RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 PROSER3Q2NL68 480 aa12.46□□□□□ -0.41
ATM-226ENST00000638443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.46□□□□□ -0.41
ATM-226ENST00000638443 COL22A1Q8NFW1 1626 aaPredicted RBP12.46□□□□□ -0.41
ATM-226ENST00000638443 MRC1P22897 1456 aa12.46□□□□□ -0.42
ATM-226ENST00000638443 CARD10Q9BWT7 1032 aa12.46□□□□□ -0.42
ATM-226ENST00000638443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.46□□□□□ -0.426e-8■■■■□ 22.7
ATM-226ENST00000638443 ATP10DQ9P241 1426 aa12.45□□□□□ -0.42
ATM-226ENST00000638443 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
ATM-226ENST00000638443 ADAMTS2O95450 1211 aa12.45□□□□□ -0.42
ATM-226ENST00000638443 FOXD4L5Q5VV16 416 aaPredicted RBP12.45□□□□□ -0.42
ATM-226ENST00000638443 FOXD4L4Q8WXT5 416 aaPredicted RBP12.45□□□□□ -0.42
ATM-226ENST00000638443 BACH2Q9BYV9 841 aa12.45□□□□□ -0.42
ATM-226ENST00000638443 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
ATM-226ENST00000638443 IL2RBP14784 551 aa12.44□□□□□ -0.42
ATM-226ENST00000638443 RBM25P49756 843 aaKnown RBP12.44□□□□□ -0.42
ATM-226ENST00000638443 ZNF790Q6PG37 636 aa12.44□□□□□ -0.42
ATM-226ENST00000638443 ZCRB1Q8TBF4 217 aaKnown RBP12.44□□□□□ -0.42
ATM-226ENST00000638443 DDX54Q8TDD1 881 aaKnown RBP12.44□□□□□ -0.42
ATM-226ENST00000638443 C8orf34Q49A92 452 aa12.44□□□□□ -0.42
ATM-226ENST00000638443 TAF7LQ5H9L4 462 aa12.44□□□□□ -0.42
ATM-226ENST00000638443 DCAF5Q96JK2 942 aa12.44□□□□□ -0.42
ATM-226ENST00000638443 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
ATM-226ENST00000638443 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
ATM-226ENST00000638443 GLI3P10071 1580 aa12.43□□□□□ -0.42
ATM-226ENST00000638443 COL14A1Q05707 1796 aaKnown RBP12.43□□□□□ -0.42
ATM-226ENST00000638443 PIP4K2AP48426 406 aaPredicted RBP12.43□□□□□ -0.42
ATM-226ENST00000638443 SMC5Q8IY18 1101 aa12.43□□□□□ -0.42
ATM-226ENST00000638443 ZNF496Q96IT1 587 aaPredicted RBP12.43□□□□□ -0.42
ATM-226ENST00000638443 NUTM2BA6NNL0 878 aaPredicted RBP12.43□□□□□ -0.42
ATM-226ENST00000638443 NUTM2EB1AL46 878 aaPredicted RBP12.43□□□□□ -0.42
ATM-226ENST00000638443 NUTM2AQ8IVF1 878 aaPredicted RBP12.43□□□□□ -0.42
ATM-226ENST00000638443 TOGARAM1Q9Y4F4 1720 aa12.42□□□□□ -0.42
ATM-226ENST00000638443 LNPKQ9C0E8 428 aa12.42□□□□□ -0.42
ATM-226ENST00000638443 SOS1Q07889 1333 aaPredicted RBP12.42□□□□□ -0.42
ATM-226ENST00000638443 PLCH1Q4KWH8 1693 aa12.42□□□□□ -0.42
ATM-226ENST00000638443 HOXB7P09629 217 aa12.41□□□□□ -0.42
ATM-226ENST00000638443 CABP4P57796 275 aa12.41□□□□□ -0.42
ATM-226ENST00000638443 CEP85Q6P2H3 762 aa12.41□□□□□ -0.42
ATM-226ENST00000638443 ADCY9O60503 1353 aa12.41□□□□□ -0.42
ATM-226ENST00000638443 UBAP1LF5GYI3 381 aa12.4□□□□□ -0.42
ATM-226ENST00000638443 CCT4P50991 539 aaKnown RBP12.4□□□□□ -0.42
ATM-226ENST00000638443 PI4KAP2A4QPH2 592 aa12.4□□□□□ -0.43
ATM-226ENST00000638443 PDIA6Q15084 440 aa12.4□□□□□ -0.43
ATM-226ENST00000638443 PI4KAP1Q8N8J0 262 aa12.4□□□□□ -0.43
ATM-226ENST00000638443 PLEKHG2Q9H7P9 1386 aa12.4□□□□□ -0.43
ATM-226ENST00000638443 N4BP2Q86UW6 1770 aaPredicted RBP12.4□□□□□ -0.43
ATM-226ENST00000638443 DISP2A7MBM2 1401 aa12.39□□□□□ -0.43
ATM-226ENST00000638443 TOM1O60784 492 aa12.39□□□□□ -0.43
ATM-226ENST00000638443 MYL6BP14649 208 aa12.39□□□□□ -0.43
ATM-226ENST00000638443 FAM161AQ3B820 660 aa12.39□□□□□ -0.43
ATM-226ENST00000638443 TTC5Q8N0Z6 440 aa12.39□□□□□ -0.43
ATM-226ENST00000638443 USP16Q9Y5T5 823 aa12.39□□□□□ -0.43
ATM-226ENST00000638443 PXDNLA1KZ92 1463 aa12.39□□□□□ -0.43
ATM-226ENST00000638443 HSP90AB1P08238 724 aaKnown RBP12.38□□□□□ -0.43
ATM-226ENST00000638443 NUCB1Q02818 461 aa12.38□□□□□ -0.43
ATM-226ENST00000638443 AIMP1Q12904 312 aaKnown RBP12.38□□□□□ -0.43
ATM-226ENST00000638443 CHMP4BQ9H444 224 aaKnown RBP12.38□□□□□ -0.43
ATM-226ENST00000638443 DBF4Q9UBU7 674 aaPredicted RBP12.38□□□□□ -0.43
ATM-226ENST00000638443 NRAPQ86VF7 1730 aa12.38□□□□□ -0.43
ATM-226ENST00000638443 ANKRD45Q5TZF3 282 aa12.38□□□□□ -0.43
ATM-226ENST00000638443 ANKRD44Q8N8A2 993 aa12.38□□□□□ -0.43
ATM-226ENST00000638443 CACNA1FO60840 1977 aa12.38□□□□□ -0.43
ATM-226ENST00000638443 CHD1LQ86WJ1 897 aa12.37□□□□□ -0.43
ATM-226ENST00000638443 DNAAF4Q8WXU2 420 aa12.37□□□□□ -0.43
ATM-226ENST00000638443 USP44Q9H0E7 712 aa12.37□□□□□ -0.43
ATM-226ENST00000638443 SLC24A3Q9HC58 644 aa12.37□□□□□ -0.43
ATM-226ENST00000638443 MAP3K2Q9Y2U5 619 aa12.37□□□□□ -0.43
ATM-226ENST00000638443 LRRFIP2Q9Y608 721 aaKnown RBP12.37□□□□□ -0.43
ATM-226ENST00000638443 KCPQ6ZWJ8 1503 aa12.37□□□□□ -0.43
ATM-226ENST00000638443 PAPPAQ13219 1627 aa12.36□□□□□ -0.43
ATM-226ENST00000638443 PTCD1O75127 700 aaKnown RBP12.36□□□□□ -0.43
ATM-226ENST00000638443 SEC24BO95487 1268 aa12.36□□□□□ -0.43
ATM-226ENST00000638443 NKX1-1Q15270 411 aaPredicted RBP12.36□□□□□ -0.43
ATM-226ENST00000638443 BEND3Q5T5X7 828 aa12.36□□□□□ -0.43
ATM-226ENST00000638443 PNMA6EA0A0J9YXQ4 647 aa12.35□□□□□ -0.43
ATM-226ENST00000638443 NBPF7P0C2Y1 421 aaPredicted RBP12.35□□□□□ -0.43
ATM-226ENST00000638443 CWF19L2Q2TBE0 894 aaKnown RBP12.35□□□□□ -0.43
ATM-226ENST00000638443 FMNL2Q96PY5 1086 aa12.35□□□□□ -0.43
ATM-226ENST00000638443 WNK3Q9BYP7 1800 aa12.35□□□□□ -0.43
ATM-226ENST00000638443 UBR2Q8IWV8 1755 aa12.35□□□□□ -0.43
ATM-226ENST00000638443 SMARCA5O60264 1052 aaPredicted RBP12.35□□□□□ -0.43
ATM-226ENST00000638443 GCC1Q96CN9 775 aa12.35□□□□□ -0.43
ATM-226ENST00000638443 SRCIN1Q9C0H9 1055 aa12.35□□□□□ -0.43
ATM-226ENST00000638443 DDX21Q9NR30 783 aaKnown RBP eCLIP12.35□□□□□ -0.43
ATM-226ENST00000638443 GNAI2P04899 355 aa12.34□□□□□ -0.43
ATM-226ENST00000638443 SNRPA1P09661 255 aaKnown RBP12.34□□□□□ -0.43
ATM-226ENST00000638443 LRP10Q7Z4F1 713 aa12.34□□□□□ -0.43
ATM-226ENST00000638443 LAMB4A4D0S4 1761 aa12.34□□□□□ -0.43
ATM-226ENST00000638443 ERVV-2B6SEH9 535 aa12.34□□□□□ -0.43
ATM-226ENST00000638443 RPAP2Q8IXW5 612 aaPredicted RBP12.34□□□□□ -0.43
ATM-226ENST00000638443 C16orf71Q8IYS4 520 aaPredicted RBP12.34□□□□□ -0.43
ATM-226ENST00000638443 OTUD7AQ8TE49 926 aaPredicted RBP12.34□□□□□ -0.43
ATM-226ENST00000638443 XAGE3Q8WTP9 111 aa12.34□□□□□ -0.43
ATM-226ENST00000638443 DCTPP1Q9H773 170 aa12.34□□□□□ -0.43
ATM-226ENST00000638443 UBTFL1P0CB47 393 aaPredicted RBP12.33□□□□□ -0.44
ATM-226ENST00000638443 HYPKQ9NX55 129 aa12.33□□□□□ -0.44
ATM-226ENST00000638443 EXOC6BQ9Y2D4 811 aa12.33□□□□□ -0.44
ATM-226ENST00000638443 SPATA31A1Q5TZJ5 1347 aa12.33□□□□□ -0.44
ATM-226ENST00000638443 TNS2Q63HR2 1409 aa12.33□□□□□ -0.44
ATM-226ENST00000638443 KSR2Q6VAB6 950 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms