5BJF6	829 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	FMNL2	Q96PY5	1086 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853	SPG7	Q9UQ90	795 aa		3.56	□□□□□ -1.84
LPP-222	ENST00000640853		H0YHG0	523 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	FOXO3	O43524	673 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	BMS1	Q14692	1282 aa	Known RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	TTC22	Q5TAA0	569 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	C9orf84	Q5VXU9	1444 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	SPA17	Q15506	151 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	PLEKHM2	Q8IWE5	1019 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	C17orf53	Q8N3J3	647 aa	Predicted RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	TUBB	P07437	444 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	TNNT1	P13805	278 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	TTLL5	Q6EMB2	1281 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	USHBP1	Q8N6Y0	703 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	PYM1	Q9BRP8	204 aa	Known RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	NUTM1	Q86Y26	1132 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	SMAP1	Q8IYB5	467 aa	Predicted RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	CCDC94	Q9BW85	323 aa	Predicted RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	LMNB1	P20700	586 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	HSP90AB2P	Q58FF8	381 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	KIF6	Q6ZMV9	814 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	CCAR1	Q8IX12	1150 aa	Known RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	STX6	O43752	255 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	CT47A1	Q5JQC4	288 aa	Predicted RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	KCNG1	Q9UIX4	513 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	GIMAP6	Q6P9H5	292 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	LARP1	Q6PKG0	1096 aa	Known RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	ZRANB1	Q9UGI0	708 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	ZNF500	O60304	480 aa	Predicted RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	MICALCL	Q6ZW33	695 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	BOLA2	Q9H3K6	86 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	GOLGA6L9	A6NEM1	432 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	HMGB2	P26583	209 aa	Known RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	POLR3G	O15318	223 aa	Predicted RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	KIF4B	Q2VIQ3	1234 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	DCTPP1	Q9H773	170 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	CLIP2	Q9UDT6	1046 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	TNN	Q9UQP3	1299 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	USO1	O60763	962 aa	Known RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	SOGA3	Q5TF21	947 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	CCDC102B	Q68D86	513 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	TMTC2	Q8N394	836 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	INTS4	Q96HW7	963 aa	Known RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	TIGD1	Q96MW7	591 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	C14orf93	Q9H972	538 aa	Known RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	GOLGA4	Q13439	2230 aa	Known RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	NUP133	Q8WUM0	1156 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	TTC12	Q9H892	705 aa	Predicted RBP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	FKBP4	Q02790	459 aa	Known RBP eCLIP	3.55	□□□□□ -1.84
LPP-222	ENST00000640853	TUBB2A	Q13885	445 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	NME9	Q86XW9	330 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	TUBB2B	Q9BVA1	445 aa		3.55	□□□□□ -1.84
LPP-222	ENST00000640853	WWC2	Q6AWC2	1192 aa		3.54	□□□□□ -1.84
LPP-222	ENST00000640853	TRMT1	Q9NXH9	659 aa	Known RBP	3.54	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms